data_5XJ6 # _model_server_result.job_id rKX-4me6STtBtPOxANEZIw _model_server_result.datetime_utc '2024-12-11 23:23:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xj6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 5XJ6 # _exptl.entry_id 5XJ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XJ6 _cell.length_a 42.148 _cell.length_b 53.772 _cell.length_c 87.688 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XJ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 350 n n P O2 PO4 sing 351 n n P O3 PO4 sing 352 n n P O4 PO4 sing 353 n n # _atom_sites.entry_id 5XJ6 _atom_sites.fract_transf_matrix[1][1] 0.023726 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018597 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G3P A 1 301 1 G3P G3P . C 3 OLC A 1 302 1 OLC OLC . D 3 OLC A 1 303 2 OLC OLC . E 3 OLC A 1 304 3 OLC OLC . F 3 OLC A 1 305 4 OLC OLC . G 4 PO4 A 1 306 1 PO4 PO4 . H 5 HOH A 1 401 17 HOH HOH . H 5 HOH A 2 402 12 HOH HOH . H 5 HOH A 3 403 6 HOH HOH . H 5 HOH A 4 404 2 HOH HOH . H 5 HOH A 5 405 8 HOH HOH . H 5 HOH A 6 406 4 HOH HOH . H 5 HOH A 7 407 15 HOH HOH . H 5 HOH A 8 408 7 HOH HOH . H 5 HOH A 9 409 3 HOH HOH . H 5 HOH A 10 410 9 HOH HOH . H 5 HOH A 11 411 5 HOH HOH . H 5 HOH A 12 412 10 HOH HOH . H 5 HOH A 13 413 14 HOH HOH . H 5 HOH A 14 414 16 HOH HOH . H 5 HOH A 15 415 13 HOH HOH . H 5 HOH A 16 416 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 4 51.94 16.245 98.91 1 67.76 ? P PO4 306 A 1 HETATM 2 O O1 PO4 . . . G 4 51.641 16.045 97.442 1 78.29 ? O1 PO4 306 A 1 HETATM 3 O O2 PO4 . . . G 4 53.435 16.236 99.145 1 72.27 ? O2 PO4 306 A 1 HETATM 4 O O3 PO4 . . . G 4 51.298 15.137 99.724 1 52.77 ? O3 PO4 306 A 1 HETATM 5 O O4 PO4 . . . G 4 51.396 17.584 99.336 1 56.62 ? O4 PO4 306 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #