data_5XJ9 # _model_server_result.job_id RXkL9k5Lh1m5oPH53lTFxQ _model_server_result.datetime_utc '2024-12-11 09:20:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xj9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 5XJ9 # _exptl.entry_id 5XJ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XJ9 _cell.length_a 58.339 _cell.length_b 97.986 _cell.length_c 83.308 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XJ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 323 n n P O2 PO4 sing 324 n n P O3 PO4 sing 325 n n P O4 PO4 sing 326 n n # _atom_sites.entry_id 5XJ9 _atom_sites.fract_transf_matrix[1][1] 0.017141 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010206 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012004 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 301 1 PO4 PO4 . C 2 PO4 A 1 302 2 PO4 PO4 . D 2 PO4 A 1 303 3 PO4 PO4 . E 2 PO4 A 1 304 4 PO4 PO4 . F 2 PO4 A 1 305 5 PO4 PO4 . G 3 78M A 1 306 2 78M 78M . H 3 78M A 1 307 3 78M 78M . I 3 78M A 1 308 4 78M 78M . J 3 78M A 1 309 5 78M 78M . K 3 78M A 1 310 6 78M 78M . L 3 78M A 1 311 7 78M 78M . M 3 78M A 1 312 8 78M 78M . N 3 78M A 1 313 9 78M 78M . O 4 HOH A 1 401 72 HOH HOH . O 4 HOH A 2 402 52 HOH HOH . O 4 HOH A 3 403 109 HOH HOH . O 4 HOH A 4 404 90 HOH HOH . O 4 HOH A 5 405 42 HOH HOH . O 4 HOH A 6 406 115 HOH HOH . O 4 HOH A 7 407 45 HOH HOH . O 4 HOH A 8 408 35 HOH HOH . O 4 HOH A 9 409 47 HOH HOH . O 4 HOH A 10 410 50 HOH HOH . O 4 HOH A 11 411 116 HOH HOH . O 4 HOH A 12 412 64 HOH HOH . O 4 HOH A 13 413 9 HOH HOH . O 4 HOH A 14 414 3 HOH HOH . O 4 HOH A 15 415 113 HOH HOH . O 4 HOH A 16 416 44 HOH HOH . O 4 HOH A 17 417 32 HOH HOH . O 4 HOH A 18 418 91 HOH HOH . O 4 HOH A 19 419 11 HOH HOH . O 4 HOH A 20 420 43 HOH HOH . O 4 HOH A 21 421 46 HOH HOH . O 4 HOH A 22 422 25 HOH HOH . O 4 HOH A 23 423 59 HOH HOH . O 4 HOH A 24 424 19 HOH HOH . O 4 HOH A 25 425 67 HOH HOH . O 4 HOH A 26 426 77 HOH HOH . O 4 HOH A 27 427 30 HOH HOH . O 4 HOH A 28 428 87 HOH HOH . O 4 HOH A 29 429 13 HOH HOH . O 4 HOH A 30 430 6 HOH HOH . O 4 HOH A 31 431 37 HOH HOH . O 4 HOH A 32 432 2 HOH HOH . O 4 HOH A 33 433 31 HOH HOH . O 4 HOH A 34 434 10 HOH HOH . O 4 HOH A 35 435 4 HOH HOH . O 4 HOH A 36 436 65 HOH HOH . O 4 HOH A 37 437 95 HOH HOH . O 4 HOH A 38 438 16 HOH HOH . O 4 HOH A 39 439 102 HOH HOH . O 4 HOH A 40 440 7 HOH HOH . O 4 HOH A 41 441 17 HOH HOH . O 4 HOH A 42 442 28 HOH HOH . O 4 HOH A 43 443 8 HOH HOH . O 4 HOH A 44 444 71 HOH HOH . O 4 HOH A 45 445 75 HOH HOH . O 4 HOH A 46 446 18 HOH HOH . O 4 HOH A 47 447 74 HOH HOH . O 4 HOH A 48 448 49 HOH HOH . O 4 HOH A 49 449 14 HOH HOH . O 4 HOH A 50 450 15 HOH HOH . O 4 HOH A 51 451 38 HOH HOH . O 4 HOH A 52 452 29 HOH HOH . O 4 HOH A 53 453 93 HOH HOH . O 4 HOH A 54 454 5 HOH HOH . O 4 HOH A 55 455 33 HOH HOH . O 4 HOH A 56 456 1 HOH HOH . O 4 HOH A 57 457 12 HOH HOH . O 4 HOH A 58 458 73 HOH HOH . O 4 HOH A 59 459 83 HOH HOH . O 4 HOH A 60 460 96 HOH HOH . O 4 HOH A 61 461 110 HOH HOH . O 4 HOH A 62 462 26 HOH HOH . O 4 HOH A 63 463 84 HOH HOH . O 4 HOH A 64 464 81 HOH HOH . O 4 HOH A 65 465 20 HOH HOH . O 4 HOH A 66 466 60 HOH HOH . O 4 HOH A 67 467 39 HOH HOH . O 4 HOH A 68 468 36 HOH HOH . O 4 HOH A 69 469 89 HOH HOH . O 4 HOH A 70 470 21 HOH HOH . O 4 HOH A 71 471 24 HOH HOH . O 4 HOH A 72 472 48 HOH HOH . O 4 HOH A 73 473 70 HOH HOH . O 4 HOH A 74 474 100 HOH HOH . O 4 HOH A 75 475 54 HOH HOH . O 4 HOH A 76 476 111 HOH HOH . O 4 HOH A 77 477 41 HOH HOH . O 4 HOH A 78 478 51 HOH HOH . O 4 HOH A 79 479 22 HOH HOH . O 4 HOH A 80 480 68 HOH HOH . O 4 HOH A 81 481 112 HOH HOH . O 4 HOH A 82 482 53 HOH HOH . O 4 HOH A 83 483 99 HOH HOH . O 4 HOH A 84 484 23 HOH HOH . O 4 HOH A 85 485 94 HOH HOH . O 4 HOH A 86 486 34 HOH HOH . O 4 HOH A 87 487 76 HOH HOH . O 4 HOH A 88 488 79 HOH HOH . O 4 HOH A 89 489 85 HOH HOH . O 4 HOH A 90 490 58 HOH HOH . O 4 HOH A 91 491 114 HOH HOH . O 4 HOH A 92 492 78 HOH HOH . O 4 HOH A 93 493 61 HOH HOH . O 4 HOH A 94 494 27 HOH HOH . O 4 HOH A 95 495 101 HOH HOH . O 4 HOH A 96 496 92 HOH HOH . O 4 HOH A 97 497 57 HOH HOH . O 4 HOH A 98 498 104 HOH HOH . O 4 HOH A 99 499 80 HOH HOH . O 4 HOH A 100 500 88 HOH HOH . O 4 HOH A 101 501 103 HOH HOH . O 4 HOH A 102 502 86 HOH HOH . O 4 HOH A 103 503 69 HOH HOH . O 4 HOH A 104 504 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 2 17.045 16.953 -16.793 1 14.25 ? P PO4 304 A 1 HETATM 2 O O1 PO4 . . . E 2 16.078 17.413 -17.866 1 12.53 ? O1 PO4 304 A 1 HETATM 3 O O2 PO4 . . . E 2 18.285 17.821 -16.751 1 12.75 ? O2 PO4 304 A 1 HETATM 4 O O3 PO4 . . . E 2 17.417 15.517 -17.067 1 12.53 ? O3 PO4 304 A 1 HETATM 5 O O4 PO4 . . . E 2 16.325 17.08 -15.46 1 13.84 ? O4 PO4 304 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #