data_5XKF
#
_model_server_result.job_id            nt1QgAwLh_ge3_lXbp73JA 
_model_server_result.datetime_utc      '2024-10-20 20:12:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5xkf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"T","auth_seq_id":503}' 
#
_entry.id    5XKF 
#
_exptl.entry_id    5XKF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              279.336 
_entity.id                          11 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-(4-methoxyphenyl)-N,2-dimethyl-quinazolin-4-amine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5XKF 
_cell.length_a            105.617 
_cell.length_b            158.572 
_cell.length_c            182.245 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5XKF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 11 N N N 
? 11 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? 
metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? 
metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? 
metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? 
metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? 
metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.817 ? 
metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? 
metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc10 H MG MG . A MG 502 1_555 U O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
metalc ? metalc11 H MG MG . A MG 502 1_555 U O HOH . A HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc12 H MG MG . A MG 502 1_555 U O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? 
metalc ? metalc13 H MG MG . A MG 502 1_555 V O HOH . B HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? 
metalc ? metalc14 B OE1 GLN 11 B GLN 11 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc15 K O1A GDP . B GDP 501 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc16 L MG MG . B MG 502 1_555 V O HOH . B HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? 
metalc ? metalc17 C OD1 ASP 39 C ASP 39 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc18 C O THR 41 C THR 41 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? 
metalc ? metalc19 C OG1 THR 41 C THR 41 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? 
metalc ? metalc20 C O GLY 44 C GLY 44 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc21 C OE1 GLU 55 C GLU 55 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? 
metalc ? metalc22 C OE2 GLU 55 C GLU 55 1_555 Q CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? 
metalc ? metalc23 O O1G GTP . C GTP 501 1_555 P MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
metalc ? metalc24 O O1B GTP . C GTP 501 1_555 P MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc25 P MG MG . C MG 502 1_555 W O HOH . C HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? 
metalc ? metalc26 P MG MG . C MG 502 1_555 W O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
metalc ? metalc27 P MG MG . C MG 502 1_555 W O HOH . C HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? 
metalc ? metalc28 P MG MG . C MG 502 1_555 W O HOH . C HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc29 R O1G GTP . D GTP 501 1_555 S MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? 
metalc ? metalc30 R O1B GTP . D GTP 501 1_555 S MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.865 ? 
metalc ? metalc31 S MG MG . D MG 502 1_555 X O HOH . D HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? 
#
_chem_comp.formula           'C17 H17 N3 O' 
_chem_comp.formula_weight    279.336 
_chem_comp.id                88U 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-(4-methoxyphenyl)-N,2-dimethyl-quinazolin-4-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 C11 88U sing 1 n n 
N13 C11 88U doub 2 n y 
N13 C14 88U sing 3 n y 
C11 N10 88U sing 4 n y 
C15 C14 88U doub 5 n y 
C15 C16 88U sing 6 n y 
C14 C19 88U sing 7 n y 
N10 C09 88U doub 8 n y 
C16 C17 88U doub 9 n y 
C19 C09 88U sing 10 n y 
C19 C18 88U doub 11 n y 
C09 N07 88U sing 12 n n 
C17 C18 88U sing 13 n y 
C08 N07 88U sing 14 n n 
N07 C06 88U sing 15 n n 
C20 C06 88U doub 16 n y 
C20 C21 88U sing 17 n y 
C06 C05 88U sing 18 n y 
C21 C03 88U doub 19 n y 
C05 C04 88U doub 20 n y 
C03 C04 88U sing 21 n y 
C03 O02 88U sing 22 n n 
C01 O02 88U sing 23 n n 
C21 H1 88U sing 24 n n 
C15 H2 88U sing 25 n n 
C12 H3 88U sing 26 n n 
C12 H4 88U sing 27 n n 
C12 H5 88U sing 28 n n 
C08 H6 88U sing 29 n n 
C08 H7 88U sing 30 n n 
C08 H8 88U sing 31 n n 
C05 H9 88U sing 32 n n 
C04 H10 88U sing 33 n n 
C01 H11 88U sing 34 n n 
C01 H12 88U sing 35 n n 
C01 H13 88U sing 36 n n 
C16 H14 88U sing 37 n n 
C17 H15 88U sing 38 n n 
C18 H16 88U sing 39 n n 
C20 H17 88U sing 40 n n 
#
_atom_sites.entry_id                     5XKF 
_atom_sites.fract_transf_matrix[1][1]    0.009468 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006306 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005487 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 5 GTP A 1 501 501 GTP GTP . 
H 6 MG A 1 502 502 MG MG . 
I 7 CA A 1 503 503 CA CA . 
J 8 GOL A 1 504 601 GOL GOL . 
K 9 GDP B 1 501 501 GDP GDP . 
L 6 MG B 1 502 502 MG MG . 
M 10 MES B 1 503 505 MES MES . 
N 11 88U B 1 504 2 88U M68 . 
O 5 GTP C 1 501 501 GTP GTP . 
P 6 MG C 1 502 502 MG MG . 
Q 7 CA C 1 503 504 CA CA . 
R 5 GTP D 1 501 501 GTP GTP . 
S 6 MG D 1 502 502 MG MG . 
T 11 88U D 1 503 1 88U M68 . 
U 12 HOH A 1 601 17 HOH HOH . 
U 12 HOH A 2 602 6 HOH HOH . 
U 12 HOH A 3 603 8 HOH HOH . 
U 12 HOH A 4 604 9 HOH HOH . 
V 12 HOH B 1 601 20 HOH HOH . 
V 12 HOH B 2 602 19 HOH HOH . 
V 12 HOH B 3 603 18 HOH HOH . 
V 12 HOH B 4 604 22 HOH HOH . 
V 12 HOH B 5 605 7 HOH HOH . 
V 12 HOH B 6 606 10 HOH HOH . 
V 12 HOH B 7 607 13 HOH HOH . 
V 12 HOH B 8 608 11 HOH HOH . 
V 12 HOH B 9 609 21 HOH HOH . 
V 12 HOH B 10 610 28 HOH HOH . 
V 12 HOH B 11 611 16 HOH HOH . 
W 12 HOH C 1 601 24 HOH HOH . 
W 12 HOH C 2 602 4 HOH HOH . 
W 12 HOH C 3 603 2 HOH HOH . 
W 12 HOH C 4 604 3 HOH HOH . 
W 12 HOH C 5 605 1 HOH HOH . 
W 12 HOH C 6 606 30 HOH HOH . 
W 12 HOH C 7 607 29 HOH HOH . 
W 12 HOH C 8 608 26 HOH HOH . 
W 12 HOH C 9 609 23 HOH HOH . 
W 12 HOH C 10 610 27 HOH HOH . 
W 12 HOH C 11 611 12 HOH HOH . 
X 12 HOH D 1 601 15 HOH HOH . 
X 12 HOH D 2 602 5 HOH HOH . 
X 12 HOH D 3 603 14 HOH HOH . 
X 12 HOH D 4 604 25 HOH HOH . 
Y 12 HOH E 1 201 31 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C21 88U . . . T 11 14.448 323.554 -18.15 1 49.65 ? C21 88U 503 D 1 
HETATM 2 C C15 88U . . . T 11 10.916 325.017 -23.319 1 56.85 ? C15 88U 503 D 1 
HETATM 3 C C14 88U . . . T 11 12.266 325.36 -23.162 1 57.44 ? C14 88U 503 D 1 
HETATM 4 N N13 88U . . . T 11 13.129 325.349 -24.324 1 58.42 ? N13 88U 503 D 1 
HETATM 5 C C12 88U . . . T 11 15.288 325.652 -25.392 1 58.83 ? C12 88U 503 D 1 
HETATM 6 C C11 88U . . . T 11 14.407 325.665 -24.212 1 58.44 ? C11 88U 503 D 1 
HETATM 7 C C08 88U . . . T 11 15.852 327.422 -20.615 1 52.97 ? C08 88U 503 D 1 
HETATM 8 C C06 88U . . . T 11 14.651 325.662 -19.333 1 51.77 ? C06 88U 503 D 1 
HETATM 9 C C09 88U . . . T 11 14.218 326.062 -21.772 1 55.9 ? C09 88U 503 D 1 
HETATM 10 C C05 88U . . . T 11 14.462 326.342 -18.133 1 51.32 ? C05 88U 503 D 1 
HETATM 11 C C04 88U . . . T 11 14.276 325.643 -16.951 1 50 ? C04 88U 503 D 1 
HETATM 12 C C03 88U . . . T 11 14.26 324.238 -16.96 1 49.89 ? C03 88U 503 D 1 
HETATM 13 C C01 88U . . . T 11 13.566 322.233 -15.75 1 49.8 ? C01 88U 503 D 1 
HETATM 14 O O02 88U . . . T 11 14.068 323.558 -15.701 1 49.64 ? O02 88U 503 D 1 
HETATM 15 N N07 88U . . . T 11 14.845 326.43 -20.577 1 52.85 ? N07 88U 503 D 1 
HETATM 16 N N10 88U . . . T 11 14.955 326.023 -22.911 1 57.73 ? N10 88U 503 D 1 
HETATM 17 C C16 88U . . . T 11 10.017 325.017 -22.18 1 56.32 ? C16 88U 503 D 1 
HETATM 18 C C17 88U . . . T 11 10.498 325.362 -20.92 1 56.78 ? C17 88U 503 D 1 
HETATM 19 C C18 88U . . . T 11 11.867 325.716 -20.748 1 56.6 ? C18 88U 503 D 1 
HETATM 20 C C19 88U . . . T 11 12.778 325.715 -21.876 1 57.21 ? C19 88U 503 D 1 
HETATM 21 C C20 88U . . . T 11 14.647 324.271 -19.348 1 50.86 ? C20 88U 503 D 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    36 
_model_server_stats.query_time_ms           436 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           21 
#