data_5XMO # _model_server_result.job_id FQe5OhfuYQWgnaj4xidY5w _model_server_result.datetime_utc '2024-12-03 12:00:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xmo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5XMO # _exptl.entry_id 5XMO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.71 _cell.angle_gamma 90 _cell.entry_id 5XMO _cell.length_a 93.17 _cell.length_b 41.16 _cell.length_c 34.83 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XMO _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 40 A HIS 40 1_555 B CU CU . A CU 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.039 ? metalc ? metalc2 A ND1 HIS 40 A HIS 40 1_555 B CU CU . A CU 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.972 ? metalc ? metalc3 A SG CYS 78 A CYS 78 1_555 B CU CU . A CU 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.063 ? metalc ? metalc4 A SG CYS 78 A CYS 78 1_555 B CU CU . A CU 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.257 ? metalc ? metalc5 A ND1 HIS 81 A HIS 81 1_555 B CU CU . A CU 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.009 ? metalc ? metalc6 A ND1 HIS 81 A HIS 81 1_555 B CU CU . A CU 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.074 ? metalc ? metalc7 A SD MET 86 A MET 86 1_555 B CU CU . A CU 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.53 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5XMO _atom_sites.fract_transf_matrix[1][1] 0.010733 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001644 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024295 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU A 1 201 201 CU CU . C 3 HOH A 1 301 301 HOH HOH . C 3 HOH A 2 302 302 HOH HOH . C 3 HOH A 3 303 303 HOH HOH . C 3 HOH A 4 304 304 HOH HOH . C 3 HOH A 5 305 305 HOH HOH . C 3 HOH A 6 306 310 HOH HOH . C 3 HOH A 7 307 306 HOH HOH . C 3 HOH A 8 308 307 HOH HOH . C 3 HOH A 9 309 311 HOH HOH . C 3 HOH A 10 310 308 HOH HOH . C 3 HOH A 11 311 309 HOH HOH . C 3 HOH A 12 312 312 HOH HOH . C 3 HOH A 13 313 314 HOH HOH . C 3 HOH A 14 314 318 HOH HOH . C 3 HOH A 15 315 317 HOH HOH . C 3 HOH A 16 316 320 HOH HOH . C 3 HOH A 17 317 319 HOH HOH . C 3 HOH A 18 318 313 HOH HOH . C 3 HOH A 19 319 315 HOH HOH . C 3 HOH A 20 320 322 HOH HOH . C 3 HOH A 21 321 321 HOH HOH . C 3 HOH A 22 322 324 HOH HOH . C 3 HOH A 23 323 323 HOH HOH . C 3 HOH A 24 324 334 HOH HOH . C 3 HOH A 25 325 329 HOH HOH . C 3 HOH A 26 326 325 HOH HOH . C 3 HOH A 27 327 330 HOH HOH . C 3 HOH A 28 328 328 HOH HOH . C 3 HOH A 29 329 332 HOH HOH . C 3 HOH A 30 330 327 HOH HOH . C 3 HOH A 31 331 337 HOH HOH . C 3 HOH A 32 332 331 HOH HOH . C 3 HOH A 33 333 335 HOH HOH . C 3 HOH A 34 334 333 HOH HOH . C 3 HOH A 35 335 339 HOH HOH . C 3 HOH A 36 336 338 HOH HOH . C 3 HOH A 37 337 336 HOH HOH . C 3 HOH A 38 338 341 HOH HOH . C 3 HOH A 39 339 326 HOH HOH . C 3 HOH A 40 340 345 HOH HOH . C 3 HOH A 41 341 340 HOH HOH . C 3 HOH A 42 342 346 HOH HOH . C 3 HOH A 43 343 343 HOH HOH . C 3 HOH A 44 344 342 HOH HOH . C 3 HOH A 45 345 347 HOH HOH . C 3 HOH A 46 346 344 HOH HOH . C 3 HOH A 47 347 348 HOH HOH . C 3 HOH A 48 348 349 HOH HOH . C 3 HOH A 49 349 351 HOH HOH . C 3 HOH A 50 350 350 HOH HOH . C 3 HOH A 51 351 352 HOH HOH . C 3 HOH A 52 352 354 HOH HOH . C 3 HOH A 53 353 358 HOH HOH . C 3 HOH A 54 354 355 HOH HOH . C 3 HOH A 55 355 353 HOH HOH . C 3 HOH A 56 356 356 HOH HOH . C 3 HOH A 57 357 357 HOH HOH . C 3 HOH A 58 358 359 HOH HOH . C 3 HOH A 59 359 361 HOH HOH . C 3 HOH A 60 360 362 HOH HOH . C 3 HOH A 61 361 363 HOH HOH . C 3 HOH A 62 362 364 HOH HOH . C 3 HOH A 63 363 360 HOH HOH . C 3 HOH A 64 364 365 HOH HOH . C 3 HOH A 65 365 366 HOH HOH . C 3 HOH A 66 366 372 HOH HOH . C 3 HOH A 67 367 370 HOH HOH . C 3 HOH A 68 368 368 HOH HOH . C 3 HOH A 69 369 371 HOH HOH . C 3 HOH A 70 370 367 HOH HOH . C 3 HOH A 71 371 369 HOH HOH . C 3 HOH A 72 372 374 HOH HOH . C 3 HOH A 73 373 386 HOH HOH . C 3 HOH A 74 374 375 HOH HOH . C 3 HOH A 75 375 376 HOH HOH . C 3 HOH A 76 376 378 HOH HOH . C 3 HOH A 77 377 377 HOH HOH . C 3 HOH A 78 378 373 HOH HOH . C 3 HOH A 79 379 380 HOH HOH . C 3 HOH A 80 380 316 HOH HOH . C 3 HOH A 81 381 382 HOH HOH . C 3 HOH A 82 382 381 HOH HOH . C 3 HOH A 83 383 379 HOH HOH . C 3 HOH A 84 384 383 HOH HOH . C 3 HOH A 85 385 384 HOH HOH . C 3 HOH A 86 386 387 HOH HOH . C 3 HOH A 87 387 388 HOH HOH . C 3 HOH A 88 388 389 HOH HOH . C 3 HOH A 89 389 390 HOH HOH . C 3 HOH A 90 390 391 HOH HOH . C 3 HOH A 91 391 393 HOH HOH . C 3 HOH A 92 392 392 HOH HOH . C 3 HOH A 93 393 396 HOH HOH . C 3 HOH A 94 394 395 HOH HOH . C 3 HOH A 95 395 394 HOH HOH . C 3 HOH A 96 396 385 HOH HOH . C 3 HOH A 97 397 397 HOH HOH . C 3 HOH A 98 398 399 HOH HOH . C 3 HOH A 99 399 400 HOH HOH . C 3 HOH A 100 400 401 HOH HOH . C 3 HOH A 101 401 403 HOH HOH . C 3 HOH A 102 402 402 HOH HOH . C 3 HOH A 103 403 398 HOH HOH . C 3 HOH A 104 404 404 HOH HOH . C 3 HOH A 105 405 405 HOH HOH . C 3 HOH A 106 406 408 HOH HOH . C 3 HOH A 107 407 406 HOH HOH . C 3 HOH A 108 408 407 HOH HOH . C 3 HOH A 109 409 411 HOH HOH . C 3 HOH A 110 410 410 HOH HOH . C 3 HOH A 111 411 409 HOH HOH . C 3 HOH A 112 412 412 HOH HOH . C 3 HOH A 113 413 413 HOH HOH . C 3 HOH A 114 414 414 HOH HOH . C 3 HOH A 115 415 415 HOH HOH . C 3 HOH A 116 416 416 HOH HOH . C 3 HOH A 117 417 417 HOH HOH . C 3 HOH A 118 418 418 HOH HOH . C 3 HOH A 119 419 419 HOH HOH . C 3 HOH A 120 420 420 HOH HOH . C 3 HOH A 121 421 421 HOH HOH . C 3 HOH A 122 422 423 HOH HOH . C 3 HOH A 123 423 422 HOH HOH . C 3 HOH A 124 424 424 HOH HOH . C 3 HOH A 125 425 425 HOH HOH . C 3 HOH A 126 426 428 HOH HOH . C 3 HOH A 127 427 427 HOH HOH . C 3 HOH A 128 428 426 HOH HOH . C 3 HOH A 129 429 430 HOH HOH . C 3 HOH A 130 430 429 HOH HOH . C 3 HOH A 131 431 431 HOH HOH . C 3 HOH A 132 432 432 HOH HOH . C 3 HOH A 133 433 433 HOH HOH . C 3 HOH A 134 434 434 HOH HOH . C 3 HOH A 135 435 435 HOH HOH . C 3 HOH A 136 436 436 HOH HOH . C 3 HOH A 137 437 438 HOH HOH . C 3 HOH A 138 438 437 HOH HOH . C 3 HOH A 139 439 439 HOH HOH . C 3 HOH A 140 440 440 HOH HOH . C 3 HOH A 141 441 441 HOH HOH . C 3 HOH A 142 442 442 HOH HOH . C 3 HOH A 143 443 443 HOH HOH . C 3 HOH A 144 444 444 HOH HOH . C 3 HOH A 145 445 446 HOH HOH . C 3 HOH A 146 446 445 HOH HOH . C 3 HOH A 147 447 448 HOH HOH . C 3 HOH A 148 448 447 HOH HOH . C 3 HOH A 149 449 449 HOH HOH . C 3 HOH A 150 450 450 HOH HOH . C 3 HOH A 151 451 451 HOH HOH . C 3 HOH A 152 452 452 HOH HOH . C 3 HOH A 153 453 454 HOH HOH . C 3 HOH A 154 454 453 HOH HOH . C 3 HOH A 155 455 455 HOH HOH . C 3 HOH A 156 456 456 HOH HOH . C 3 HOH A 157 457 457 HOH HOH . C 3 HOH A 158 458 458 HOH HOH . C 3 HOH A 159 459 460 HOH HOH . C 3 HOH A 160 460 461 HOH HOH . C 3 HOH A 161 461 459 HOH HOH . C 3 HOH A 162 462 465 HOH HOH . C 3 HOH A 163 463 463 HOH HOH . C 3 HOH A 164 464 462 HOH HOH . C 3 HOH A 165 465 466 HOH HOH . C 3 HOH A 166 466 464 HOH HOH . C 3 HOH A 167 467 469 HOH HOH . C 3 HOH A 168 468 470 HOH HOH . C 3 HOH A 169 469 471 HOH HOH . C 3 HOH A 170 470 467 HOH HOH . C 3 HOH A 171 471 468 HOH HOH . C 3 HOH A 172 472 474 HOH HOH . C 3 HOH A 173 473 472 HOH HOH . C 3 HOH A 174 474 473 HOH HOH . C 3 HOH A 175 475 475 HOH HOH . C 3 HOH A 176 476 477 HOH HOH . C 3 HOH A 177 477 478 HOH HOH . C 3 HOH A 178 478 476 HOH HOH . C 3 HOH A 179 479 479 HOH HOH . C 3 HOH A 180 480 480 HOH HOH . C 3 HOH A 181 481 481 HOH HOH . C 3 HOH A 182 482 482 HOH HOH . C 3 HOH A 183 483 484 HOH HOH . C 3 HOH A 184 484 483 HOH HOH . C 3 HOH A 185 485 485 HOH HOH . C 3 HOH A 186 486 486 HOH HOH . C 3 HOH A 187 487 489 HOH HOH . C 3 HOH A 188 488 490 HOH HOH . C 3 HOH A 189 489 491 HOH HOH . C 3 HOH A 190 490 488 HOH HOH . C 3 HOH A 191 491 492 HOH HOH . C 3 HOH A 192 492 493 HOH HOH . C 3 HOH A 193 493 494 HOH HOH . C 3 HOH A 194 494 495 HOH HOH . C 3 HOH A 195 495 496 HOH HOH . C 3 HOH A 196 496 497 HOH HOH . C 3 HOH A 197 497 487 HOH HOH . C 3 HOH A 198 498 498 HOH HOH . C 3 HOH A 199 499 499 HOH HOH . C 3 HOH A 200 500 500 HOH HOH . C 3 HOH A 201 501 501 HOH HOH . C 3 HOH A 202 502 503 HOH HOH . C 3 HOH A 203 503 502 HOH HOH . C 3 HOH A 204 504 504 HOH HOH . C 3 HOH A 205 505 505 HOH HOH . C 3 HOH A 206 506 506 HOH HOH . C 3 HOH A 207 507 507 HOH HOH . C 3 HOH A 208 508 508 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CU CU CU . A . B 2 12.296 -5.038 -4.923 0.5 9.53 ? CU CU 201 A 1 HETATM 2 CU CU CU . B . B 2 12.384 -4.584 -4.947 0.5 6.27 ? CU CU 201 A 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 38 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 578 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 2 #