data_5XNR
#
_model_server_result.job_id            r09UC2Te1gm6GxLmjNQRig 
_model_server_result.datetime_utc      '2024-10-19 16:24:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5xnr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":604}' 
#
_entry.id    5XNR 
#
_exptl.entry_id    5XNR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5XNR 
_cell.length_a            74.317 
_cell.length_b            74.317 
_cell.length_c            179.733 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5XNR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 158 A CYS 338 1_555 A SG CYS 175 A CYS 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc1 A O ASN 26 A ASN 206 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc2 A OD1 ASP 29 A ASP 209 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? 
metalc ? metalc3 A O ASN 31 A ASN 211 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc4 A O THR 34 A THR 214 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc5 A OG1 THR 34 A THR 214 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? 
metalc ? metalc6 A O THR 127 A THR 307 1_555 B CA CA . A CA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? 
metalc ? metalc7 A OD1 ASP 171 A ASP 351 1_555 C K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? 
metalc ? metalc8 A OD2 ASP 171 A ASP 351 1_555 C K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? 
metalc ? metalc9 A O THR 173 A THR 353 1_555 C K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? 
metalc ? metalc10 A OG1 THR 173 A THR 353 1_555 C K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? 
metalc ? metalc11 A OE2 GLU 177 A GLU 357 1_555 C K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 266 n n 
P O2 PO4 sing 267 n n 
P O3 PO4 sing 268 n n 
P O4 PO4 sing 269 n n 
#
_atom_sites.entry_id                     5XNR 
_atom_sites.fract_transf_matrix[1][1]    0.013456 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013456 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005564 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 601 1 CA CA . 
C 3 K A 1 602 2 K K . 
D 4 ACT A 1 603 3 ACT ACT . 
E 5 PO4 A 1 604 4 PO4 PO4 . 
F 6 HOH A 1 701 44 HOH HOH . 
F 6 HOH A 2 702 26 HOH HOH . 
F 6 HOH A 3 703 18 HOH HOH . 
F 6 HOH A 4 704 14 HOH HOH . 
F 6 HOH A 5 705 15 HOH HOH . 
F 6 HOH A 6 706 42 HOH HOH . 
F 6 HOH A 7 707 2 HOH HOH . 
F 6 HOH A 8 708 11 HOH HOH . 
F 6 HOH A 9 709 17 HOH HOH . 
F 6 HOH A 10 710 37 HOH HOH . 
F 6 HOH A 11 711 3 HOH HOH . 
F 6 HOH A 12 712 1 HOH HOH . 
F 6 HOH A 13 713 31 HOH HOH . 
F 6 HOH A 14 714 12 HOH HOH . 
F 6 HOH A 15 715 39 HOH HOH . 
F 6 HOH A 16 716 4 HOH HOH . 
F 6 HOH A 17 717 6 HOH HOH . 
F 6 HOH A 18 718 22 HOH HOH . 
F 6 HOH A 19 719 38 HOH HOH . 
F 6 HOH A 20 720 32 HOH HOH . 
F 6 HOH A 21 721 16 HOH HOH . 
F 6 HOH A 22 722 7 HOH HOH . 
F 6 HOH A 23 723 35 HOH HOH . 
F 6 HOH A 24 724 27 HOH HOH . 
F 6 HOH A 25 725 8 HOH HOH . 
F 6 HOH A 26 726 41 HOH HOH . 
F 6 HOH A 27 727 10 HOH HOH . 
F 6 HOH A 28 728 25 HOH HOH . 
F 6 HOH A 29 729 36 HOH HOH . 
F 6 HOH A 30 730 13 HOH HOH . 
F 6 HOH A 31 731 5 HOH HOH . 
F 6 HOH A 32 732 23 HOH HOH . 
F 6 HOH A 33 733 40 HOH HOH . 
F 6 HOH A 34 734 34 HOH HOH . 
F 6 HOH A 35 735 28 HOH HOH . 
F 6 HOH A 36 736 33 HOH HOH . 
F 6 HOH A 37 737 21 HOH HOH . 
F 6 HOH A 38 738 43 HOH HOH . 
F 6 HOH A 39 739 9 HOH HOH . 
F 6 HOH A 40 740 24 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . E 5 35.673 -42.081 73.751 1 50.73 ? P PO4 604 A 1 
HETATM 2 O O1 PO4 . . . E 5 35.721 -41.05 72.653 1 41.32 ? O1 PO4 604 A 1 
HETATM 3 O O2 PO4 . . . E 5 34.299 -42.008 74.403 1 47.64 ? O2 PO4 604 A 1 
HETATM 4 O O3 PO4 . . . E 5 35.934 -43.485 73.19 1 49.61 ? O3 PO4 604 A 1 
HETATM 5 O O4 PO4 . . . E 5 36.757 -41.818 74.776 1 44.31 ? O4 PO4 604 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           354 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           5 
#