data_5XP3 # _model_server_result.job_id AEAYT8zD_hU07EPmU1fGbQ _model_server_result.datetime_utc '2024-11-16 23:27:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xp3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":501}' # _entry.id 5XP3 # _exptl.entry_id 5XP3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XP3 _cell.length_a 105.168 _cell.length_b 157.964 _cell.length_c 181.408 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XP3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 9 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc2 A OD2 ASP 39 A ASP 39 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc4 A OG1 THR 41 A THR 41 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? metalc ? metalc5 A O GLY 44 A GLY 44 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc6 A OE1 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc7 A OE2 GLU 55 A GLU 55 1_555 I CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc8 G O1G GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc9 G O1B GTP . A GTP 501 1_555 H MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc10 H MG MG . A MG 502 1_555 T O HOH . A HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc11 H MG MG . A MG 502 1_555 T O HOH . A HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc12 H MG MG . A MG 502 1_555 T O HOH . A HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc13 H MG MG . A MG 502 1_555 T O HOH . A HOH 642 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc14 B OE1 GLN 11 B GLN 11 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc15 K O1A GDP . B GDP 501 1_555 L MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc16 L MG MG . B MG 502 1_555 U O HOH . B HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc17 L MG MG . B MG 502 1_555 U O HOH . B HOH 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc18 L MG MG . B MG 502 1_555 U O HOH . B HOH 652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc19 L MG MG . B MG 502 1_555 V O HOH . C HOH 678 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc20 C OD1 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc21 C OD2 ASP 39 C ASP 39 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc22 C O THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc23 C OG1 THR 41 C THR 41 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc24 C O GLY 44 C GLY 44 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc25 C OE1 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc26 C OE2 GLU 55 C GLU 55 1_555 P CA CA . C CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc27 N O1G GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc28 N O1B GTP . C GTP 501 1_555 O MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc29 O MG MG . C MG 502 1_555 V O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc30 O MG MG . C MG 502 1_555 V O HOH . C HOH 611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc31 O MG MG . C MG 502 1_555 V O HOH . C HOH 651 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc32 O MG MG . C MG 502 1_555 V O HOH . C HOH 665 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc33 P CA CA . C CA 503 1_555 V O HOH . C HOH 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc34 Q O1G GTP . D GTP 501 1_555 R MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc35 Q O1B GTP . D GTP 501 1_555 R MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.705 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 134 n n PB O2B GDP sing 135 n n PB O3B GDP sing 136 n n PB O3A GDP sing 137 n n O2B HOB2 GDP sing 138 n n O3B HOB3 GDP sing 139 n n O3A PA GDP sing 140 n n PA O1A GDP doub 141 n n PA O2A GDP sing 142 n n PA O5' GDP sing 143 n n O2A HOA2 GDP sing 144 n n O5' C5' GDP sing 145 n n C5' C4' GDP sing 146 n n C5' H5' GDP sing 147 n n C5' "H5''" GDP sing 148 n n C4' O4' GDP sing 149 n n C4' C3' GDP sing 150 n n C4' H4' GDP sing 151 n n O4' C1' GDP sing 152 n n C3' O3' GDP sing 153 n n C3' C2' GDP sing 154 n n C3' H3' GDP sing 155 n n O3' HO3' GDP sing 156 n n C2' O2' GDP sing 157 n n C2' C1' GDP sing 158 n n C2' H2' GDP sing 159 n n O2' HO2' GDP sing 160 n n C1' N9 GDP sing 161 n n C1' H1' GDP sing 162 n n N9 C8 GDP sing 163 n y N9 C4 GDP sing 164 n y C8 N7 GDP doub 165 n y C8 H8 GDP sing 166 n n N7 C5 GDP sing 167 n y C5 C6 GDP sing 168 n n C5 C4 GDP doub 169 n y C6 O6 GDP doub 170 n n C6 N1 GDP sing 171 n n N1 C2 GDP sing 172 n n N1 HN1 GDP sing 173 n n C2 N2 GDP sing 174 n n C2 N3 GDP doub 175 n n N2 HN21 GDP sing 176 n n N2 HN22 GDP sing 177 n n N3 C4 GDP sing 178 n n # _atom_sites.entry_id 5XP3 _atom_sites.fract_transf_matrix[1][1] 0.009509 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006331 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005512 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 5 GTP A 1 501 501 GTP GTP . H 6 MG A 1 502 502 MG MG . I 7 CA A 1 503 503 CA CA . J 8 GOL A 1 504 601 GOL GOL . K 9 GDP B 1 501 501 GDP GDP . L 6 MG B 1 502 502 MG MG . M 10 MES B 1 503 505 MES MES . N 5 GTP C 1 501 501 GTP GTP . O 6 MG C 1 502 502 MG MG . P 7 CA C 1 503 504 CA CA . Q 5 GTP D 1 501 501 GTP GTP . R 6 MG D 1 502 502 MG MG . S 11 ACP F 1 401 401 ACP ACP . T 12 HOH A 1 601 461 HOH HOH . T 12 HOH A 2 602 369 HOH HOH . T 12 HOH A 3 603 46 HOH HOH . T 12 HOH A 4 604 23 HOH HOH . T 12 HOH A 5 605 185 HOH HOH . T 12 HOH A 6 606 88 HOH HOH . T 12 HOH A 7 607 166 HOH HOH . T 12 HOH A 8 608 13 HOH HOH . T 12 HOH A 9 609 386 HOH HOH . T 12 HOH A 10 610 9 HOH HOH . T 12 HOH A 11 611 409 HOH HOH . T 12 HOH A 12 612 163 HOH HOH . T 12 HOH A 13 613 231 HOH HOH . T 12 HOH A 14 614 204 HOH HOH . T 12 HOH A 15 615 98 HOH HOH . T 12 HOH A 16 616 31 HOH HOH . T 12 HOH A 17 617 37 HOH HOH . T 12 HOH A 18 618 30 HOH HOH . T 12 HOH A 19 619 135 HOH HOH . T 12 HOH A 20 620 94 HOH HOH . T 12 HOH A 21 621 25 HOH HOH . T 12 HOH A 22 622 130 HOH HOH . T 12 HOH A 23 623 73 HOH HOH . T 12 HOH A 24 624 613 HOH HOH . T 12 HOH A 25 625 19 HOH HOH . T 12 HOH A 26 626 66 HOH HOH . T 12 HOH A 27 627 34 HOH HOH . T 12 HOH A 28 628 263 HOH HOH . T 12 HOH A 29 629 621 HOH HOH . T 12 HOH A 30 630 11 HOH HOH . T 12 HOH A 31 631 119 HOH HOH . T 12 HOH A 32 632 140 HOH HOH . T 12 HOH A 33 633 91 HOH HOH . T 12 HOH A 34 634 236 HOH HOH . T 12 HOH A 35 635 157 HOH HOH . T 12 HOH A 36 636 43 HOH HOH . T 12 HOH A 37 637 28 HOH HOH . T 12 HOH A 38 638 608 HOH HOH . T 12 HOH A 39 639 160 HOH HOH . T 12 HOH A 40 640 57 HOH HOH . T 12 HOH A 41 641 491 HOH HOH . T 12 HOH A 42 642 20 HOH HOH . T 12 HOH A 43 643 567 HOH HOH . T 12 HOH A 44 644 319 HOH HOH . T 12 HOH A 45 645 242 HOH HOH . T 12 HOH A 46 646 175 HOH HOH . T 12 HOH A 47 647 298 HOH HOH . T 12 HOH A 48 648 161 HOH HOH . T 12 HOH A 49 649 76 HOH HOH . T 12 HOH A 50 650 223 HOH HOH . T 12 HOH A 51 651 121 HOH HOH . T 12 HOH A 52 652 178 HOH HOH . T 12 HOH A 53 653 444 HOH HOH . T 12 HOH A 54 654 229 HOH HOH . T 12 HOH A 55 655 587 HOH HOH . T 12 HOH A 56 656 219 HOH HOH . T 12 HOH A 57 657 333 HOH HOH . T 12 HOH A 58 658 327 HOH HOH . T 12 HOH A 59 659 579 HOH HOH . T 12 HOH A 60 660 611 HOH HOH . T 12 HOH A 61 661 312 HOH HOH . T 12 HOH A 62 662 325 HOH HOH . U 12 HOH B 1 601 514 HOH HOH . U 12 HOH B 2 602 33 HOH HOH . U 12 HOH B 3 603 142 HOH HOH . U 12 HOH B 4 604 543 HOH HOH . U 12 HOH B 5 605 6 HOH HOH . U 12 HOH B 6 606 84 HOH HOH . U 12 HOH B 7 607 592 HOH HOH . U 12 HOH B 8 608 58 HOH HOH . U 12 HOH B 9 609 146 HOH HOH . U 12 HOH B 10 610 617 HOH HOH . U 12 HOH B 11 611 21 HOH HOH . U 12 HOH B 12 612 127 HOH HOH . U 12 HOH B 13 613 415 HOH HOH . U 12 HOH B 14 614 317 HOH HOH . U 12 HOH B 15 615 247 HOH HOH . U 12 HOH B 16 616 227 HOH HOH . U 12 HOH B 17 617 167 HOH HOH . U 12 HOH B 18 618 180 HOH HOH . U 12 HOH B 19 619 86 HOH HOH . U 12 HOH B 20 620 44 HOH HOH . U 12 HOH B 21 621 141 HOH HOH . U 12 HOH B 22 622 291 HOH HOH . U 12 HOH B 23 623 192 HOH HOH . U 12 HOH B 24 624 193 HOH HOH . U 12 HOH B 25 625 47 HOH HOH . U 12 HOH B 26 626 570 HOH HOH . U 12 HOH B 27 627 508 HOH HOH . U 12 HOH B 28 628 382 HOH HOH . U 12 HOH B 29 629 115 HOH HOH . U 12 HOH B 30 630 373 HOH HOH . U 12 HOH B 31 631 152 HOH HOH . U 12 HOH B 32 632 122 HOH HOH . U 12 HOH B 33 633 237 HOH HOH . U 12 HOH B 34 634 569 HOH HOH . U 12 HOH B 35 635 564 HOH HOH . U 12 HOH B 36 636 581 HOH HOH . U 12 HOH B 37 637 201 HOH HOH . U 12 HOH B 38 638 22 HOH HOH . U 12 HOH B 39 639 67 HOH HOH . U 12 HOH B 40 640 211 HOH HOH . U 12 HOH B 41 641 48 HOH HOH . U 12 HOH B 42 642 516 HOH HOH . U 12 HOH B 43 643 10 HOH HOH . U 12 HOH B 44 644 214 HOH HOH . U 12 HOH B 45 645 612 HOH HOH . U 12 HOH B 46 646 504 HOH HOH . U 12 HOH B 47 647 616 HOH HOH . U 12 HOH B 48 648 414 HOH HOH . U 12 HOH B 49 649 217 HOH HOH . U 12 HOH B 50 650 610 HOH HOH . U 12 HOH B 51 651 563 HOH HOH . U 12 HOH B 52 652 69 HOH HOH . U 12 HOH B 53 653 188 HOH HOH . U 12 HOH B 54 654 618 HOH HOH . U 12 HOH B 55 655 357 HOH HOH . U 12 HOH B 56 656 574 HOH HOH . U 12 HOH B 57 657 620 HOH HOH . U 12 HOH B 58 658 546 HOH HOH . U 12 HOH B 59 659 286 HOH HOH . U 12 HOH B 60 660 598 HOH HOH . U 12 HOH B 61 661 619 HOH HOH . U 12 HOH B 62 662 77 HOH HOH . U 12 HOH B 63 663 541 HOH HOH . U 12 HOH B 64 664 520 HOH HOH . U 12 HOH B 65 665 509 HOH HOH . U 12 HOH B 66 666 582 HOH HOH . U 12 HOH B 67 667 550 HOH HOH . U 12 HOH B 68 668 476 HOH HOH . U 12 HOH B 69 669 517 HOH HOH . V 12 HOH C 1 601 499 HOH HOH . V 12 HOH C 2 602 68 HOH HOH . V 12 HOH C 3 603 1 HOH HOH . V 12 HOH C 4 604 573 HOH HOH . V 12 HOH C 5 605 8 HOH HOH . V 12 HOH C 6 606 572 HOH HOH . V 12 HOH C 7 607 74 HOH HOH . V 12 HOH C 8 608 52 HOH HOH . V 12 HOH C 9 609 12 HOH HOH . V 12 HOH C 10 610 81 HOH HOH . V 12 HOH C 11 611 2 HOH HOH . V 12 HOH C 12 612 400 HOH HOH . V 12 HOH C 13 613 239 HOH HOH . V 12 HOH C 14 614 71 HOH HOH . V 12 HOH C 15 615 39 HOH HOH . V 12 HOH C 16 616 615 HOH HOH . V 12 HOH C 17 617 5 HOH HOH . V 12 HOH C 18 618 583 HOH HOH . V 12 HOH C 19 619 36 HOH HOH . V 12 HOH C 20 620 337 HOH HOH . V 12 HOH C 21 621 111 HOH HOH . V 12 HOH C 22 622 246 HOH HOH . V 12 HOH C 23 623 16 HOH HOH . V 12 HOH C 24 624 24 HOH HOH . V 12 HOH C 25 625 107 HOH HOH . V 12 HOH C 26 626 187 HOH HOH . V 12 HOH C 27 627 75 HOH HOH . V 12 HOH C 28 628 108 HOH HOH . V 12 HOH C 29 629 258 HOH HOH . V 12 HOH C 30 630 321 HOH HOH . V 12 HOH C 31 631 566 HOH HOH . V 12 HOH C 32 632 101 HOH HOH . V 12 HOH C 33 633 78 HOH HOH . V 12 HOH C 34 634 50 HOH HOH . V 12 HOH C 35 635 56 HOH HOH . V 12 HOH C 36 636 4 HOH HOH . V 12 HOH C 37 637 191 HOH HOH . V 12 HOH C 38 638 441 HOH HOH . V 12 HOH C 39 639 64 HOH HOH . V 12 HOH C 40 640 92 HOH HOH . V 12 HOH C 41 641 42 HOH HOH . V 12 HOH C 42 642 15 HOH HOH . V 12 HOH C 43 643 93 HOH HOH . V 12 HOH C 44 644 132 HOH HOH . V 12 HOH C 45 645 332 HOH HOH . V 12 HOH C 46 646 182 HOH HOH . V 12 HOH C 47 647 62 HOH HOH . V 12 HOH C 48 648 189 HOH HOH . V 12 HOH C 49 649 38 HOH HOH . V 12 HOH C 50 650 139 HOH HOH . V 12 HOH C 51 651 29 HOH HOH . V 12 HOH C 52 652 35 HOH HOH . V 12 HOH C 53 653 232 HOH HOH . V 12 HOH C 54 654 314 HOH HOH . V 12 HOH C 55 655 54 HOH HOH . V 12 HOH C 56 656 128 HOH HOH . V 12 HOH C 57 657 281 HOH HOH . V 12 HOH C 58 658 174 HOH HOH . V 12 HOH C 59 659 45 HOH HOH . V 12 HOH C 60 660 3 HOH HOH . V 12 HOH C 61 661 330 HOH HOH . V 12 HOH C 62 662 97 HOH HOH . V 12 HOH C 63 663 479 HOH HOH . V 12 HOH C 64 664 99 HOH HOH . V 12 HOH C 65 665 14 HOH HOH . V 12 HOH C 66 666 309 HOH HOH . V 12 HOH C 67 667 102 HOH HOH . V 12 HOH C 68 668 150 HOH HOH . V 12 HOH C 69 669 323 HOH HOH . V 12 HOH C 70 670 123 HOH HOH . V 12 HOH C 71 671 500 HOH HOH . V 12 HOH C 72 672 162 HOH HOH . V 12 HOH C 73 673 539 HOH HOH . V 12 HOH C 74 674 536 HOH HOH . V 12 HOH C 75 675 153 HOH HOH . V 12 HOH C 76 676 100 HOH HOH . V 12 HOH C 77 677 603 HOH HOH . V 12 HOH C 78 678 32 HOH HOH . V 12 HOH C 79 679 292 HOH HOH . V 12 HOH C 80 680 225 HOH HOH . V 12 HOH C 81 681 26 HOH HOH . V 12 HOH C 82 682 60 HOH HOH . V 12 HOH C 83 683 274 HOH HOH . V 12 HOH C 84 684 264 HOH HOH . V 12 HOH C 85 685 53 HOH HOH . V 12 HOH C 86 686 622 HOH HOH . V 12 HOH C 87 687 287 HOH HOH . V 12 HOH C 88 688 195 HOH HOH . V 12 HOH C 89 689 605 HOH HOH . V 12 HOH C 90 690 279 HOH HOH . V 12 HOH C 91 691 143 HOH HOH . V 12 HOH C 92 692 61 HOH HOH . V 12 HOH C 93 693 339 HOH HOH . V 12 HOH C 94 694 283 HOH HOH . V 12 HOH C 95 695 125 HOH HOH . V 12 HOH C 96 696 402 HOH HOH . V 12 HOH C 97 697 607 HOH HOH . V 12 HOH C 98 698 129 HOH HOH . V 12 HOH C 99 699 95 HOH HOH . V 12 HOH C 100 700 194 HOH HOH . V 12 HOH C 101 701 545 HOH HOH . V 12 HOH C 102 702 624 HOH HOH . V 12 HOH C 103 703 148 HOH HOH . V 12 HOH C 104 704 548 HOH HOH . V 12 HOH C 105 705 614 HOH HOH . V 12 HOH C 106 706 117 HOH HOH . V 12 HOH C 107 707 145 HOH HOH . V 12 HOH C 108 708 591 HOH HOH . V 12 HOH C 109 709 376 HOH HOH . V 12 HOH C 110 710 568 HOH HOH . V 12 HOH C 111 711 559 HOH HOH . V 12 HOH C 112 712 448 HOH HOH . V 12 HOH C 113 713 85 HOH HOH . V 12 HOH C 114 714 308 HOH HOH . V 12 HOH C 115 715 553 HOH HOH . V 12 HOH C 116 716 604 HOH HOH . V 12 HOH C 117 717 243 HOH HOH . V 12 HOH C 118 718 606 HOH HOH . V 12 HOH C 119 719 154 HOH HOH . V 12 HOH C 120 720 437 HOH HOH . V 12 HOH C 121 721 626 HOH HOH . V 12 HOH C 122 722 202 HOH HOH . V 12 HOH C 123 723 529 HOH HOH . V 12 HOH C 124 724 466 HOH HOH . V 12 HOH C 125 725 521 HOH HOH . V 12 HOH C 126 726 205 HOH HOH . V 12 HOH C 127 727 590 HOH HOH . V 12 HOH C 128 728 276 HOH HOH . V 12 HOH C 129 729 412 HOH HOH . V 12 HOH C 130 730 518 HOH HOH . V 12 HOH C 131 731 361 HOH HOH . W 12 HOH D 1 601 210 HOH HOH . W 12 HOH D 2 602 103 HOH HOH . W 12 HOH D 3 603 206 HOH HOH . W 12 HOH D 4 604 601 HOH HOH . W 12 HOH D 5 605 106 HOH HOH . W 12 HOH D 6 606 623 HOH HOH . W 12 HOH D 7 607 310 HOH HOH . W 12 HOH D 8 608 155 HOH HOH . W 12 HOH D 9 609 602 HOH HOH . W 12 HOH D 10 610 158 HOH HOH . W 12 HOH D 11 611 600 HOH HOH . W 12 HOH D 12 612 149 HOH HOH . W 12 HOH D 13 613 147 HOH HOH . W 12 HOH D 14 614 27 HOH HOH . W 12 HOH D 15 615 419 HOH HOH . W 12 HOH D 16 616 218 HOH HOH . W 12 HOH D 17 617 531 HOH HOH . W 12 HOH D 18 618 481 HOH HOH . W 12 HOH D 19 619 391 HOH HOH . X 12 HOH E 1 201 114 HOH HOH . X 12 HOH E 2 202 625 HOH HOH . X 12 HOH E 3 203 203 HOH HOH . X 12 HOH E 4 204 184 HOH HOH . X 12 HOH E 5 205 378 HOH HOH . X 12 HOH E 6 206 471 HOH HOH . X 12 HOH E 7 207 554 HOH HOH . X 12 HOH E 8 208 399 HOH HOH . X 12 HOH E 9 209 528 HOH HOH . X 12 HOH E 10 210 240 HOH HOH . Y 12 HOH F 1 501 72 HOH HOH . Y 12 HOH F 2 502 170 HOH HOH . Y 12 HOH F 3 503 212 HOH HOH . Y 12 HOH F 4 504 51 HOH HOH . Y 12 HOH F 5 505 172 HOH HOH . Y 12 HOH F 6 506 136 HOH HOH . Y 12 HOH F 7 507 90 HOH HOH . Y 12 HOH F 8 508 484 HOH HOH . Y 12 HOH F 9 509 431 HOH HOH . Y 12 HOH F 10 510 169 HOH HOH . Y 12 HOH F 11 511 315 HOH HOH . Y 12 HOH F 12 512 181 HOH HOH . Y 12 HOH F 13 513 381 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . K 9 18.936 207.539 16.022 1 34.47 ? PB GDP 501 B 1 HETATM 2 O O1B GDP . . . K 9 18.562 208.585 15.021 1 30.24 ? O1B GDP 501 B 1 HETATM 3 O O2B GDP . . . K 9 19.425 208.154 17.345 1 33.66 ? O2B GDP 501 B 1 HETATM 4 O O3B GDP . . . K 9 19.951 206.52 15.512 1 39.62 ? O3B GDP 501 B 1 HETATM 5 O O3A GDP . . . K 9 17.598 206.689 16.352 1 36.41 ? O3A GDP 501 B 1 HETATM 6 P PA GDP . . . K 9 16.258 207.268 17.071 1 34.78 ? PA GDP 501 B 1 HETATM 7 O O1A GDP . . . K 9 15.184 207.134 16.024 1 39.72 ? O1A GDP 501 B 1 HETATM 8 O O2A GDP . . . K 9 16.482 208.576 17.766 1 36.5 ? O2A GDP 501 B 1 HETATM 9 O O5' GDP . . . K 9 16.215 206.191 18.221 1 36.08 ? O5' GDP 501 B 1 HETATM 10 C C5' GDP . . . K 9 15.193 205.19 18.371 1 35.58 ? C5' GDP 501 B 1 HETATM 11 C C4' GDP . . . K 9 14.558 205.366 19.762 1 35.96 ? C4' GDP 501 B 1 HETATM 12 O O4' GDP . . . K 9 13.984 206.678 19.948 1 35.81 ? O4' GDP 501 B 1 HETATM 13 C C3' GDP . . . K 9 13.409 204.4 19.964 1 37.49 ? C3' GDP 501 B 1 HETATM 14 O O3' GDP . . . K 9 13.375 204.111 21.361 1 35.94 ? O3' GDP 501 B 1 HETATM 15 C C2' GDP . . . K 9 12.171 205.186 19.581 1 38.11 ? C2' GDP 501 B 1 HETATM 16 O O2' GDP . . . K 9 11.054 204.712 20.318 1 44.96 ? O2' GDP 501 B 1 HETATM 17 C C1' GDP . . . K 9 12.561 206.547 20.068 1 38.1 ? C1' GDP 501 B 1 HETATM 18 N N9 GDP . . . K 9 12.093 207.683 19.298 1 38.37 ? N9 GDP 501 B 1 HETATM 19 C C8 GDP . . . K 9 12.354 207.997 18.014 1 39.01 ? C8 GDP 501 B 1 HETATM 20 N N7 GDP . . . K 9 11.821 209.201 17.691 1 36.25 ? N7 GDP 501 B 1 HETATM 21 C C5 GDP . . . K 9 11.213 209.653 18.816 1 39.03 ? C5 GDP 501 B 1 HETATM 22 C C6 GDP . . . K 9 10.437 210.843 19.21 1 40.58 ? C6 GDP 501 B 1 HETATM 23 O O6 GDP . . . K 9 10.228 211.73 18.362 1 36.43 ? O6 GDP 501 B 1 HETATM 24 N N1 GDP . . . K 9 10.015 210.94 20.483 1 39.01 ? N1 GDP 501 B 1 HETATM 25 C C2 GDP . . . K 9 10.235 209.998 21.409 1 40.83 ? C2 GDP 501 B 1 HETATM 26 N N2 GDP . . . K 9 9.734 210.156 22.674 1 36.34 ? N2 GDP 501 B 1 HETATM 27 N N3 GDP . . . K 9 10.935 208.862 21.115 1 37.95 ? N3 GDP 501 B 1 HETATM 28 C C4 GDP . . . K 9 11.417 208.661 19.872 1 36.84 ? C4 GDP 501 B 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #