data_5XRA # _model_server_result.job_id VbLlhVlcIoTjECAA3INuuA _model_server_result.datetime_utc '2024-11-30 09:18:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xra # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":608}' # _entry.id 5XRA # _exptl.entry_id 5XRA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.654 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XRA _cell.length_a 66.05 _cell.length_b 75.87 _cell.length_c 138.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XRA _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 159 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 257 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 166 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 264 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.035 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 137 n n C1 C10 CLR sing 138 n n C1 H11 CLR sing 139 n n C1 H12 CLR sing 140 n n C2 C3 CLR sing 141 n n C2 H21 CLR sing 142 n n C2 H22 CLR sing 143 n n C3 C4 CLR sing 144 n n C3 O1 CLR sing 145 n n C3 H3 CLR sing 146 n n C4 C5 CLR sing 147 n n C4 H41 CLR sing 148 n n C4 H42 CLR sing 149 n n C5 C6 CLR doub 150 n n C5 C10 CLR sing 151 n n C6 C7 CLR sing 152 n n C6 H6 CLR sing 153 n n C7 C8 CLR sing 154 n n C7 H71 CLR sing 155 n n C7 H72 CLR sing 156 n n C8 C9 CLR sing 157 n n C8 C14 CLR sing 158 n n C8 H8 CLR sing 159 n n C9 C10 CLR sing 160 n n C9 C11 CLR sing 161 n n C9 H9 CLR sing 162 n n C10 C19 CLR sing 163 n n C11 C12 CLR sing 164 n n C11 H111 CLR sing 165 n n C11 H112 CLR sing 166 n n C12 C13 CLR sing 167 n n C12 H121 CLR sing 168 n n C12 H122 CLR sing 169 n n C13 C14 CLR sing 170 n n C13 C17 CLR sing 171 n n C13 C18 CLR sing 172 n n C14 C15 CLR sing 173 n n C14 H14 CLR sing 174 n n C15 C16 CLR sing 175 n n C15 H151 CLR sing 176 n n C15 H152 CLR sing 177 n n C16 C17 CLR sing 178 n n C16 H161 CLR sing 179 n n C16 H162 CLR sing 180 n n C17 C20 CLR sing 181 n n C17 H17 CLR sing 182 n n C18 H181 CLR sing 183 n n C18 H182 CLR sing 184 n n C18 H183 CLR sing 185 n n C19 H191 CLR sing 186 n n C19 H192 CLR sing 187 n n C19 H193 CLR sing 188 n n C20 C21 CLR sing 189 n n C20 C22 CLR sing 190 n n C20 H20 CLR sing 191 n n C21 H211 CLR sing 192 n n C21 H212 CLR sing 193 n n C21 H213 CLR sing 194 n n C22 C23 CLR sing 195 n n C22 H221 CLR sing 196 n n C22 H222 CLR sing 197 n n C23 C24 CLR sing 198 n n C23 H231 CLR sing 199 n n C23 H232 CLR sing 200 n n C24 C25 CLR sing 201 n n C24 H241 CLR sing 202 n n C24 H242 CLR sing 203 n n C25 C26 CLR sing 204 n n C25 C27 CLR sing 205 n n C25 H25 CLR sing 206 n n C26 H261 CLR sing 207 n n C26 H262 CLR sing 208 n n C26 H263 CLR sing 209 n n C27 H271 CLR sing 210 n n C27 H272 CLR sing 211 n n C27 H273 CLR sing 212 n n O1 H1 CLR sing 213 n n # _atom_sites.entry_id 5XRA _atom_sites.fract_transf_matrix[1][1] 0.01514 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01318 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 601 1 FMN FMN . C 3 8D3 A 1 602 1 8D3 ALX . D 4 OLA A 1 603 1 OLA OLA . E 4 OLA A 1 604 2 OLA OLA . F 5 OLC A 1 605 1 OLC OLC . G 5 OLC A 1 606 2 OLC OLC . H 6 PEG A 1 607 1 PEG PEG . I 7 CLR A 1 608 1 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . I 7 -50.574 -143.627 310.905 1 63.31 ? C1 CLR 608 A 1 HETATM 2 C C2 CLR . . . I 7 -50.565 -142.216 310.32 1 62 ? C2 CLR 608 A 1 HETATM 3 C C3 CLR . . . I 7 -51.568 -142.177 309.173 1 60.29 ? C3 CLR 608 A 1 HETATM 4 C C4 CLR . . . I 7 -52.975 -142.305 309.763 1 60.1 ? C4 CLR 608 A 1 HETATM 5 C C5 CLR . . . I 7 -53.051 -143.618 310.53 1 61.86 ? C5 CLR 608 A 1 HETATM 6 C C6 CLR . . . I 7 -54.169 -144.284 310.514 1 62.78 ? C6 CLR 608 A 1 HETATM 7 C C7 CLR . . . I 7 -54.332 -145.663 311.099 1 64.11 ? C7 CLR 608 A 1 HETATM 8 C C8 CLR . . . I 7 -53.366 -145.908 312.27 1 64.48 ? C8 CLR 608 A 1 HETATM 9 C C9 CLR . . . I 7 -51.964 -145.402 311.91 1 65.26 ? C9 CLR 608 A 1 HETATM 10 C C10 CLR . . . I 7 -51.953 -143.944 311.492 1 63.65 ? C10 CLR 608 A 1 HETATM 11 C C11 CLR . . . I 7 -50.991 -145.618 313.063 1 64.08 ? C11 CLR 608 A 1 HETATM 12 C C12 CLR . . . I 7 -50.888 -147.111 313.382 1 63.61 ? C12 CLR 608 A 1 HETATM 13 C C13 CLR . . . I 7 -52.271 -147.68 313.717 1 61.71 ? C13 CLR 608 A 1 HETATM 14 C C14 CLR . . . I 7 -53.214 -147.408 312.504 1 62.69 ? C14 CLR 608 A 1 HETATM 15 C C15 CLR . . . I 7 -54.478 -148.174 312.916 1 61.27 ? C15 CLR 608 A 1 HETATM 16 C C16 CLR . . . I 7 -53.906 -149.467 313.564 1 59.53 ? C16 CLR 608 A 1 HETATM 17 C C17 CLR . . . I 7 -52.404 -149.201 313.849 1 61.32 ? C17 CLR 608 A 1 HETATM 18 C C18 CLR . . . I 7 -52.866 -146.976 314.943 1 58.77 ? C18 CLR 608 A 1 HETATM 19 C C19 CLR . . . I 7 -52.152 -143.087 312.745 1 63.46 ? C19 CLR 608 A 1 HETATM 20 C C20 CLR . . . I 7 -52.038 -149.795 315.223 1 62.46 ? C20 CLR 608 A 1 HETATM 21 C C21 CLR . . . I 7 -50.56 -149.618 315.593 1 59.32 ? C21 CLR 608 A 1 HETATM 22 C C22 CLR . . . I 7 -52.301 -151.302 315.17 1 68.59 ? C22 CLR 608 A 1 HETATM 23 C C23 CLR . . . I 7 -51.281 -151.952 314.23 1 71.64 ? C23 CLR 608 A 1 HETATM 24 C C24 CLR . . . I 7 -51.518 -153.461 314.141 1 72.54 ? C24 CLR 608 A 1 HETATM 25 C C25 CLR . . . I 7 -50.343 -154.121 313.416 1 72.94 ? C25 CLR 608 A 1 HETATM 26 C C26 CLR . . . I 7 -50.699 -155.57 313.081 1 73.28 ? C26 CLR 608 A 1 HETATM 27 C C27 CLR . . . I 7 -49.11 -154.108 314.323 1 71.62 ? C27 CLR 608 A 1 HETATM 28 O O1 CLR . . . I 7 -51.423 -140.941 308.467 1 60.43 ? O1 CLR 608 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 28 #