data_5XRZ # _model_server_result.job_id 1uShIPk3j2qiv55x27j74Q _model_server_result.datetime_utc '2025-04-26 11:46:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xrz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":301}' # _entry.id 5XRZ # _exptl.entry_id 5XRZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 91.89 _cell.angle_beta 108.68 _cell.angle_gamma 108.17 _cell.entry_id 5XRZ _cell.length_a 67.621 _cell.length_b 101.42 _cell.length_c 101.71 _cell.Z_PDB 11 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XRZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 143 A GLU 140 1_555 M K K . A K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.911 ? metalc ? metalc2 B OE2 GLU 143 B GLU 140 1_555 N K K . B K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? metalc ? metalc3 C OE2 GLU 143 C GLU 140 1_555 O K K . C K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc4 O K K . C K 301 1_555 L O3' DT 12 L DT 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.338 ? metalc ? metalc5 D OE2 GLU 143 D GLU 140 1_555 P K K . D K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? metalc ? metalc6 P K K . D K 301 1_555 L O4' DT 16 L DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.498 ? metalc ? metalc7 P K K . D K 301 1_555 L OP1 DT 17 L DT 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.451 ? metalc ? metalc8 E OE2 GLU 143 E GLU 140 1_555 Q K K . E K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.093 ? metalc ? metalc9 F OE2 GLU 143 F GLU 140 1_555 R K K . F K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.843 ? metalc ? metalc10 R K K . F K 301 1_555 L OP1 DT 25 L DT 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.3 ? metalc ? metalc11 G OE2 GLU 143 G GLU 140 1_555 S K K . G K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc12 H OE2 GLU 143 H GLU 140 1_555 T K K . H K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc13 T K K . H K 301 1_555 I OE2 GLU 148 I GLU 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.296 ? metalc ? metalc14 I OE2 GLU 143 I GLU 140 1_555 U K K . I K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.889 ? metalc ? metalc15 U K K . I K 301 1_555 L OP1 DT 37 L DT 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.866 ? metalc ? metalc16 K OE2 GLU 143 K GLU 140 1_555 V K K . K K 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.84 ? metalc ? metalc17 V K K . K K 301 1_555 L O5' DT 1 L DT 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.337 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5XRZ _atom_sites.fract_transf_matrix[1][1] 0.014788 _atom_sites.fract_transf_matrix[1][2] 0.004854 _atom_sites.fract_transf_matrix[1][3] 0.00578 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010377 _atom_sites.fract_transf_matrix[2][3] 0.001549 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010494 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 3 K A 1 301 2 K K . N 3 K B 1 301 3 K K . O 3 K C 1 301 4 K K . P 3 K D 1 301 5 K K . Q 3 K E 1 301 6 K K . R 3 K F 1 301 7 K K . S 3 K G 1 301 8 K K . T 3 K H 1 301 9 K K . U 3 K I 1 301 10 K K . V 3 K K 1 301 1 K K . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 3 _atom_site.Cartn_x 16.009 _atom_site.Cartn_y -30.112 _atom_site.Cartn_z -165.742 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 121.07 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 301 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 423 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #