data_5XS2
#
_model_server_result.job_id            Qi3A4JysZOAKpZUQUdFJNQ 
_model_server_result.datetime_utc      '2025-01-02 19:12:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5xs2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    5XS2 
#
_exptl.entry_id    5XS2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5XS2 
_cell.length_a            69.802 
_cell.length_b            76.173 
_cell.length_c            166.419 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5XS2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 153 n n 
C1 C2 GOL sing 154 n n 
C1 H11 GOL sing 155 n n 
C1 H12 GOL sing 156 n n 
O1 HO1 GOL sing 157 n n 
C2 O2 GOL sing 158 n n 
C2 C3 GOL sing 159 n n 
C2 H2 GOL sing 160 n n 
O2 HO2 GOL sing 161 n n 
C3 O3 GOL sing 162 n n 
C3 H31 GOL sing 163 n n 
C3 H32 GOL sing 164 n n 
O3 HO3 GOL sing 165 n n 
#
_atom_sites.entry_id                     5XS2 
_atom_sites.fract_transf_matrix[1][1]    0.014326 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013128 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006009 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 401 1 GOL GOL . 
D 4 8D6 A 1 402 1 8D6 LIG . 
E 5 HOH A 1 501 83 HOH HOH . 
E 5 HOH A 2 502 51 HOH HOH . 
E 5 HOH A 3 503 147 HOH HOH . 
E 5 HOH A 4 504 105 HOH HOH . 
E 5 HOH A 5 505 119 HOH HOH . 
E 5 HOH A 6 506 90 HOH HOH . 
E 5 HOH A 7 507 95 HOH HOH . 
E 5 HOH A 8 508 156 HOH HOH . 
E 5 HOH A 9 509 112 HOH HOH . 
E 5 HOH A 10 510 2 HOH HOH . 
E 5 HOH A 11 511 50 HOH HOH . 
E 5 HOH A 12 512 164 HOH HOH . 
E 5 HOH A 13 513 108 HOH HOH . 
E 5 HOH A 14 514 14 HOH HOH . 
E 5 HOH A 15 515 43 HOH HOH . 
E 5 HOH A 16 516 166 HOH HOH . 
E 5 HOH A 17 517 27 HOH HOH . 
E 5 HOH A 18 518 10 HOH HOH . 
E 5 HOH A 19 519 163 HOH HOH . 
E 5 HOH A 20 520 57 HOH HOH . 
E 5 HOH A 21 521 168 HOH HOH . 
E 5 HOH A 22 522 100 HOH HOH . 
E 5 HOH A 23 523 137 HOH HOH . 
E 5 HOH A 24 524 30 HOH HOH . 
E 5 HOH A 25 525 78 HOH HOH . 
E 5 HOH A 26 526 106 HOH HOH . 
E 5 HOH A 27 527 65 HOH HOH . 
E 5 HOH A 28 528 71 HOH HOH . 
E 5 HOH A 29 529 141 HOH HOH . 
E 5 HOH A 30 530 34 HOH HOH . 
E 5 HOH A 31 531 162 HOH HOH . 
E 5 HOH A 32 532 9 HOH HOH . 
E 5 HOH A 33 533 61 HOH HOH . 
E 5 HOH A 34 534 92 HOH HOH . 
E 5 HOH A 35 535 40 HOH HOH . 
E 5 HOH A 36 536 138 HOH HOH . 
E 5 HOH A 37 537 102 HOH HOH . 
E 5 HOH A 38 538 148 HOH HOH . 
E 5 HOH A 39 539 158 HOH HOH . 
E 5 HOH A 40 540 67 HOH HOH . 
E 5 HOH A 41 541 182 HOH HOH . 
E 5 HOH A 42 542 36 HOH HOH . 
E 5 HOH A 43 543 22 HOH HOH . 
E 5 HOH A 44 544 66 HOH HOH . 
E 5 HOH A 45 545 88 HOH HOH . 
E 5 HOH A 46 546 116 HOH HOH . 
E 5 HOH A 47 547 5 HOH HOH . 
E 5 HOH A 48 548 154 HOH HOH . 
E 5 HOH A 49 549 77 HOH HOH . 
E 5 HOH A 50 550 126 HOH HOH . 
E 5 HOH A 51 551 149 HOH HOH . 
E 5 HOH A 52 552 129 HOH HOH . 
E 5 HOH A 53 553 174 HOH HOH . 
E 5 HOH A 54 554 63 HOH HOH . 
E 5 HOH A 55 555 6 HOH HOH . 
E 5 HOH A 56 556 45 HOH HOH . 
E 5 HOH A 57 557 146 HOH HOH . 
E 5 HOH A 58 558 49 HOH HOH . 
E 5 HOH A 59 559 46 HOH HOH . 
E 5 HOH A 60 560 145 HOH HOH . 
E 5 HOH A 61 561 107 HOH HOH . 
E 5 HOH A 62 562 159 HOH HOH . 
E 5 HOH A 63 563 110 HOH HOH . 
E 5 HOH A 64 564 8 HOH HOH . 
E 5 HOH A 65 565 103 HOH HOH . 
E 5 HOH A 66 566 139 HOH HOH . 
E 5 HOH A 67 567 72 HOH HOH . 
E 5 HOH A 68 568 37 HOH HOH . 
E 5 HOH A 69 569 184 HOH HOH . 
E 5 HOH A 70 570 39 HOH HOH . 
E 5 HOH A 71 571 59 HOH HOH . 
E 5 HOH A 72 572 20 HOH HOH . 
E 5 HOH A 73 573 165 HOH HOH . 
E 5 HOH A 74 574 21 HOH HOH . 
E 5 HOH A 75 575 86 HOH HOH . 
E 5 HOH A 76 576 70 HOH HOH . 
E 5 HOH A 77 577 180 HOH HOH . 
E 5 HOH A 78 578 81 HOH HOH . 
E 5 HOH A 79 579 42 HOH HOH . 
E 5 HOH A 80 580 114 HOH HOH . 
E 5 HOH A 81 581 15 HOH HOH . 
E 5 HOH A 82 582 12 HOH HOH . 
E 5 HOH A 83 583 79 HOH HOH . 
E 5 HOH A 84 584 52 HOH HOH . 
E 5 HOH A 85 585 122 HOH HOH . 
E 5 HOH A 86 586 151 HOH HOH . 
E 5 HOH A 87 587 117 HOH HOH . 
E 5 HOH A 88 588 58 HOH HOH . 
E 5 HOH A 89 589 177 HOH HOH . 
E 5 HOH A 90 590 97 HOH HOH . 
E 5 HOH A 91 591 109 HOH HOH . 
E 5 HOH A 92 592 31 HOH HOH . 
E 5 HOH A 93 593 56 HOH HOH . 
E 5 HOH A 94 594 80 HOH HOH . 
E 5 HOH A 95 595 134 HOH HOH . 
E 5 HOH A 96 596 123 HOH HOH . 
E 5 HOH A 97 597 11 HOH HOH . 
E 5 HOH A 98 598 18 HOH HOH . 
E 5 HOH A 99 599 74 HOH HOH . 
E 5 HOH A 100 600 7 HOH HOH . 
E 5 HOH A 101 601 29 HOH HOH . 
E 5 HOH A 102 602 19 HOH HOH . 
E 5 HOH A 103 603 91 HOH HOH . 
E 5 HOH A 104 604 25 HOH HOH . 
E 5 HOH A 105 605 85 HOH HOH . 
E 5 HOH A 106 606 115 HOH HOH . 
E 5 HOH A 107 607 161 HOH HOH . 
E 5 HOH A 108 608 94 HOH HOH . 
E 5 HOH A 109 609 87 HOH HOH . 
E 5 HOH A 110 610 3 HOH HOH . 
E 5 HOH A 111 611 38 HOH HOH . 
E 5 HOH A 112 612 28 HOH HOH . 
E 5 HOH A 113 613 188 HOH HOH . 
E 5 HOH A 114 614 130 HOH HOH . 
E 5 HOH A 115 615 64 HOH HOH . 
E 5 HOH A 116 616 62 HOH HOH . 
E 5 HOH A 117 617 96 HOH HOH . 
E 5 HOH A 118 618 26 HOH HOH . 
E 5 HOH A 119 619 124 HOH HOH . 
E 5 HOH A 120 620 33 HOH HOH . 
E 5 HOH A 121 621 4 HOH HOH . 
E 5 HOH A 122 622 170 HOH HOH . 
E 5 HOH A 123 623 111 HOH HOH . 
E 5 HOH A 124 624 13 HOH HOH . 
E 5 HOH A 125 625 121 HOH HOH . 
E 5 HOH A 126 626 113 HOH HOH . 
E 5 HOH A 127 627 153 HOH HOH . 
F 5 HOH B 1 301 132 HOH HOH . 
F 5 HOH B 2 302 175 HOH HOH . 
F 5 HOH B 3 303 190 HOH HOH . 
F 5 HOH B 4 304 17 HOH HOH . 
F 5 HOH B 5 305 104 HOH HOH . 
F 5 HOH B 6 306 127 HOH HOH . 
F 5 HOH B 7 307 171 HOH HOH . 
F 5 HOH B 8 308 89 HOH HOH . 
F 5 HOH B 9 309 183 HOH HOH . 
F 5 HOH B 10 310 35 HOH HOH . 
F 5 HOH B 11 311 32 HOH HOH . 
F 5 HOH B 12 312 98 HOH HOH . 
F 5 HOH B 13 313 101 HOH HOH . 
F 5 HOH B 14 314 48 HOH HOH . 
F 5 HOH B 15 315 160 HOH HOH . 
F 5 HOH B 16 316 44 HOH HOH . 
F 5 HOH B 17 317 76 HOH HOH . 
F 5 HOH B 18 318 47 HOH HOH . 
F 5 HOH B 19 319 24 HOH HOH . 
F 5 HOH B 20 320 93 HOH HOH . 
F 5 HOH B 21 321 75 HOH HOH . 
F 5 HOH B 22 322 152 HOH HOH . 
F 5 HOH B 23 323 68 HOH HOH . 
F 5 HOH B 24 324 82 HOH HOH . 
F 5 HOH B 25 325 41 HOH HOH . 
F 5 HOH B 26 326 53 HOH HOH . 
F 5 HOH B 27 327 186 HOH HOH . 
F 5 HOH B 28 328 155 HOH HOH . 
F 5 HOH B 29 329 16 HOH HOH . 
F 5 HOH B 30 330 118 HOH HOH . 
F 5 HOH B 31 331 136 HOH HOH . 
F 5 HOH B 32 332 178 HOH HOH . 
F 5 HOH B 33 333 169 HOH HOH . 
F 5 HOH B 34 334 23 HOH HOH . 
F 5 HOH B 35 335 55 HOH HOH . 
F 5 HOH B 36 336 128 HOH HOH . 
F 5 HOH B 37 337 131 HOH HOH . 
F 5 HOH B 38 338 84 HOH HOH . 
F 5 HOH B 39 339 142 HOH HOH . 
F 5 HOH B 40 340 99 HOH HOH . 
F 5 HOH B 41 341 73 HOH HOH . 
F 5 HOH B 42 342 133 HOH HOH . 
F 5 HOH B 43 343 69 HOH HOH . 
F 5 HOH B 44 344 120 HOH HOH . 
F 5 HOH B 45 345 189 HOH HOH . 
F 5 HOH B 46 346 54 HOH HOH . 
F 5 HOH B 47 347 187 HOH HOH . 
F 5 HOH B 48 348 185 HOH HOH . 
F 5 HOH B 49 349 157 HOH HOH . 
F 5 HOH B 50 350 179 HOH HOH . 
F 5 HOH B 51 351 150 HOH HOH . 
F 5 HOH B 52 352 172 HOH HOH . 
F 5 HOH B 53 353 1 HOH HOH . 
F 5 HOH B 54 354 125 HOH HOH . 
F 5 HOH B 55 355 144 HOH HOH . 
F 5 HOH B 56 356 173 HOH HOH . 
F 5 HOH B 57 357 176 HOH HOH . 
F 5 HOH B 58 358 135 HOH HOH . 
F 5 HOH B 59 359 60 HOH HOH . 
F 5 HOH B 60 360 143 HOH HOH . 
F 5 HOH B 61 361 140 HOH HOH . 
F 5 HOH B 62 362 181 HOH HOH . 
F 5 HOH B 63 363 167 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 18.347 25.056 -23.271 1 28.11 ? C1 GOL 401 A 1 
HETATM 2 O O1 GOL . . . C 3 17.929 26.132 -24.113 1 25.85 ? O1 GOL 401 A 1 
HETATM 3 C C2 GOL . . . C 3 19.313 24.194 -24.088 1 28.46 ? C2 GOL 401 A 1 
HETATM 4 O O2 GOL . . . C 3 20.434 25.013 -24.497 1 31.04 ? O2 GOL 401 A 1 
HETATM 5 C C3 GOL . . . C 3 19.794 22.99 -23.301 1 25.94 ? C3 GOL 401 A 1 
HETATM 6 O O3 GOL . . . C 3 20.16 23.438 -21.985 1 22.41 ? O3 GOL 401 A 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#