data_5XTB
#
_model_server_result.job_id            Pk8AnYOeDY9fef3iTELqBA 
_model_server_result.datetime_utc      '2024-11-26 22:21:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5xtb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Y","auth_seq_id":401}' 
#
_entry.id    5XTB 
#
_exptl.entry_id    5XTB 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          22 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5XTB 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5XTB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octadecameric 
_pdbx_struct_assembly.oligomeric_count      18 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      22 
_struct_asym.id                             Y 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 GLN 355 A GLN 381 1_555 S FE1 SF4 . A SF4 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? 
metalc ? metalc2 B N CYS 80 B CYS 114 1_555 U FE2 SF4 . B SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? 
metalc ? metalc3 B N GLY 120 B GLY 154 1_555 V FE4 SF4 . B SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.794 ? 
metalc ? metalc4 C SG CYS 32 C CYS 89 1_555 W FE2 SF4 . C SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? 
metalc ? metalc5 L NE2 HIS 95 M HIS 124 1_555 Z FE3 SF4 . M SF4 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? 
metalc ? metalc6 L SG CYS 108 M CYS 137 1_555 Z FE4 SF4 . M SF4 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? 
metalc ? metalc7 L SG CYS 147 M CYS 176 1_555 AA FE1 SF4 . M SF4 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
covale ? covale1 L SG CYS 147 M CYS 176 1_555 AA S3 SF4 . M SF4 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc8 L O CYS 150 M CYS 179 1_555 AA FE1 SF4 . M SF4 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? 
metalc ? metalc9 N SG CYS 141 O CYS 176 1_555 CA FE2 FES . O FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? 
metalc ? metalc10 N SG CYS 145 O CYS 180 1_555 CA FE2 FES . O FES 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5XTB 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
S 19 SF4 A 1 501 501 SF4 SF4 . 
T 20 FMN A 1 502 502 FMN FMN . 
U 19 SF4 B 1 301 301 SF4 SF4 . 
V 19 SF4 B 1 302 302 SF4 SF4 . 
W 19 SF4 C 1 301 301 SF4 SF4 . 
X 21 8Q1 E 1 201 201 8Q1 8Q1 . 
Y 22 NDP J 1 401 401 NDP NDP . 
Z 19 SF4 M 1 801 801 SF4 SF4 . 
AA 19 SF4 M 1 802 802 SF4 SF4 . 
BA 23 FES M 1 803 803 FES FES . 
CA 23 FES O 1 301 301 FES FES . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . Y 22 195.52 201.427 279.668 1 84.44 ? PA NDP 401 J 1 
HETATM 2 O O1A NDP . . . Y 22 194.858 201.174 278.35 1 84.44 ? O1A NDP 401 J 1 
HETATM 3 O O2A NDP . . . Y 22 196.937 200.998 279.878 1 84.44 ? O2A NDP 401 J 1 
HETATM 4 O O5B NDP . . . Y 22 194.596 200.815 280.821 1 84.44 ? O5B NDP 401 J 1 
HETATM 5 C C5B NDP . . . Y 22 193.257 200.452 280.537 1 84.44 ? C5B NDP 401 J 1 
HETATM 6 C C4B NDP . . . Y 22 193.056 198.991 280.871 1 84.44 ? C4B NDP 401 J 1 
HETATM 7 O O4B NDP . . . Y 22 191.678 198.793 281.14 1 84.44 ? O4B NDP 401 J 1 
HETATM 8 C C3B NDP . . . Y 22 193.385 198.104 279.689 1 84.44 ? C3B NDP 401 J 1 
HETATM 9 O O3B NDP . . . Y 22 193.968 196.902 280.189 1 84.44 ? O3B NDP 401 J 1 
HETATM 10 C C2B NDP . . . Y 22 192.04 197.786 279.08 1 84.44 ? C2B NDP 401 J 1 
HETATM 11 O O2B NDP . . . Y 22 192.034 196.556 278.345 1 84.44 ? O2B NDP 401 J 1 
HETATM 12 C C1B NDP . . . Y 22 191.153 197.773 280.302 1 84.44 ? C1B NDP 401 J 1 
HETATM 13 N N9A NDP . . . Y 22 189.736 198.046 279.997 1 84.44 ? N9A NDP 401 J 1 
HETATM 14 C C8A NDP . . . Y 22 189.082 199.177 280.275 1 84.44 ? C8A NDP 401 J 1 
HETATM 15 N N7A NDP . . . Y 22 187.79 199.095 279.887 1 84.44 ? N7A NDP 401 J 1 
HETATM 16 C C5A NDP . . . Y 22 187.606 197.886 279.358 1 84.44 ? C5A NDP 401 J 1 
HETATM 17 C C6A NDP . . . Y 22 186.483 197.154 278.762 1 84.44 ? C6A NDP 401 J 1 
HETATM 18 N N6A NDP . . . Y 22 185.273 197.737 278.66 1 84.44 ? N6A NDP 401 J 1 
HETATM 19 N N1A NDP . . . Y 22 186.7 195.898 278.323 1 84.44 ? N1A NDP 401 J 1 
HETATM 20 C C2A NDP . . . Y 22 187.904 195.312 278.419 1 84.44 ? C2A NDP 401 J 1 
HETATM 21 N N3A NDP . . . Y 22 188.97 195.926 278.956 1 84.44 ? N3A NDP 401 J 1 
HETATM 22 C C4A NDP . . . Y 22 188.887 197.192 279.434 1 84.44 ? C4A NDP 401 J 1 
HETATM 23 O O3 NDP . . . Y 22 195.486 202.98 280.006 1 84.44 ? O3 NDP 401 J 1 
HETATM 24 P PN NDP . . . Y 22 196.437 203.428 281.202 1 84.44 ? PN NDP 401 J 1 
HETATM 25 O O1N NDP . . . Y 22 196.302 202.382 282.263 1 84.44 ? O1N NDP 401 J 1 
HETATM 26 O O2N NDP . . . Y 22 197.777 203.753 280.617 1 84.44 ? O2N NDP 401 J 1 
HETATM 27 O O5D NDP . . . Y 22 195.8 204.775 281.783 1 84.44 ? O5D NDP 401 J 1 
HETATM 28 C C5D NDP . . . Y 22 195.015 204.741 282.973 1 84.44 ? C5D NDP 401 J 1 
HETATM 29 C C4D NDP . . . Y 22 193.808 205.665 282.847 1 84.44 ? C4D NDP 401 J 1 
HETATM 30 O O4D NDP . . . Y 22 194.176 206.988 283.224 1 84.44 ? O4D NDP 401 J 1 
HETATM 31 C C3D NDP . . . Y 22 193.303 205.723 281.418 1 84.44 ? C3D NDP 401 J 1 
HETATM 32 O O3D NDP . . . Y 22 191.903 205.422 281.406 1 84.44 ? O3D NDP 401 J 1 
HETATM 33 C C2D NDP . . . Y 22 193.638 207.123 280.929 1 84.44 ? C2D NDP 401 J 1 
HETATM 34 O O2D NDP . . . Y 22 192.562 207.75 280.227 1 84.44 ? O2D NDP 401 J 1 
HETATM 35 C C1D NDP . . . Y 22 193.96 207.923 282.172 1 84.44 ? C1D NDP 401 J 1 
HETATM 36 N N1N NDP . . . Y 22 195.16 208.729 281.961 1 84.44 ? N1N NDP 401 J 1 
HETATM 37 C C2N NDP . . . Y 22 196.226 208.209 281.358 1 84.44 ? C2N NDP 401 J 1 
HETATM 38 C C3N NDP . . . Y 22 197.377 208.95 281.144 1 84.44 ? C3N NDP 401 J 1 
HETATM 39 C C7N NDP . . . Y 22 198.556 208.327 280.47 1 84.44 ? C7N NDP 401 J 1 
HETATM 40 O O7N NDP . . . Y 22 198.458 207.214 279.993 1 84.44 ? O7N NDP 401 J 1 
HETATM 41 N N7N NDP . . . Y 22 199.695 209.006 280.412 1 84.44 ? N7N NDP 401 J 1 
HETATM 42 C C4N NDP . . . Y 22 197.48 210.381 281.584 1 84.44 ? C4N NDP 401 J 1 
HETATM 43 C C5N NDP . . . Y 22 196.256 210.819 282.224 1 84.44 ? C5N NDP 401 J 1 
HETATM 44 C C6N NDP . . . Y 22 195.162 209.987 282.385 1 84.44 ? C6N NDP 401 J 1 
HETATM 45 P P2B NDP . . . Y 22 192.21 195.096 278.995 1 84.44 ? P2B NDP 401 J 1 
HETATM 46 O O1X NDP . . . Y 22 193.492 194.595 278.396 1 84.44 ? O1X NDP 401 J 1 
HETATM 47 O O2X NDP . . . Y 22 192.275 195.321 280.48 1 84.44 ? O2X NDP 401 J 1 
HETATM 48 O O3X NDP . . . Y 22 190.979 194.371 278.524 1 84.44 ? O3X NDP 401 J 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    46 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          27 
_model_server_stats.element_count           48 
#