data_5XTC # _model_server_result.job_id X600lrJaWcvL6opySu50LQ _model_server_result.datetime_utc '2025-02-17 05:49:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xtc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"NA","auth_seq_id":701}' # _entry.id 5XTC # _exptl.entry_id 5XTC _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 749.073 _entity.id 32 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XTC _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XTC _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 29-meric _pdbx_struct_assembly.oligomeric_count 29 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 32 FA N N ? 32 HA N N ? 32 NA N N ? 32 OA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 94 V CYS 95 1_555 D SG CYS 114 V CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 K SG CYS 111 c CYS 144 1_555 T SG CYS 279 l CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf3 L SG CYS 149 d CYS 149 1_555 M SG CYS 88 e CYS 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 P SG CYS 32 h CYS 33 1_555 P SG CYS 65 h CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf5 P SG CYS 42 h CYS 43 1_555 P SG CYS 55 h CYS 56 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf6 AA SG CYS 75 u CYS 78 1_555 AA SG CYS 107 u CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf7 BA SG CYS 67 v CYS 69 1_555 BA SG CYS 78 v CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? # _chem_comp.formula 'C41 H83 N O8 P 1' _chem_comp.formula_weight 749.073 _chem_comp.id PEE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DOPE # _atom_sites.entry_id 5XTC _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code DA 30 PLX U 1 101 101 PLX PLX . EA 31 CDL V 1 201 201 CDL CDL . FA 32 PEE V 1 202 202 PEE PEE . GA 30 PLX V 1 203 203 PLX PLX . HA 32 PEE W 1 201 201 PEE PEE . IA 30 PLX b 1 201 201 PLX PLX . JA 30 PLX g 1 201 201 PLX PLX . KA 30 PLX g 1 202 202 PLX PLX . LA 30 PLX g 1 203 203 PLX PLX . MA 31 CDL i 1 401 401 CDL CDL . NA 32 PEE l 1 701 701 PEE PEE . OA 32 PEE l 1 702 702 PEE PEE . PA 31 CDL l 1 703 703 CDL CDL . QA 31 CDL l 1 704 704 CDL CDL . RA 31 CDL n 1 101 101 CDL CDL . SA 33 8Q1 p 1 201 201 8Q1 8Q1 . TA 30 PLX r 1 501 501 PLX PLX . UA 30 PLX r 1 502 502 PLX PLX . VA 30 PLX s 1 401 401 PLX PLX . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 PEE . . . NA 32 274.176 228.857 255.559 1 20 ? C2 PEE 701 l 1 HETATM 2 C C1 PEE . . . NA 32 273.435 229.508 256.73 1 20 ? C1 PEE 701 l 1 HETATM 3 N N PEE . . . NA 32 276.835 227.821 261.794 1 20 ? N PEE 701 l 1 HETATM 4 C C3 PEE . . . NA 32 273.268 228.637 254.319 1 20 ? C3 PEE 701 l 1 HETATM 5 C C4 PEE . . . NA 32 274.779 228.062 260.502 1 20 ? C4 PEE 701 l 1 HETATM 6 C C5 PEE . . . NA 32 275.571 227.209 261.499 1 20 ? C5 PEE 701 l 1 HETATM 7 C C10 PEE . . . NA 32 275.824 229.396 253.899 1 20 ? C10 PEE 701 l 1 HETATM 8 C C11 PEE . . . NA 32 275.608 230.329 252.69 1 20 ? C11 PEE 701 l 1 HETATM 9 C C12 PEE . . . NA 32 276.9 230.528 251.85 1 20 ? C12 PEE 701 l 1 HETATM 10 C C13 PEE . . . NA 32 277.162 229.346 250.904 1 20 ? C13 PEE 701 l 1 HETATM 11 C C14 PEE . . . NA 32 276.283 229.417 249.62 1 20 ? C14 PEE 701 l 1 HETATM 12 C C15 PEE . . . NA 32 276.671 230.619 248.727 1 20 ? C15 PEE 701 l 1 HETATM 13 C C16 PEE . . . NA 32 276.866 230.202 247.251 1 20 ? C16 PEE 701 l 1 HETATM 14 C C17 PEE . . . NA 32 277.235 231.405 246.36 1 20 ? C17 PEE 701 l 1 HETATM 15 C C18 PEE . . . NA 32 276.029 231.882 245.529 1 20 ? C18 PEE 701 l 1 HETATM 16 C C19 PEE . . . NA 32 275.247 230.689 244.918 1 20 ? C19 PEE 701 l 1 HETATM 17 C C20 PEE . . . NA 32 274.912 230.936 243.425 1 20 ? C20 PEE 701 l 1 HETATM 18 C C21 PEE . . . NA 32 275.605 232.199 242.882 1 20 ? C21 PEE 701 l 1 HETATM 19 C C22 PEE . . . NA 32 275.639 232.246 241.341 1 20 ? C22 PEE 701 l 1 HETATM 20 C C23 PEE . . . NA 32 277.054 232.495 240.794 1 20 ? C23 PEE 701 l 1 HETATM 21 C C24 PEE . . . NA 32 277.218 233.91 240.193 1 20 ? C24 PEE 701 l 1 HETATM 22 C C25 PEE . . . NA 32 277.386 233.884 238.653 1 20 ? C25 PEE 701 l 1 HETATM 23 C C26 PEE . . . NA 32 276.055 234.072 237.918 1 20 ? C26 PEE 701 l 1 HETATM 24 C C27 PEE . . . NA 32 275.926 233.165 236.698 1 20 ? C27 PEE 701 l 1 HETATM 25 C C30 PEE . . . NA 32 272.958 226.95 252.583 1 20 ? C30 PEE 701 l 1 HETATM 26 C C31 PEE . . . NA 32 273.487 225.799 251.693 1 20 ? C31 PEE 701 l 1 HETATM 27 C C32 PEE . . . NA 32 272.849 225.84 250.282 1 20 ? C32 PEE 701 l 1 HETATM 28 C C33 PEE . . . NA 32 272.643 227.299 249.777 1 20 ? C33 PEE 701 l 1 HETATM 29 C C34 PEE . . . NA 32 272.829 227.414 248.264 1 20 ? C34 PEE 701 l 1 HETATM 30 C C35 PEE . . . NA 32 273.399 226.13 247.657 1 20 ? C35 PEE 701 l 1 HETATM 31 C C36 PEE . . . NA 32 273.032 225.997 246.157 1 20 ? C36 PEE 701 l 1 HETATM 32 C C37 PEE . . . NA 32 272.937 227.397 245.465 1 20 ? C37 PEE 701 l 1 HETATM 33 C C38 PEE . . . NA 32 273.026 227.283 243.911 1 20 ? C38 PEE 701 l 1 HETATM 34 C C39 PEE . . . NA 32 271.619 227.175 243.258 1 20 ? C39 PEE 701 l 1 HETATM 35 C C40 PEE . . . NA 32 271.291 228.426 242.399 1 20 ? C40 PEE 701 l 1 HETATM 36 C C41 PEE . . . NA 32 269.831 228.429 241.942 1 20 ? C41 PEE 701 l 1 HETATM 37 C C42 PEE . . . NA 32 269.236 227.014 241.909 1 20 ? C42 PEE 701 l 1 HETATM 38 C C43 PEE . . . NA 32 268.423 226.782 240.651 1 20 ? C43 PEE 701 l 1 HETATM 39 C C44 PEE . . . NA 32 267.061 226.191 240.951 1 20 ? C44 PEE 701 l 1 HETATM 40 C C45 PEE . . . NA 32 265.949 227.192 240.771 1 20 ? C45 PEE 701 l 1 HETATM 41 O O4 PEE . . . NA 32 276.48 228.377 253.775 1 20 ? O4 PEE 701 l 1 HETATM 42 O O5 PEE . . . NA 32 271.797 227.317 252.482 1 20 ? O5 PEE 701 l 1 HETATM 43 O O2 PEE . . . NA 32 275.251 229.722 255.17 1 20 ? O2 PEE 701 l 1 HETATM 44 O O3 PEE . . . NA 32 273.856 227.579 253.531 1 20 ? O3 PEE 701 l 1 HETATM 45 O O1P PEE . . . NA 32 271.767 227.642 258.407 1 20 ? O1P PEE 701 l 1 HETATM 46 O O2P PEE . . . NA 32 273.716 226.418 257.535 1 20 ? O2P PEE 701 l 1 HETATM 47 O O3P PEE . . . NA 32 273.906 228.927 257.943 1 20 ? O3P PEE 701 l 1 HETATM 48 O O4P PEE . . . NA 32 273.752 227.249 259.934 1 20 ? O4P PEE 701 l 1 HETATM 49 P P PEE . . . NA 32 273.27 227.545 258.439 1 20 ? P PEE 701 l 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 56 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 49 #