data_5XUQ
#
_model_server_result.job_id            lMwrV_q_6AlyFK9HLR7b5Q 
_model_server_result.datetime_utc      '2024-11-04 23:54:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5xuq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    5XUQ 
#
_exptl.entry_id    5XUQ 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              507.747 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4~{S})-4-[(1~{R})-1-[(1~{R},3~{a}~{S},4~{E},7~{a}~{R})-7~{a}-methyl-4-[2-[(3~{R},5~{R})-4-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-1-yl]ethyl]-1-(1~{H}-pyrrol-2-yl)octan-1-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.97 
_cell.angle_gamma         90 
_cell.entry_id            5XUQ 
_cell.length_a            151.8 
_cell.length_b            41.49 
_cell.length_c            42.02 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5XUQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C33 H49 N O3' 
_chem_comp.formula_weight    507.747 
_chem_comp.id                8FF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4~{S})-4-[(1~{R})-1-[(1~{R},3~{a}~{S},4~{E},7~{a}~{R})-7~{a}-methyl-4-[2-[(3~{R},5~{R})-4-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-1-yl]ethyl]-1-(1~{H}-pyrrol-2-yl)octan-1-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C19 C2 8FF doub 1 n n 
O2 C1 8FF sing 2 n n 
C2 C1 8FF sing 3 n n 
C2 C3 8FF sing 4 n n 
C1 C10 8FF sing 5 n n 
C3 O1 8FF sing 6 n n 
C3 C4 8FF sing 7 n n 
C10 C5 8FF sing 8 n n 
C4 C5 8FF sing 9 n n 
C5 C6 8FF doub 10 n n 
C6 C7 8FF sing 11 n n 
C7 C8 8FF doub 12 e n 
C8 C14 8FF sing 13 n n 
C8 C9 8FF sing 14 n n 
C15 C14 8FF sing 15 n n 
C15 C16 8FF sing 16 n n 
C18 C13 8FF sing 17 n n 
C14 C13 8FF sing 18 n n 
C9 C11 8FF sing 19 n n 
C16 C17 8FF sing 20 n n 
C13 C17 8FF sing 21 n n 
C13 C12 8FF sing 22 n n 
C11 C12 8FF sing 23 n n 
C17 C20 8FF sing 24 n n 
C24 C25 8FF sing 25 n n 
C24 C23 8FF sing 26 n n 
C25 O3 8FF doub 27 n n 
C25 C26 8FF sing 28 n n 
C20 C22 8FF sing 29 n n 
C20 C21 8FF sing 30 n n 
C27 C26 8FF doub 31 n y 
C27 C28 8FF sing 32 n y 
C26 N1 8FF sing 33 n y 
C28 C29 8FF doub 34 n y 
C22 C23 8FF sing 35 n n 
C22 C30 8FF sing 36 n n 
N1 C29 8FF sing 37 n y 
C32 C33 8FF sing 38 n n 
C32 C31 8FF sing 39 n n 
C31 C30 8FF sing 40 n n 
N1 H1 8FF sing 41 n n 
C29 H2 8FF sing 42 n n 
C28 H3 8FF sing 43 n n 
C27 H4 8FF sing 44 n n 
C24 H5 8FF sing 45 n n 
C24 H6 8FF sing 46 n n 
C23 H7 8FF sing 47 n n 
C23 H8 8FF sing 48 n n 
C22 H9 8FF sing 49 n n 
C30 H10 8FF sing 50 n n 
C30 H11 8FF sing 51 n n 
C31 H12 8FF sing 52 n n 
C31 H13 8FF sing 53 n n 
C32 H14 8FF sing 54 n n 
C32 H15 8FF sing 55 n n 
C33 H16 8FF sing 56 n n 
C33 H17 8FF sing 57 n n 
C33 H18 8FF sing 58 n n 
C20 H19 8FF sing 59 n n 
C21 H20 8FF sing 60 n n 
C21 H21 8FF sing 61 n n 
C21 H22 8FF sing 62 n n 
C17 H23 8FF sing 63 n n 
C18 H24 8FF sing 64 n n 
C18 H25 8FF sing 65 n n 
C18 H26 8FF sing 66 n n 
C12 H27 8FF sing 67 n n 
C12 H28 8FF sing 68 n n 
C11 H29 8FF sing 69 n n 
C11 H30 8FF sing 70 n n 
C9 H31 8FF sing 71 n n 
C9 H32 8FF sing 72 n n 
C16 H33 8FF sing 73 n n 
C16 H34 8FF sing 74 n n 
C15 H35 8FF sing 75 n n 
C15 H36 8FF sing 76 n n 
C14 H37 8FF sing 77 n n 
C7 H38 8FF sing 78 n n 
C6 H39 8FF sing 79 n n 
C10 H40 8FF sing 80 n n 
C10 H41 8FF sing 81 n n 
C4 H42 8FF sing 82 n n 
C4 H43 8FF sing 83 n n 
C3 H44 8FF sing 84 n n 
O1 H45 8FF sing 85 n n 
C19 H46 8FF sing 86 n n 
C19 H47 8FF sing 87 n n 
C1 H48 8FF sing 88 n n 
O2 H49 8FF sing 89 n n 
#
_atom_sites.entry_id                     5XUQ 
_atom_sites.fract_transf_matrix[1][1]    0.006588 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000805 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024102 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023975 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 8FF A 1 501 1 8FF mt1 . 
D 4 HOH A 1 601 4 HOH HOH . 
D 4 HOH A 2 602 1 HOH HOH . 
D 4 HOH A 3 603 28 HOH HOH . 
D 4 HOH A 4 604 5 HOH HOH . 
D 4 HOH A 5 605 17 HOH HOH . 
D 4 HOH A 6 606 7 HOH HOH . 
D 4 HOH A 7 607 3 HOH HOH . 
D 4 HOH A 8 608 13 HOH HOH . 
D 4 HOH A 9 609 15 HOH HOH . 
D 4 HOH A 10 610 21 HOH HOH . 
D 4 HOH A 11 611 30 HOH HOH . 
D 4 HOH A 12 612 14 HOH HOH . 
D 4 HOH A 13 613 9 HOH HOH . 
D 4 HOH A 14 614 29 HOH HOH . 
D 4 HOH A 15 615 10 HOH HOH . 
D 4 HOH A 16 616 18 HOH HOH . 
D 4 HOH A 17 617 19 HOH HOH . 
D 4 HOH A 18 618 31 HOH HOH . 
D 4 HOH A 19 619 22 HOH HOH . 
D 4 HOH A 20 620 26 HOH HOH . 
D 4 HOH A 21 621 32 HOH HOH . 
D 4 HOH A 22 622 24 HOH HOH . 
D 4 HOH A 23 623 2 HOH HOH . 
D 4 HOH A 24 624 8 HOH HOH . 
D 4 HOH A 25 625 20 HOH HOH . 
D 4 HOH A 26 626 12 HOH HOH . 
D 4 HOH A 27 627 27 HOH HOH . 
D 4 HOH A 28 628 6 HOH HOH . 
D 4 HOH A 29 629 16 HOH HOH . 
D 4 HOH A 30 630 25 HOH HOH . 
E 4 HOH C 1 701 23 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3 8FF . . . C 3 8.794 -2 27.508 1 46.09 ? O3 8FF 501 A 1 
HETATM 2 C C25 8FF . . . C 3 9.052 -0.819 27.332 1 44.81 ? C25 8FF 501 A 1 
HETATM 3 C C26 8FF . . . C 3 7.989 0.181 27.579 1 46.45 ? C26 8FF 501 A 1 
HETATM 4 N N1 8FF . . . C 3 6.746 -0.145 27.951 1 47.67 ? N1 8FF 501 A 1 
HETATM 5 C C29 8FF . . . C 3 6.046 0.993 28.075 1 48.37 ? C29 8FF 501 A 1 
HETATM 6 C C28 8FF . . . C 3 6.842 2.082 27.8 1 47.55 ? C28 8FF 501 A 1 
HETATM 7 C C27 8FF . . . C 3 8.074 1.564 27.484 1 48.14 ? C27 8FF 501 A 1 
HETATM 8 C C24 8FF . . . C 3 10.408 -0.313 26.882 1 42.69 ? C24 8FF 501 A 1 
HETATM 9 C C23 8FF . . . C 3 11.059 0.29 28.119 1 40.75 ? C23 8FF 501 A 1 
HETATM 10 C C22 8FF . . . C 3 12.232 1.225 27.865 1 38.39 ? C22 8FF 501 A 1 
HETATM 11 C C30 8FF . . . C 3 13.007 1.326 29.183 1 41.96 ? C30 8FF 501 A 1 
HETATM 12 C C31 8FF . . . C 3 14.401 0.691 29.121 1 44.23 ? C31 8FF 501 A 1 
HETATM 13 C C32 8FF . . . C 3 14.442 -0.792 28.778 1 44.81 ? C32 8FF 501 A 1 
HETATM 14 C C33 8FF . . . C 3 15.858 -1.303 28.964 1 46.95 ? C33 8FF 501 A 1 
HETATM 15 C C20 8FF . . . C 3 11.824 2.603 27.347 1 35.01 ? C20 8FF 501 A 1 
HETATM 16 C C21 8FF . . . C 3 11.039 3.428 28.368 1 35.56 ? C21 8FF 501 A 1 
HETATM 17 C C17 8FF . . . C 3 13.048 3.383 26.826 1 32.66 ? C17 8FF 501 A 1 
HETATM 18 C C13 8FF . . . C 3 12.807 4.74 26.136 1 30.36 ? C13 8FF 501 A 1 
HETATM 19 C C18 8FF . . . C 3 11.752 4.596 25.013 1 29.91 ? C18 8FF 501 A 1 
HETATM 20 C C12 8FF . . . C 3 12.482 5.941 27.039 1 29.55 ? C12 8FF 501 A 1 
HETATM 21 C C11 8FF . . . C 3 12.633 7.311 26.353 1 28.38 ? C11 8FF 501 A 1 
HETATM 22 C C9 8FF . . . C 3 13.935 7.434 25.561 1 28.29 ? C9 8FF 501 A 1 
HETATM 23 C C16 8FF . . . C 3 13.877 2.59 25.793 1 31.97 ? C16 8FF 501 A 1 
HETATM 24 C C15 8FF . . . C 3 14.605 3.629 24.936 1 31.56 ? C15 8FF 501 A 1 
HETATM 25 C C14 8FF . . . C 3 14.179 4.977 25.531 1 29.69 ? C14 8FF 501 A 1 
HETATM 26 C C8 8FF . . . C 3 14.091 6.212 24.673 1 27.56 ? C8 8FF 501 A 1 
HETATM 27 C C7 8FF . . . C 3 14.125 6.222 23.314 1 24.57 ? C7 8FF 501 A 1 
HETATM 28 C C6 8FF . . . C 3 13.991 7.468 22.54 1 22.92 ? C6 8FF 501 A 1 
HETATM 29 C C5 8FF . . . C 3 13.892 7.514 21.195 1 21.05 ? C5 8FF 501 A 1 
HETATM 30 C C10 8FF . . . C 3 13.929 6.248 20.361 1 20.41 ? C10 8FF 501 A 1 
HETATM 31 C C4 8FF . . . C 3 13.726 8.881 20.579 1 20.27 ? C4 8FF 501 A 1 
HETATM 32 C C3 8FF . . . C 3 14.408 8.986 19.231 1 19.78 ? C3 8FF 501 A 1 
HETATM 33 O O1 8FF . . . C 3 15.836 8.982 19.376 1 19.11 ? O1 8FF 501 A 1 
HETATM 34 C C2 8FF . . . C 3 13.902 7.82 18.432 1 19.75 ? C2 8FF 501 A 1 
HETATM 35 C C19 8FF . . . C 3 13.18 8.025 17.342 1 19.53 ? C19 8FF 501 A 1 
HETATM 36 C C1 8FF . . . C 3 14.245 6.438 18.888 1 19.97 ? C1 8FF 501 A 1 
HETATM 37 O O2 8FF . . . C 3 13.535 5.445 18.141 1 19.86 ? O2 8FF 501 A 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           37 
#