data_5XV7 # _model_server_result.job_id pDV3y7lM27fTYK3EsoKQAA _model_server_result.datetime_utc '2024-10-19 09:23:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xv7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":705}' # _entry.id 5XV7 # _exptl.entry_id 5XV7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.617 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 9-ethyl-6,6-dimethyl-8-[4-(morpholin-4-yl)piperidin-1-yl]-11-oxo-6,11-dihydro-5H-benzo[b]carbazole-3-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5XV7 _cell.length_a 74.767 _cell.length_b 74.767 _cell.length_c 310.687 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XV7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H34 N4 O2' _chem_comp.formula_weight 482.617 _chem_comp.id EMH _chem_comp.mon_nstd_flag . _chem_comp.name 9-ethyl-6,6-dimethyl-8-[4-(morpholin-4-yl)piperidin-1-yl]-11-oxo-6,11-dihydro-5H-benzo[b]carbazole-3-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C6 EMH doub 92 n y C4 C2 EMH sing 93 n y C5 C6 EMH sing 94 n y C5 C18 EMH sing 95 n n C5 C3 EMH doub 96 n y C7 C8 EMH doub 97 n y C7 C2 EMH sing 98 n y C7 C16 EMH sing 99 n n C8 C17 EMH sing 100 n n C8 N9 EMH sing 101 n y C10 C12 EMH doub 102 n y C10 C11 EMH sing 103 n y C10 N25 EMH sing 104 n n C13 C15 EMH sing 105 n y C13 C11 EMH doub 106 n y C15 C14 EMH doub 107 n y C15 C16 EMH sing 108 n n C17 C21 EMH sing 109 n n C17 C22 EMH sing 110 n n C17 C14 EMH sing 111 n n C24 C23 EMH sing 112 n n C26 C28 EMH sing 113 n n C26 C27 EMH sing 114 n n C26 N31 EMH sing 115 n n C28 C30 EMH sing 116 n n N19 C18 EMH trip 117 n n C3 C1 EMH sing 118 n y C1 C2 EMH doub 119 n y C1 N9 EMH sing 120 n y C14 C12 EMH sing 121 n y C16 O20 EMH doub 122 n n C11 C23 EMH sing 123 n n N25 C29 EMH sing 124 n n N25 C30 EMH sing 125 n n C29 C27 EMH sing 126 n n N31 C32 EMH sing 127 n n N31 C33 EMH sing 128 n n C32 C34 EMH sing 129 n n C34 O36 EMH sing 130 n n O36 C35 EMH sing 131 n n C35 C33 EMH sing 132 n n C4 H4 EMH sing 133 n n C6 H6 EMH sing 134 n n C13 H13 EMH sing 135 n n C21 H21 EMH sing 136 n n C21 H21A EMH sing 137 n n C21 H21B EMH sing 138 n n C22 H22 EMH sing 139 n n C22 H22A EMH sing 140 n n C22 H22B EMH sing 141 n n C24 H24 EMH sing 142 n n C24 H24A EMH sing 143 n n C24 H24B EMH sing 144 n n C26 H26 EMH sing 145 n n C28 H28 EMH sing 146 n n C28 H28A EMH sing 147 n n C3 H3 EMH sing 148 n n C12 H12 EMH sing 149 n n C23 H23 EMH sing 150 n n C23 H23A EMH sing 151 n n C29 H29 EMH sing 152 n n C29 H29A EMH sing 153 n n C27 H27 EMH sing 154 n n C27 H27A EMH sing 155 n n C30 H30 EMH sing 156 n n C30 H30A EMH sing 157 n n C32 H32 EMH sing 158 n n C32 H32A EMH sing 159 n n C34 H34 EMH sing 160 n n C34 H34A EMH sing 161 n n C35 H35 EMH sing 162 n n C35 H35A EMH sing 163 n n C33 H33 EMH sing 164 n n C33 H33A EMH sing 165 n n N9 H9 EMH sing 166 n n # _atom_sites.entry_id 5XV7 _atom_sites.fract_transf_matrix[1][1] 0.013375 _atom_sites.fract_transf_matrix[1][2] 0.007722 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015444 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 701 3 EDO EDO . C 2 EDO A 1 702 4 EDO EDO . D 2 EDO A 1 703 5 EDO EDO . E 2 EDO A 1 704 6 EDO EDO . F 3 EMH A 1 705 901 EMH EMH . G 4 HOH A 1 801 17 HOH HOH . G 4 HOH A 2 802 30 HOH HOH . G 4 HOH A 3 803 7 HOH HOH . G 4 HOH A 4 804 21 HOH HOH . G 4 HOH A 5 805 35 HOH HOH . G 4 HOH A 6 806 2 HOH HOH . G 4 HOH A 7 807 8 HOH HOH . G 4 HOH A 8 808 32 HOH HOH . G 4 HOH A 9 809 22 HOH HOH . G 4 HOH A 10 810 16 HOH HOH . G 4 HOH A 11 811 1 HOH HOH . G 4 HOH A 12 812 4 HOH HOH . G 4 HOH A 13 813 5 HOH HOH . G 4 HOH A 14 814 33 HOH HOH . G 4 HOH A 15 815 25 HOH HOH . G 4 HOH A 16 816 6 HOH HOH . G 4 HOH A 17 817 26 HOH HOH . G 4 HOH A 18 818 14 HOH HOH . G 4 HOH A 19 819 19 HOH HOH . G 4 HOH A 20 820 20 HOH HOH . G 4 HOH A 21 821 15 HOH HOH . G 4 HOH A 22 822 9 HOH HOH . G 4 HOH A 23 823 10 HOH HOH . G 4 HOH A 24 824 27 HOH HOH . G 4 HOH A 25 825 28 HOH HOH . G 4 HOH A 26 826 18 HOH HOH . G 4 HOH A 27 827 24 HOH HOH . G 4 HOH A 28 828 23 HOH HOH . G 4 HOH A 29 829 13 HOH HOH . G 4 HOH A 30 830 29 HOH HOH . G 4 HOH A 31 831 34 HOH HOH . G 4 HOH A 32 832 3 HOH HOH . G 4 HOH A 33 833 31 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 EMH . . . F 3 98.949 9.415 338.616 1 24.8 ? C4 EMH 705 A 1 HETATM 2 C C5 EMH . . . F 3 97.115 10.909 338.953 1 24.16 ? C5 EMH 705 A 1 HETATM 3 C C6 EMH . . . F 3 97.558 9.609 338.738 1 21.97 ? C6 EMH 705 A 1 HETATM 4 C C7 EMH . . . F 3 101.151 10.55 338.544 1 26.22 ? C7 EMH 705 A 1 HETATM 5 C C8 EMH . . . F 3 101.507 11.856 338.679 1 25.75 ? C8 EMH 705 A 1 HETATM 6 C C10 EMH . . . F 3 106.092 10.769 337.667 1 34.79 ? C10 EMH 705 A 1 HETATM 7 C C13 EMH . . . F 3 104.377 9.074 337.712 1 32.49 ? C13 EMH 705 A 1 HETATM 8 C C15 EMH . . . F 3 103.407 10.011 338.09 1 31.93 ? C15 EMH 705 A 1 HETATM 9 C C17 EMH . . . F 3 102.832 12.354 338.608 1 28.64 ? C17 EMH 705 A 1 HETATM 10 C C21 EMH . . . F 3 103.259 13.036 339.922 1 28.86 ? C21 EMH 705 A 1 HETATM 11 C C22 EMH . . . F 3 102.798 13.461 337.5 1 29.28 ? C22 EMH 705 A 1 HETATM 12 C C24 EMH . . . F 3 106.393 7.109 337.688 1 36.32 ? C24 EMH 705 A 1 HETATM 13 C C26 EMH . . . F 3 110.049 12.26 337.306 1 40.03 ? C26 EMH 705 A 1 HETATM 14 C C28 EMH . . . F 3 109.647 11.086 336.464 1 38.78 ? C28 EMH 705 A 1 HETATM 15 N N19 EMH . . . F 3 94.63 11.43 339.217 1 29.18 ? N19 EMH 705 A 1 HETATM 16 C C18 EMH . . . F 3 95.778 11.225 339.108 1 24.38 ? C18 EMH 705 A 1 HETATM 17 C C3 EMH . . . F 3 98.044 11.949 339.006 1 22.96 ? C3 EMH 705 A 1 HETATM 18 C C1 EMH . . . F 3 99.344 11.709 338.85 1 23.97 ? C1 EMH 705 A 1 HETATM 19 C C2 EMH . . . F 3 99.811 10.458 338.672 1 24.41 ? C2 EMH 705 A 1 HETATM 20 N N9 EMH . . . F 3 100.386 12.553 338.877 1 25.17 ? N9 EMH 705 A 1 HETATM 21 C C14 EMH . . . F 3 103.767 11.346 338.251 1 30.77 ? C14 EMH 705 A 1 HETATM 22 C C16 EMH . . . F 3 102.081 9.618 338.304 1 30.1 ? C16 EMH 705 A 1 HETATM 23 O O20 EMH . . . F 3 101.776 8.431 338.168 1 31.76 ? O20 EMH 705 A 1 HETATM 24 C C12 EMH . . . F 3 105.104 11.694 338.035 1 33.68 ? C12 EMH 705 A 1 HETATM 25 C C11 EMH . . . F 3 105.723 9.432 337.51 1 36.24 ? C11 EMH 705 A 1 HETATM 26 C C23 EMH . . . F 3 106.701 8.514 337.14 1 37.45 ? C23 EMH 705 A 1 HETATM 27 N N25 EMH . . . F 3 107.374 11.203 337.515 1 35.16 ? N25 EMH 705 A 1 HETATM 28 C C29 EMH . . . F 3 107.815 12.326 338.403 1 40.02 ? C29 EMH 705 A 1 HETATM 29 C C27 EMH . . . F 3 109.26 12.226 338.62 1 39.15 ? C27 EMH 705 A 1 HETATM 30 C C30 EMH . . . F 3 108.105 11.22 336.22 1 38.71 ? C30 EMH 705 A 1 HETATM 31 N N31 EMH . . . F 3 111.502 12.327 337.664 1 39.67 ? N31 EMH 705 A 1 HETATM 32 C C32 EMH . . . F 3 112.333 11.196 337.249 1 42.1 ? C32 EMH 705 A 1 HETATM 33 C C34 EMH . . . F 3 113.565 11.183 338.076 1 40.37 ? C34 EMH 705 A 1 HETATM 34 O O36 EMH . . . F 3 114.284 12.384 337.706 1 44.36 ? O36 EMH 705 A 1 HETATM 35 C C35 EMH . . . F 3 113.599 13.615 337.936 1 42.35 ? C35 EMH 705 A 1 HETATM 36 C C33 EMH . . . F 3 112.188 13.596 337.347 1 40.47 ? C33 EMH 705 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 36 #