data_5XVG # _model_server_result.job_id DA1z8mRaYFbpiV93Bday9A _model_server_result.datetime_utc '2025-03-12 05:35:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xvg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5XVG # _exptl.entry_id 5XVG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 411.888 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[6-chloranyl-4-[(5-cyclopropyl-1H-pyrazol-3-yl)amino]quinazolin-2-yl]-[(3R)-3-methylpiperazin-1-yl]methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5XVG _cell.length_a 42.169 _cell.length_b 64.914 _cell.length_c 99.279 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XVG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LYS 175 A LYS 473 1_555 A N SEP 176 A SEP 474 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale2 A C SEP 176 A SEP 474 1_555 A N LEU 177 A LEU 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? # _chem_comp.formula 'C20 H22 Cl N7 O' _chem_comp.formula_weight 411.888 _chem_comp.id 8FX _chem_comp.mon_nstd_flag . _chem_comp.name '[6-chloranyl-4-[(5-cyclopropyl-1H-pyrazol-3-yl)amino]quinazolin-2-yl]-[(3R)-3-methylpiperazin-1-yl]methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAY CAU 8FX sing 1 n n NAV CAU 8FX sing 2 n n NAV CAW 8FX sing 3 n n CAT CAU 8FX sing 4 n n CAT NAS 8FX sing 5 n n CAX NAS 8FX sing 6 n n CAX CAW 8FX sing 7 n n NAS CAR 8FX sing 8 n n CAR OAZ 8FX doub 9 n n CAR C2 8FX sing 10 n n N1 C2 8FX doub 11 n y N1 C6 8FX sing 12 n y CAD C6 8FX doub 13 n y CAD CAC 8FX sing 14 n y C2 N3 8FX sing 15 n y C6 C5 8FX sing 16 n y CAC CAB 8FX doub 17 n y N3 C4 8FX doub 18 n y C5 C4 8FX sing 19 n y C5 CAA 8FX doub 20 n y CAB CAA 8FX sing 21 n y CAB CL 8FX sing 22 n n C4 NAK 8FX sing 23 n n CBB CAQ 8FX sing 24 n n NAK CAL 8FX sing 25 n n CAM CAL 8FX sing 26 n y CAM CAN 8FX doub 27 n y CAL NAP 8FX doub 28 n y CAQ CAN 8FX sing 29 n n CAQ CBC 8FX sing 30 n n CAN NAO 8FX sing 31 n y NAP NAO 8FX sing 32 n y CAA H1 8FX sing 33 n n CAC H2 8FX sing 34 n n CAD H3 8FX sing 35 n n CAM H4 8FX sing 36 n n CAQ H5 8FX sing 37 n n CAT H6 8FX sing 38 n n CAT H7 8FX sing 39 n n CAU H8 8FX sing 40 n n CAW H9 8FX sing 41 n n CAW H10 8FX sing 42 n n CAX H11 8FX sing 43 n n CAX H12 8FX sing 44 n n CAY H13 8FX sing 45 n n CAY H14 8FX sing 46 n n CAY H15 8FX sing 47 n n CBB H16 8FX sing 48 n n CBB H17 8FX sing 49 n n CBC H19 8FX sing 50 n n CBC H20 8FX sing 51 n n NAK H22 8FX sing 52 n n NAO H23 8FX sing 53 n n NAV H24 8FX sing 54 n n CBB CBC 8FX sing 55 n n # _atom_sites.entry_id 5XVG _atom_sites.fract_transf_matrix[1][1] 0.023714 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015405 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010073 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8FX A 1 601 1 8FX DRG . C 3 EOH A 1 602 1 EOH EOH . D 3 EOH A 1 603 2 EOH EOH . E 3 EOH A 1 604 3 EOH EOH . F 3 EOH A 1 605 4 EOH EOH . G 3 EOH A 1 606 5 EOH EOH . H 4 EDO A 1 607 1 EDO EDO . I 4 EDO A 1 608 2 EDO EDO . J 4 EDO A 1 609 3 EDO EDO . K 5 HOH A 1 701 77 HOH HOH . K 5 HOH A 2 702 66 HOH HOH . K 5 HOH A 3 703 19 HOH HOH . K 5 HOH A 4 704 65 HOH HOH . K 5 HOH A 5 705 21 HOH HOH . K 5 HOH A 6 706 48 HOH HOH . K 5 HOH A 7 707 63 HOH HOH . K 5 HOH A 8 708 20 HOH HOH . K 5 HOH A 9 709 90 HOH HOH . K 5 HOH A 10 710 15 HOH HOH . K 5 HOH A 11 711 26 HOH HOH . K 5 HOH A 12 712 40 HOH HOH . K 5 HOH A 13 713 82 HOH HOH . K 5 HOH A 14 714 25 HOH HOH . K 5 HOH A 15 715 4 HOH HOH . K 5 HOH A 16 716 2 HOH HOH . K 5 HOH A 17 717 58 HOH HOH . K 5 HOH A 18 718 91 HOH HOH . K 5 HOH A 19 719 5 HOH HOH . K 5 HOH A 20 720 30 HOH HOH . K 5 HOH A 21 721 7 HOH HOH . K 5 HOH A 22 722 83 HOH HOH . K 5 HOH A 23 723 18 HOH HOH . K 5 HOH A 24 724 31 HOH HOH . K 5 HOH A 25 725 17 HOH HOH . K 5 HOH A 26 726 13 HOH HOH . K 5 HOH A 27 727 59 HOH HOH . K 5 HOH A 28 728 89 HOH HOH . K 5 HOH A 29 729 10 HOH HOH . K 5 HOH A 30 730 33 HOH HOH . K 5 HOH A 31 731 32 HOH HOH . K 5 HOH A 32 732 28 HOH HOH . K 5 HOH A 33 733 1 HOH HOH . K 5 HOH A 34 734 81 HOH HOH . K 5 HOH A 35 735 55 HOH HOH . K 5 HOH A 36 736 9 HOH HOH . K 5 HOH A 37 737 3 HOH HOH . K 5 HOH A 38 738 14 HOH HOH . K 5 HOH A 39 739 61 HOH HOH . K 5 HOH A 40 740 29 HOH HOH . K 5 HOH A 41 741 79 HOH HOH . K 5 HOH A 42 742 76 HOH HOH . K 5 HOH A 43 743 60 HOH HOH . K 5 HOH A 44 744 24 HOH HOH . K 5 HOH A 45 745 50 HOH HOH . K 5 HOH A 46 746 53 HOH HOH . K 5 HOH A 47 747 8 HOH HOH . K 5 HOH A 48 748 92 HOH HOH . K 5 HOH A 49 749 44 HOH HOH . K 5 HOH A 50 750 62 HOH HOH . K 5 HOH A 51 751 39 HOH HOH . K 5 HOH A 52 752 22 HOH HOH . K 5 HOH A 53 753 47 HOH HOH . K 5 HOH A 54 754 34 HOH HOH . K 5 HOH A 55 755 27 HOH HOH . K 5 HOH A 56 756 52 HOH HOH . K 5 HOH A 57 757 6 HOH HOH . K 5 HOH A 58 758 49 HOH HOH . K 5 HOH A 59 759 12 HOH HOH . K 5 HOH A 60 760 36 HOH HOH . K 5 HOH A 61 761 43 HOH HOH . K 5 HOH A 62 762 56 HOH HOH . K 5 HOH A 63 763 94 HOH HOH . K 5 HOH A 64 764 86 HOH HOH . K 5 HOH A 65 765 51 HOH HOH . K 5 HOH A 66 766 71 HOH HOH . K 5 HOH A 67 767 54 HOH HOH . K 5 HOH A 68 768 37 HOH HOH . K 5 HOH A 69 769 16 HOH HOH . K 5 HOH A 70 770 45 HOH HOH . K 5 HOH A 71 771 57 HOH HOH . K 5 HOH A 72 772 84 HOH HOH . K 5 HOH A 73 773 68 HOH HOH . K 5 HOH A 74 774 38 HOH HOH . K 5 HOH A 75 775 67 HOH HOH . K 5 HOH A 76 776 23 HOH HOH . K 5 HOH A 77 777 88 HOH HOH . K 5 HOH A 78 778 11 HOH HOH . K 5 HOH A 79 779 64 HOH HOH . K 5 HOH A 80 780 85 HOH HOH . K 5 HOH A 81 781 95 HOH HOH . K 5 HOH A 82 782 35 HOH HOH . K 5 HOH A 83 783 42 HOH HOH . K 5 HOH A 84 784 41 HOH HOH . K 5 HOH A 85 785 87 HOH HOH . K 5 HOH A 86 786 96 HOH HOH . K 5 HOH A 87 787 78 HOH HOH . K 5 HOH A 88 788 93 HOH HOH . K 5 HOH A 89 789 75 HOH HOH . K 5 HOH A 90 790 74 HOH HOH . K 5 HOH A 91 791 70 HOH HOH . K 5 HOH A 92 792 69 HOH HOH . K 5 HOH A 93 793 73 HOH HOH . K 5 HOH A 94 794 72 HOH HOH . K 5 HOH A 95 795 80 HOH HOH . K 5 HOH A 96 796 46 HOH HOH . K 5 HOH A 97 797 97 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 8FX . . . B 2 -7.013 -12.251 18.935 1 29.53 ? C4 8FX 601 A 1 HETATM 2 C C5 8FX . . . B 2 -7.072 -13.64 18.472 1 30.23 ? C5 8FX 601 A 1 HETATM 3 C C6 8FX . . . B 2 -6.271 -14.076 17.332 1 31.92 ? C6 8FX 601 A 1 HETATM 4 N N1 8FX . . . B 2 -5.444 -13.159 16.689 1 31.19 ? N1 8FX 601 A 1 HETATM 5 N N3 8FX . . . B 2 -6.229 -11.395 18.31 1 29.18 ? N3 8FX 601 A 1 HETATM 6 C C2 8FX . . . B 2 -5.414 -11.864 17.137 1 31.32 ? C2 8FX 601 A 1 HETATM 7 C CAA 8FX . . . B 2 -7.884 -14.539 19.091 1 28.81 ? CAA 8FX 601 A 1 HETATM 8 C CAB 8FX . . . B 2 -7.918 -15.958 18.599 1 33.53 ? CAB 8FX 601 A 1 HETATM 9 C CAC 8FX . . . B 2 -7.195 -16.361 17.559 1 29.95 ? CAC 8FX 601 A 1 HETATM 10 C CAD 8FX . . . B 2 -6.306 -15.364 16.872 1 32.82 ? CAD 8FX 601 A 1 HETATM 11 C CAL 8FX . . . B 2 -7.667 -10.475 20.63 1 30.45 ? CAL 8FX 601 A 1 HETATM 12 C CAM 8FX . . . B 2 -6.951 -9.324 20.18 1 28.66 ? CAM 8FX 601 A 1 HETATM 13 C CAN 8FX . . . B 2 -7.171 -8.301 21.089 1 27.8 ? CAN 8FX 601 A 1 HETATM 14 C CAQ 8FX . . . B 2 -6.569 -6.737 21.071 1 28.79 ? CAQ 8FX 601 A 1 HETATM 15 C CAR 8FX . . . B 2 -4.503 -10.885 16.449 1 32.37 ? CAR 8FX 601 A 1 HETATM 16 C CAT 8FX . . . B 2 -4.136 -8.902 15.059 1 31.59 ? CAT 8FX 601 A 1 HETATM 17 C CAU 8FX . . . B 2 -4.599 -7.468 15.233 1 33 ? CAU 8FX 601 A 1 HETATM 18 C CAW 8FX . . . B 2 -6.798 -8.161 15.784 1 34.09 ? CAW 8FX 601 A 1 HETATM 19 C CAX 8FX . . . B 2 -6.48 -9.644 15.582 1 29.29 ? CAX 8FX 601 A 1 HETATM 20 C CAY 8FX . . . B 2 -3.763 -6.589 14.322 1 35.02 ? CAY 8FX 601 A 1 HETATM 21 C CBB 8FX . . . B 2 -6.479 -6.211 19.841 1 27.29 ? CBB 8FX 601 A 1 HETATM 22 C CBC 8FX . . . B 2 -5.254 -6.716 21.33 1 31.99 ? CBC 8FX 601 A 1 HETATM 23 N NAK 8FX . . . B 2 -7.79 -11.796 20.045 1 30.01 ? NAK 8FX 601 A 1 HETATM 24 N NAO 8FX . . . B 2 -8.017 -8.797 22.08 1 29.57 ? NAO 8FX 601 A 1 HETATM 25 N NAP 8FX . . . B 2 -8.308 -10.132 21.792 1 26.52 ? NAP 8FX 601 A 1 HETATM 26 N NAS 8FX . . . B 2 -5.052 -9.81 15.691 1 29.77 ? NAS 8FX 601 A 1 HETATM 27 N NAV 8FX . . . B 2 -5.987 -7.344 14.907 1 30.93 ? NAV 8FX 601 A 1 HETATM 28 O OAZ 8FX . . . B 2 -3.304 -11.035 16.553 1 36.13 ? OAZ 8FX 601 A 1 HETATM 29 CL CL 8FX . . . B 2 -8.953 -17.072 19.419 1 33.18 ? CL 8FX 601 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 29 #