data_5XX4 # _model_server_result.job_id sEdu3h9QMPUWOu4D752pLw _model_server_result.datetime_utc '2024-12-26 11:06:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xx4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":4003}' # _entry.id 5XX4 # _exptl.entry_id 5XX4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.44 _cell.angle_gamma 90 _cell.entry_id 5XX4 _cell.length_a 25.201 _cell.length_b 41.171 _cell.length_c 54.742 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XX4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 5 A CYS 5 1_555 A SG CYS 55 A CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? disulf ? disulf2 B SG CYS 5 B CYS 5 1_555 B SG CYS 55 B CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 269 n n S O2 SO4 doub 270 n n S O3 SO4 sing 271 n n S O4 SO4 sing 272 n n # _atom_sites.entry_id 5XX4 _atom_sites.fract_transf_matrix[1][1] 0.039681 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007312 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024289 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 4001 4001 SO4 SO4 . D 2 SO4 A 1 4002 4002 SO4 SO4 . E 2 SO4 A 1 4003 4001 SO4 SO4 . F 2 SO4 B 1 101 4002 SO4 SO4 . G 3 HOH A 1 4101 88 HOH HOH . G 3 HOH A 2 4102 282 HOH HOH . G 3 HOH A 3 4103 285 HOH HOH . G 3 HOH A 4 4104 262 HOH HOH . G 3 HOH A 5 4105 124 HOH HOH . G 3 HOH A 6 4106 106 HOH HOH . G 3 HOH A 7 4107 264 HOH HOH . G 3 HOH A 8 4108 136 HOH HOH . G 3 HOH A 9 4109 97 HOH HOH . G 3 HOH A 10 4110 30 HOH HOH . G 3 HOH A 11 4111 102 HOH HOH . G 3 HOH A 12 4112 272 HOH HOH . G 3 HOH A 13 4113 144 HOH HOH . G 3 HOH A 14 4114 37 HOH HOH . G 3 HOH A 15 4115 100 HOH HOH . G 3 HOH A 16 4116 91 HOH HOH . G 3 HOH A 17 4117 16 HOH HOH . G 3 HOH A 18 4118 130 HOH HOH . G 3 HOH A 19 4119 303 HOH HOH . G 3 HOH A 20 4120 1 HOH HOH . G 3 HOH A 21 4121 68 HOH HOH . G 3 HOH A 22 4122 266 HOH HOH . G 3 HOH A 23 4123 64 HOH HOH . G 3 HOH A 24 4124 41 HOH HOH . G 3 HOH A 25 4125 161 HOH HOH . G 3 HOH A 26 4126 112 HOH HOH . G 3 HOH A 27 4127 7 HOH HOH . G 3 HOH A 28 4128 20 HOH HOH . G 3 HOH A 29 4129 46 HOH HOH . G 3 HOH A 30 4130 247 HOH HOH . G 3 HOH A 31 4131 278 HOH HOH . G 3 HOH A 32 4132 292 HOH HOH . G 3 HOH A 33 4133 6 HOH HOH . G 3 HOH A 34 4134 40 HOH HOH . G 3 HOH A 35 4135 32 HOH HOH . G 3 HOH A 36 4136 62 HOH HOH . G 3 HOH A 37 4137 90 HOH HOH . G 3 HOH A 38 4138 28 HOH HOH . G 3 HOH A 39 4139 271 HOH HOH . G 3 HOH A 40 4140 74 HOH HOH . G 3 HOH A 41 4141 79 HOH HOH . G 3 HOH A 42 4142 95 HOH HOH . G 3 HOH A 43 4143 29 HOH HOH . G 3 HOH A 44 4144 302 HOH HOH . G 3 HOH A 45 4145 4 HOH HOH . G 3 HOH A 46 4146 47 HOH HOH . G 3 HOH A 47 4147 27 HOH HOH . G 3 HOH A 48 4148 109 HOH HOH . G 3 HOH A 49 4149 126 HOH HOH . G 3 HOH A 50 4150 269 HOH HOH . G 3 HOH A 51 4151 83 HOH HOH . G 3 HOH A 52 4152 108 HOH HOH . G 3 HOH A 53 4153 81 HOH HOH . G 3 HOH A 54 4154 60 HOH HOH . G 3 HOH A 55 4155 110 HOH HOH . G 3 HOH A 56 4156 10 HOH HOH . G 3 HOH A 57 4157 21 HOH HOH . G 3 HOH A 58 4158 293 HOH HOH . G 3 HOH A 59 4159 17 HOH HOH . G 3 HOH A 60 4160 281 HOH HOH . G 3 HOH A 61 4161 18 HOH HOH . G 3 HOH A 62 4162 3 HOH HOH . G 3 HOH A 63 4163 180 HOH HOH . G 3 HOH A 64 4164 31 HOH HOH . G 3 HOH A 65 4165 141 HOH HOH . G 3 HOH A 66 4166 277 HOH HOH . G 3 HOH A 67 4167 182 HOH HOH . G 3 HOH A 68 4168 52 HOH HOH . G 3 HOH A 69 4169 11 HOH HOH . G 3 HOH A 70 4170 24 HOH HOH . G 3 HOH A 71 4171 26 HOH HOH . G 3 HOH A 72 4172 115 HOH HOH . G 3 HOH A 73 4173 75 HOH HOH . G 3 HOH A 74 4174 73 HOH HOH . G 3 HOH A 75 4175 270 HOH HOH . G 3 HOH A 76 4176 226 HOH HOH . G 3 HOH A 77 4177 186 HOH HOH . G 3 HOH A 78 4178 147 HOH HOH . G 3 HOH A 79 4179 5 HOH HOH . G 3 HOH A 80 4180 279 HOH HOH . G 3 HOH A 81 4181 93 HOH HOH . G 3 HOH A 82 4182 42 HOH HOH . G 3 HOH A 83 4183 107 HOH HOH . G 3 HOH A 84 4184 219 HOH HOH . G 3 HOH A 85 4185 71 HOH HOH . G 3 HOH A 86 4186 248 HOH HOH . G 3 HOH A 87 4187 263 HOH HOH . G 3 HOH A 88 4188 82 HOH HOH . G 3 HOH A 89 4189 200 HOH HOH . G 3 HOH A 90 4190 236 HOH HOH . G 3 HOH A 91 4191 202 HOH HOH . G 3 HOH A 92 4192 92 HOH HOH . G 3 HOH A 93 4193 137 HOH HOH . G 3 HOH A 94 4194 89 HOH HOH . G 3 HOH A 95 4195 218 HOH HOH . G 3 HOH A 96 4196 221 HOH HOH . G 3 HOH A 97 4197 215 HOH HOH . G 3 HOH A 98 4198 238 HOH HOH . G 3 HOH A 99 4199 66 HOH HOH . G 3 HOH A 100 4200 43 HOH HOH . G 3 HOH A 101 4201 19 HOH HOH . G 3 HOH A 102 4202 57 HOH HOH . G 3 HOH A 103 4203 65 HOH HOH . G 3 HOH A 104 4204 276 HOH HOH . G 3 HOH A 105 4205 143 HOH HOH . G 3 HOH A 106 4206 150 HOH HOH . G 3 HOH A 107 4207 125 HOH HOH . G 3 HOH A 108 4208 103 HOH HOH . G 3 HOH A 109 4209 230 HOH HOH . G 3 HOH A 110 4210 232 HOH HOH . G 3 HOH A 111 4211 149 HOH HOH . G 3 HOH A 112 4212 284 HOH HOH . G 3 HOH A 113 4213 301 HOH HOH . G 3 HOH A 114 4214 193 HOH HOH . G 3 HOH A 115 4215 268 HOH HOH . G 3 HOH A 116 4216 148 HOH HOH . G 3 HOH A 117 4217 249 HOH HOH . G 3 HOH A 118 4218 72 HOH HOH . G 3 HOH A 119 4219 170 HOH HOH . G 3 HOH A 120 4220 283 HOH HOH . G 3 HOH A 121 4221 59 HOH HOH . G 3 HOH A 122 4222 217 HOH HOH . G 3 HOH A 123 4223 69 HOH HOH . G 3 HOH A 124 4224 86 HOH HOH . G 3 HOH A 125 4225 243 HOH HOH . G 3 HOH A 126 4226 290 HOH HOH . G 3 HOH A 127 4227 280 HOH HOH . G 3 HOH A 128 4228 119 HOH HOH . G 3 HOH A 129 4229 152 HOH HOH . G 3 HOH A 130 4230 229 HOH HOH . G 3 HOH A 131 4231 275 HOH HOH . G 3 HOH A 132 4232 22 HOH HOH . G 3 HOH A 133 4233 153 HOH HOH . G 3 HOH A 134 4234 220 HOH HOH . G 3 HOH A 135 4235 305 HOH HOH . G 3 HOH A 136 4236 265 HOH HOH . G 3 HOH A 137 4237 245 HOH HOH . G 3 HOH A 138 4238 216 HOH HOH . G 3 HOH A 139 4239 242 HOH HOH . H 3 HOH B 1 201 254 HOH HOH . H 3 HOH B 2 202 214 HOH HOH . H 3 HOH B 3 203 261 HOH HOH . H 3 HOH B 4 204 256 HOH HOH . H 3 HOH B 5 205 121 HOH HOH . H 3 HOH B 6 206 142 HOH HOH . H 3 HOH B 7 207 58 HOH HOH . H 3 HOH B 8 208 174 HOH HOH . H 3 HOH B 9 209 56 HOH HOH . H 3 HOH B 10 210 2 HOH HOH . H 3 HOH B 11 211 55 HOH HOH . H 3 HOH B 12 212 295 HOH HOH . H 3 HOH B 13 213 260 HOH HOH . H 3 HOH B 14 214 224 HOH HOH . H 3 HOH B 15 215 87 HOH HOH . H 3 HOH B 16 216 53 HOH HOH . H 3 HOH B 17 217 111 HOH HOH . H 3 HOH B 18 218 76 HOH HOH . H 3 HOH B 19 219 196 HOH HOH . H 3 HOH B 20 220 251 HOH HOH . H 3 HOH B 21 221 176 HOH HOH . H 3 HOH B 22 222 135 HOH HOH . H 3 HOH B 23 223 304 HOH HOH . H 3 HOH B 24 224 267 HOH HOH . H 3 HOH B 25 225 288 HOH HOH . H 3 HOH B 26 226 99 HOH HOH . H 3 HOH B 27 227 49 HOH HOH . H 3 HOH B 28 228 163 HOH HOH . H 3 HOH B 29 229 189 HOH HOH . H 3 HOH B 30 230 198 HOH HOH . H 3 HOH B 31 231 67 HOH HOH . H 3 HOH B 32 232 96 HOH HOH . H 3 HOH B 33 233 13 HOH HOH . H 3 HOH B 34 234 33 HOH HOH . H 3 HOH B 35 235 133 HOH HOH . H 3 HOH B 36 236 274 HOH HOH . H 3 HOH B 37 237 104 HOH HOH . H 3 HOH B 38 238 134 HOH HOH . H 3 HOH B 39 239 36 HOH HOH . H 3 HOH B 40 240 291 HOH HOH . H 3 HOH B 41 241 14 HOH HOH . H 3 HOH B 42 242 39 HOH HOH . H 3 HOH B 43 243 63 HOH HOH . H 3 HOH B 44 244 192 HOH HOH . H 3 HOH B 45 245 164 HOH HOH . H 3 HOH B 46 246 85 HOH HOH . H 3 HOH B 47 247 15 HOH HOH . H 3 HOH B 48 248 139 HOH HOH . H 3 HOH B 49 249 51 HOH HOH . H 3 HOH B 50 250 178 HOH HOH . H 3 HOH B 51 251 54 HOH HOH . H 3 HOH B 52 252 286 HOH HOH . H 3 HOH B 53 253 25 HOH HOH . H 3 HOH B 54 254 80 HOH HOH . H 3 HOH B 55 255 255 HOH HOH . H 3 HOH B 56 256 117 HOH HOH . H 3 HOH B 57 257 35 HOH HOH . H 3 HOH B 58 258 8 HOH HOH . H 3 HOH B 59 259 12 HOH HOH . H 3 HOH B 60 260 23 HOH HOH . H 3 HOH B 61 261 61 HOH HOH . H 3 HOH B 62 262 259 HOH HOH . H 3 HOH B 63 263 298 HOH HOH . H 3 HOH B 64 264 159 HOH HOH . H 3 HOH B 65 265 287 HOH HOH . H 3 HOH B 66 266 258 HOH HOH . H 3 HOH B 67 267 257 HOH HOH . H 3 HOH B 68 268 94 HOH HOH . H 3 HOH B 69 269 297 HOH HOH . H 3 HOH B 70 270 70 HOH HOH . H 3 HOH B 71 271 98 HOH HOH . H 3 HOH B 72 272 253 HOH HOH . H 3 HOH B 73 273 78 HOH HOH . H 3 HOH B 74 274 77 HOH HOH . H 3 HOH B 75 275 131 HOH HOH . H 3 HOH B 76 276 300 HOH HOH . H 3 HOH B 77 277 250 HOH HOH . H 3 HOH B 78 278 50 HOH HOH . H 3 HOH B 79 279 244 HOH HOH . H 3 HOH B 80 280 252 HOH HOH . H 3 HOH B 81 281 116 HOH HOH . H 3 HOH B 82 282 223 HOH HOH . H 3 HOH B 83 283 227 HOH HOH . H 3 HOH B 84 284 289 HOH HOH . H 3 HOH B 85 285 212 HOH HOH . H 3 HOH B 86 286 157 HOH HOH . H 3 HOH B 87 287 211 HOH HOH . H 3 HOH B 88 288 118 HOH HOH . H 3 HOH B 89 289 273 HOH HOH . H 3 HOH B 90 290 296 HOH HOH . H 3 HOH B 91 291 246 HOH HOH . H 3 HOH B 92 292 294 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 2 5.285 14.267 14.037 1 36.8 ? S SO4 4003 A 1 HETATM 2 O O1 SO4 . . . E 2 5.148 15.754 14.236 1 32.2 ? O1 SO4 4003 A 1 HETATM 3 O O2 SO4 . . . E 2 5.012 13.818 12.615 1 22.23 ? O2 SO4 4003 A 1 HETATM 4 O O3 SO4 . . . E 2 4.338 13.704 15.057 1 32.25 ? O3 SO4 4003 A 1 HETATM 5 O O4 SO4 . . . E 2 6.729 13.851 14.37 1 34.41 ? O4 SO4 4003 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #