data_5XX5
#
_model_server_result.job_id            gevH0LW0v9sHS7bVKHj9aQ 
_model_server_result.datetime_utc      '2024-11-05 04:44:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5xx5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":102}' 
#
_entry.id    5XX5 
#
_exptl.entry_id    5XX5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.35 
_cell.angle_gamma         90 
_cell.entry_id            5XX5 
_cell.length_a            25.189 
_cell.length_b            41.306 
_cell.length_c            53.94 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5XX5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 5 A CYS 5 1_555 A SG CYS 55 A CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? 
disulf ? disulf2 B SG CYS 5 B CYS 5 1_555 B SG CYS 55 B CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 269 n n 
S O2 SO4 doub 270 n n 
S O3 SO4 sing 271 n n 
S O4 SO4 sing 272 n n 
#
_atom_sites.entry_id                     5XX5 
_atom_sites.fract_transf_matrix[1][1]    0.0397 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006535 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02421 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018789 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 101 1 SO4 SO4 . 
D 2 SO4 A 1 102 2 SO4 SO4 . 
E 2 SO4 B 1 101 3 SO4 SO4 . 
F 3 HOH A 1 201 242 HOH HOH . 
F 3 HOH A 2 202 115 HOH HOH . 
F 3 HOH A 3 203 234 HOH HOH . 
F 3 HOH A 4 204 275 HOH HOH . 
F 3 HOH A 5 205 146 HOH HOH . 
F 3 HOH A 6 206 230 HOH HOH . 
F 3 HOH A 7 207 41 HOH HOH . 
F 3 HOH A 8 208 5 HOH HOH . 
F 3 HOH A 9 209 74 HOH HOH . 
F 3 HOH A 10 210 62 HOH HOH . 
F 3 HOH A 11 211 72 HOH HOH . 
F 3 HOH A 12 212 36 HOH HOH . 
F 3 HOH A 13 213 27 HOH HOH . 
F 3 HOH A 14 214 217 HOH HOH . 
F 3 HOH A 15 215 2 HOH HOH . 
F 3 HOH A 16 216 237 HOH HOH . 
F 3 HOH A 17 217 15 HOH HOH . 
F 3 HOH A 18 218 220 HOH HOH . 
F 3 HOH A 19 219 46 HOH HOH . 
F 3 HOH A 20 220 219 HOH HOH . 
F 3 HOH A 21 221 177 HOH HOH . 
F 3 HOH A 22 222 69 HOH HOH . 
F 3 HOH A 23 223 262 HOH HOH . 
F 3 HOH A 24 224 64 HOH HOH . 
F 3 HOH A 25 225 238 HOH HOH . 
F 3 HOH A 26 226 21 HOH HOH . 
F 3 HOH A 27 227 9 HOH HOH . 
F 3 HOH A 28 228 19 HOH HOH . 
F 3 HOH A 29 229 57 HOH HOH . 
F 3 HOH A 30 230 42 HOH HOH . 
F 3 HOH A 31 231 3 HOH HOH . 
F 3 HOH A 32 232 17 HOH HOH . 
F 3 HOH A 33 233 34 HOH HOH . 
F 3 HOH A 34 234 89 HOH HOH . 
F 3 HOH A 35 235 102 HOH HOH . 
F 3 HOH A 36 236 60 HOH HOH . 
F 3 HOH A 37 237 93 HOH HOH . 
F 3 HOH A 38 238 111 HOH HOH . 
F 3 HOH A 39 239 265 HOH HOH . 
F 3 HOH A 40 240 81 HOH HOH . 
F 3 HOH A 41 241 45 HOH HOH . 
F 3 HOH A 42 242 132 HOH HOH . 
F 3 HOH A 43 243 12 HOH HOH . 
F 3 HOH A 44 244 204 HOH HOH . 
F 3 HOH A 45 245 23 HOH HOH . 
F 3 HOH A 46 246 218 HOH HOH . 
F 3 HOH A 47 247 7 HOH HOH . 
F 3 HOH A 48 248 203 HOH HOH . 
F 3 HOH A 49 249 233 HOH HOH . 
F 3 HOH A 50 250 153 HOH HOH . 
F 3 HOH A 51 251 25 HOH HOH . 
F 3 HOH A 52 252 35 HOH HOH . 
F 3 HOH A 53 253 59 HOH HOH . 
F 3 HOH A 54 254 63 HOH HOH . 
F 3 HOH A 55 255 33 HOH HOH . 
F 3 HOH A 56 256 215 HOH HOH . 
F 3 HOH A 57 257 243 HOH HOH . 
F 3 HOH A 58 258 80 HOH HOH . 
F 3 HOH A 59 259 257 HOH HOH . 
F 3 HOH A 60 260 126 HOH HOH . 
F 3 HOH A 61 261 49 HOH HOH . 
F 3 HOH A 62 262 54 HOH HOH . 
F 3 HOH A 63 263 212 HOH HOH . 
F 3 HOH A 64 264 205 HOH HOH . 
F 3 HOH A 65 265 11 HOH HOH . 
F 3 HOH A 66 266 225 HOH HOH . 
F 3 HOH A 67 267 39 HOH HOH . 
F 3 HOH A 68 268 97 HOH HOH . 
F 3 HOH A 69 269 159 HOH HOH . 
F 3 HOH A 70 270 8 HOH HOH . 
F 3 HOH A 71 271 16 HOH HOH . 
F 3 HOH A 72 272 231 HOH HOH . 
F 3 HOH A 73 273 24 HOH HOH . 
F 3 HOH A 74 274 263 HOH HOH . 
F 3 HOH A 75 275 14 HOH HOH . 
F 3 HOH A 76 276 236 HOH HOH . 
F 3 HOH A 77 278 112 HOH HOH . 
F 3 HOH A 78 280 58 HOH HOH . 
F 3 HOH A 79 281 158 HOH HOH . 
F 3 HOH A 80 282 198 HOH HOH . 
F 3 HOH A 81 283 184 HOH HOH . 
F 3 HOH A 82 284 155 HOH HOH . 
F 3 HOH A 83 285 48 HOH HOH . 
F 3 HOH A 84 286 200 HOH HOH . 
F 3 HOH A 85 288 256 HOH HOH . 
F 3 HOH A 86 289 134 HOH HOH . 
F 3 HOH A 87 290 88 HOH HOH . 
F 3 HOH A 88 291 273 HOH HOH . 
F 3 HOH A 89 292 86 HOH HOH . 
F 3 HOH A 90 293 195 HOH HOH . 
F 3 HOH A 91 294 66 HOH HOH . 
F 3 HOH A 92 295 148 HOH HOH . 
F 3 HOH A 93 296 52 HOH HOH . 
F 3 HOH A 94 297 84 HOH HOH . 
F 3 HOH A 95 298 190 HOH HOH . 
F 3 HOH A 96 299 183 HOH HOH . 
F 3 HOH A 97 300 170 HOH HOH . 
F 3 HOH A 98 301 193 HOH HOH . 
F 3 HOH A 99 302 99 HOH HOH . 
F 3 HOH A 100 303 246 HOH HOH . 
F 3 HOH A 101 304 26 HOH HOH . 
F 3 HOH A 102 305 197 HOH HOH . 
F 3 HOH A 103 306 252 HOH HOH . 
F 3 HOH A 104 307 264 HOH HOH . 
F 3 HOH A 105 308 227 HOH HOH . 
F 3 HOH A 106 309 229 HOH HOH . 
F 3 HOH A 107 310 266 HOH HOH . 
F 3 HOH A 108 311 83 HOH HOH . 
F 3 HOH A 109 312 137 HOH HOH . 
F 3 HOH A 110 313 258 HOH HOH . 
F 3 HOH A 111 314 228 HOH HOH . 
F 3 HOH A 112 315 214 HOH HOH . 
F 3 HOH A 113 316 166 HOH HOH . 
F 3 HOH A 114 317 254 HOH HOH . 
F 3 HOH A 115 318 100 HOH HOH . 
F 3 HOH A 116 319 276 HOH HOH . 
F 3 HOH A 117 320 78 HOH HOH . 
F 3 HOH A 118 321 119 HOH HOH . 
F 3 HOH A 119 322 182 HOH HOH . 
F 3 HOH A 120 323 188 HOH HOH . 
F 3 HOH A 121 324 175 HOH HOH . 
F 3 HOH A 122 325 201 HOH HOH . 
F 3 HOH A 123 326 82 HOH HOH . 
F 3 HOH A 124 327 191 HOH HOH . 
F 3 HOH A 125 328 259 HOH HOH . 
F 3 HOH A 126 329 189 HOH HOH . 
F 3 HOH A 127 330 149 HOH HOH . 
G 3 HOH B 1 201 268 HOH HOH . 
G 3 HOH B 2 202 194 HOH HOH . 
G 3 HOH B 3 203 253 HOH HOH . 
G 3 HOH B 4 204 222 HOH HOH . 
G 3 HOH B 5 205 53 HOH HOH . 
G 3 HOH B 6 206 277 HOH HOH . 
G 3 HOH B 7 207 118 HOH HOH . 
G 3 HOH B 8 208 113 HOH HOH . 
G 3 HOH B 9 209 77 HOH HOH . 
G 3 HOH B 10 210 248 HOH HOH . 
G 3 HOH B 11 211 28 HOH HOH . 
G 3 HOH B 12 212 156 HOH HOH . 
G 3 HOH B 13 213 94 HOH HOH . 
G 3 HOH B 14 214 1 HOH HOH . 
G 3 HOH B 15 215 37 HOH HOH . 
G 3 HOH B 16 216 40 HOH HOH . 
G 3 HOH B 17 217 6 HOH HOH . 
G 3 HOH B 18 218 68 HOH HOH . 
G 3 HOH B 19 219 51 HOH HOH . 
G 3 HOH B 20 220 65 HOH HOH . 
G 3 HOH B 21 221 44 HOH HOH . 
G 3 HOH B 22 222 145 HOH HOH . 
G 3 HOH B 23 223 38 HOH HOH . 
G 3 HOH B 24 224 221 HOH HOH . 
G 3 HOH B 25 225 117 HOH HOH . 
G 3 HOH B 26 226 91 HOH HOH . 
G 3 HOH B 27 227 61 HOH HOH . 
G 3 HOH B 28 228 160 HOH HOH . 
G 3 HOH B 29 229 30 HOH HOH . 
G 3 HOH B 30 230 18 HOH HOH . 
G 3 HOH B 31 231 22 HOH HOH . 
G 3 HOH B 32 232 206 HOH HOH . 
G 3 HOH B 33 233 73 HOH HOH . 
G 3 HOH B 34 234 139 HOH HOH . 
G 3 HOH B 35 235 123 HOH HOH . 
G 3 HOH B 36 236 20 HOH HOH . 
G 3 HOH B 37 237 31 HOH HOH . 
G 3 HOH B 38 238 71 HOH HOH . 
G 3 HOH B 39 239 141 HOH HOH . 
G 3 HOH B 40 240 101 HOH HOH . 
G 3 HOH B 41 241 208 HOH HOH . 
G 3 HOH B 42 242 274 HOH HOH . 
G 3 HOH B 43 243 272 HOH HOH . 
G 3 HOH B 44 244 232 HOH HOH . 
G 3 HOH B 45 245 104 HOH HOH . 
G 3 HOH B 46 246 70 HOH HOH . 
G 3 HOH B 47 247 87 HOH HOH . 
G 3 HOH B 48 248 120 HOH HOH . 
G 3 HOH B 49 249 67 HOH HOH . 
G 3 HOH B 50 250 249 HOH HOH . 
G 3 HOH B 51 251 127 HOH HOH . 
G 3 HOH B 52 252 98 HOH HOH . 
G 3 HOH B 53 253 95 HOH HOH . 
G 3 HOH B 54 254 32 HOH HOH . 
G 3 HOH B 55 255 76 HOH HOH . 
G 3 HOH B 56 256 75 HOH HOH . 
G 3 HOH B 57 257 147 HOH HOH . 
G 3 HOH B 58 258 29 HOH HOH . 
G 3 HOH B 59 259 207 HOH HOH . 
G 3 HOH B 60 260 10 HOH HOH . 
G 3 HOH B 61 261 138 HOH HOH . 
G 3 HOH B 62 262 216 HOH HOH . 
G 3 HOH B 63 263 128 HOH HOH . 
G 3 HOH B 64 264 240 HOH HOH . 
G 3 HOH B 65 265 226 HOH HOH . 
G 3 HOH B 66 266 224 HOH HOH . 
G 3 HOH B 67 267 211 HOH HOH . 
G 3 HOH B 68 268 255 HOH HOH . 
G 3 HOH B 69 269 108 HOH HOH . 
G 3 HOH B 70 270 150 HOH HOH . 
G 3 HOH B 71 271 210 HOH HOH . 
G 3 HOH B 72 272 176 HOH HOH . 
G 3 HOH B 73 273 122 HOH HOH . 
G 3 HOH B 74 274 13 HOH HOH . 
G 3 HOH B 75 275 213 HOH HOH . 
G 3 HOH B 76 276 202 HOH HOH . 
G 3 HOH B 77 277 50 HOH HOH . 
G 3 HOH B 78 278 209 HOH HOH . 
G 3 HOH B 79 279 129 HOH HOH . 
G 3 HOH B 80 280 270 HOH HOH . 
G 3 HOH B 81 281 271 HOH HOH . 
G 3 HOH B 82 282 247 HOH HOH . 
G 3 HOH B 83 283 223 HOH HOH . 
G 3 HOH B 84 284 124 HOH HOH . 
G 3 HOH B 85 285 235 HOH HOH . 
G 3 HOH B 86 286 239 HOH HOH . 
G 3 HOH B 87 287 125 HOH HOH . 
G 3 HOH B 88 288 192 HOH HOH . 
G 3 HOH B 89 289 185 HOH HOH . 
G 3 HOH B 90 290 251 HOH HOH . 
G 3 HOH B 91 291 186 HOH HOH . 
G 3 HOH B 92 292 260 HOH HOH . 
G 3 HOH B 93 293 151 HOH HOH . 
G 3 HOH B 94 294 250 HOH HOH . 
G 3 HOH B 95 295 278 HOH HOH . 
G 3 HOH B 96 297 55 HOH HOH . 
G 3 HOH B 97 298 269 HOH HOH . 
G 3 HOH B 98 299 244 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . D 2 1.049 9.262 16.244 1 30.74 ? S SO4 102 A 1 
HETATM 2 O O1 SO4 . . . D 2 1.378 8.81 14.841 1 22.59 ? O1 SO4 102 A 1 
HETATM 3 O O2 SO4 . . . D 2 1.714 10.54 16.53 1 27.44 ? O2 SO4 102 A 1 
HETATM 4 O O3 SO4 . . . D 2 -0.371 9.677 16.68 1 21.53 ? O3 SO4 102 A 1 
HETATM 5 O O4 SO4 . . . D 2 1.456 7.98 16.924 1 32.9 ? O4 SO4 102 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           5 
#