data_5XX6 # _model_server_result.job_id MbPIWoVD0t_idBly9HXtYQ _model_server_result.datetime_utc '2024-10-10 22:28:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xx6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":4001}' # _entry.id 5XX6 # _exptl.entry_id 5XX6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.32 _cell.angle_gamma 90 _cell.entry_id 5XX6 _cell.length_a 25.163 _cell.length_b 41.284 _cell.length_c 53.928 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XX6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 5 A CYS 5 1_555 A SG CYS 55 A CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf2 B SG CYS 5 B CYS 5 1_555 B SG CYS 55 B CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 269 n n S O2 SO4 doub 270 n n S O3 SO4 sing 271 n n S O4 SO4 sing 272 n n # _atom_sites.entry_id 5XX6 _atom_sites.fract_transf_matrix[1][1] 0.039741 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006525 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024222 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018792 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 101 4002 SO4 SO4 . D 2 SO4 B 1 4001 4001 SO4 SO4 . E 2 SO4 B 1 4002 4002 SO4 SO4 . F 3 HOH A 1 201 53 HOH HOH . F 3 HOH A 2 202 92 HOH HOH . F 3 HOH A 3 203 273 HOH HOH . F 3 HOH A 4 204 274 HOH HOH . F 3 HOH A 5 205 242 HOH HOH . F 3 HOH A 6 206 143 HOH HOH . F 3 HOH A 7 207 23 HOH HOH . F 3 HOH A 8 208 34 HOH HOH . F 3 HOH A 9 209 152 HOH HOH . F 3 HOH A 10 211 7 HOH HOH . F 3 HOH A 11 212 267 HOH HOH . F 3 HOH A 12 213 338 HOH HOH . F 3 HOH A 13 214 87 HOH HOH . F 3 HOH A 14 215 215 HOH HOH . F 3 HOH A 15 216 33 HOH HOH . F 3 HOH A 16 217 2 HOH HOH . F 3 HOH A 17 218 21 HOH HOH . F 3 HOH A 18 219 37 HOH HOH . F 3 HOH A 19 220 357 HOH HOH . F 3 HOH A 20 221 55 HOH HOH . F 3 HOH A 21 222 136 HOH HOH . F 3 HOH A 22 223 122 HOH HOH . F 3 HOH A 23 224 247 HOH HOH . F 3 HOH A 24 225 22 HOH HOH . F 3 HOH A 25 226 15 HOH HOH . F 3 HOH A 26 227 314 HOH HOH . F 3 HOH A 27 228 24 HOH HOH . F 3 HOH A 28 229 241 HOH HOH . F 3 HOH A 29 230 43 HOH HOH . F 3 HOH A 30 231 319 HOH HOH . F 3 HOH A 31 232 175 HOH HOH . F 3 HOH A 32 233 3 HOH HOH . F 3 HOH A 33 234 321 HOH HOH . F 3 HOH A 34 235 257 HOH HOH . F 3 HOH A 35 236 14 HOH HOH . F 3 HOH A 36 237 50 HOH HOH . F 3 HOH A 37 238 69 HOH HOH . F 3 HOH A 38 239 325 HOH HOH . F 3 HOH A 39 240 156 HOH HOH . F 3 HOH A 40 241 71 HOH HOH . F 3 HOH A 41 242 245 HOH HOH . F 3 HOH A 42 243 111 HOH HOH . F 3 HOH A 43 244 8 HOH HOH . F 3 HOH A 44 245 236 HOH HOH . F 3 HOH A 45 246 120 HOH HOH . F 3 HOH A 46 247 40 HOH HOH . F 3 HOH A 47 248 9 HOH HOH . F 3 HOH A 48 249 67 HOH HOH . F 3 HOH A 49 250 359 HOH HOH . F 3 HOH A 50 251 344 HOH HOH . F 3 HOH A 51 252 337 HOH HOH . F 3 HOH A 52 253 318 HOH HOH . F 3 HOH A 53 254 86 HOH HOH . F 3 HOH A 54 255 233 HOH HOH . F 3 HOH A 55 256 161 HOH HOH . F 3 HOH A 56 257 249 HOH HOH . F 3 HOH A 57 258 153 HOH HOH . F 3 HOH A 58 259 4 HOH HOH . F 3 HOH A 59 260 228 HOH HOH . F 3 HOH A 60 261 18 HOH HOH . F 3 HOH A 61 262 166 HOH HOH . F 3 HOH A 62 263 342 HOH HOH . F 3 HOH A 63 264 270 HOH HOH . F 3 HOH A 64 265 114 HOH HOH . F 3 HOH A 65 266 163 HOH HOH . F 3 HOH A 66 267 178 HOH HOH . F 3 HOH A 67 268 45 HOH HOH . F 3 HOH A 68 269 174 HOH HOH . F 3 HOH A 69 270 141 HOH HOH . F 3 HOH A 70 271 289 HOH HOH . F 3 HOH A 71 272 72 HOH HOH . F 3 HOH A 72 273 29 HOH HOH . F 3 HOH A 73 274 313 HOH HOH . F 3 HOH A 74 275 11 HOH HOH . F 3 HOH A 75 276 6 HOH HOH . F 3 HOH A 76 277 179 HOH HOH . F 3 HOH A 77 278 315 HOH HOH . F 3 HOH A 78 279 126 HOH HOH . F 3 HOH A 79 280 12 HOH HOH . F 3 HOH A 80 281 13 HOH HOH . F 3 HOH A 81 282 60 HOH HOH . F 3 HOH A 82 283 317 HOH HOH . F 3 HOH A 83 284 16 HOH HOH . F 3 HOH A 84 285 26 HOH HOH . F 3 HOH A 85 286 63 HOH HOH . F 3 HOH A 86 287 48 HOH HOH . F 3 HOH A 87 288 238 HOH HOH . F 3 HOH A 88 289 335 HOH HOH . F 3 HOH A 89 290 5 HOH HOH . F 3 HOH A 90 291 352 HOH HOH . F 3 HOH A 91 292 81 HOH HOH . F 3 HOH A 92 293 20 HOH HOH . F 3 HOH A 93 294 340 HOH HOH . F 3 HOH A 94 296 57 HOH HOH . F 3 HOH A 95 297 109 HOH HOH . F 3 HOH A 96 298 77 HOH HOH . F 3 HOH A 97 299 188 HOH HOH . F 3 HOH A 98 300 135 HOH HOH . F 3 HOH A 99 302 235 HOH HOH . F 3 HOH A 100 303 252 HOH HOH . F 3 HOH A 101 304 36 HOH HOH . F 3 HOH A 102 305 256 HOH HOH . F 3 HOH A 103 306 19 HOH HOH . F 3 HOH A 104 307 220 HOH HOH . F 3 HOH A 105 308 68 HOH HOH . F 3 HOH A 106 309 275 HOH HOH . F 3 HOH A 107 310 142 HOH HOH . F 3 HOH A 108 311 288 HOH HOH . F 3 HOH A 109 312 160 HOH HOH . F 3 HOH A 110 313 56 HOH HOH . F 3 HOH A 111 314 243 HOH HOH . F 3 HOH A 112 315 332 HOH HOH . F 3 HOH A 113 316 227 HOH HOH . F 3 HOH A 114 317 64 HOH HOH . F 3 HOH A 115 318 244 HOH HOH . F 3 HOH A 116 319 269 HOH HOH . F 3 HOH A 117 320 182 HOH HOH . F 3 HOH A 118 321 173 HOH HOH . F 3 HOH A 119 322 348 HOH HOH . F 3 HOH A 120 323 96 HOH HOH . F 3 HOH A 121 324 331 HOH HOH . F 3 HOH A 122 325 328 HOH HOH . F 3 HOH A 123 326 253 HOH HOH . F 3 HOH A 124 327 363 HOH HOH . F 3 HOH A 125 328 264 HOH HOH . F 3 HOH A 126 329 176 HOH HOH . F 3 HOH A 127 330 89 HOH HOH . F 3 HOH A 128 331 107 HOH HOH . F 3 HOH A 129 332 240 HOH HOH . F 3 HOH A 130 333 17 HOH HOH . F 3 HOH A 131 334 216 HOH HOH . F 3 HOH A 132 335 110 HOH HOH . F 3 HOH A 133 336 223 HOH HOH . F 3 HOH A 134 337 162 HOH HOH . F 3 HOH A 135 338 90 HOH HOH . F 3 HOH A 136 339 271 HOH HOH . F 3 HOH A 137 340 213 HOH HOH . F 3 HOH A 138 341 349 HOH HOH . F 3 HOH A 139 342 356 HOH HOH . G 3 HOH B 1 4101 350 HOH HOH . G 3 HOH B 2 4102 258 HOH HOH . G 3 HOH B 3 4103 177 HOH HOH . G 3 HOH B 4 4104 138 HOH HOH . G 3 HOH B 5 4105 250 HOH HOH . G 3 HOH B 6 4106 58 HOH HOH . G 3 HOH B 7 4107 117 HOH HOH . G 3 HOH B 8 4108 82 HOH HOH . G 3 HOH B 9 4109 30 HOH HOH . G 3 HOH B 10 4110 84 HOH HOH . G 3 HOH B 11 4111 292 HOH HOH . G 3 HOH B 12 4112 116 HOH HOH . G 3 HOH B 13 4113 76 HOH HOH . G 3 HOH B 14 4114 38 HOH HOH . G 3 HOH B 15 4115 35 HOH HOH . G 3 HOH B 16 4116 123 HOH HOH . G 3 HOH B 17 4117 97 HOH HOH . G 3 HOH B 18 4118 187 HOH HOH . G 3 HOH B 19 4119 88 HOH HOH . G 3 HOH B 20 4120 1 HOH HOH . G 3 HOH B 21 4121 39 HOH HOH . G 3 HOH B 22 4122 322 HOH HOH . G 3 HOH B 23 4123 44 HOH HOH . G 3 HOH B 24 4124 25 HOH HOH . G 3 HOH B 25 4125 51 HOH HOH . G 3 HOH B 26 4126 74 HOH HOH . G 3 HOH B 27 4127 94 HOH HOH . G 3 HOH B 28 4128 262 HOH HOH . G 3 HOH B 29 4129 49 HOH HOH . G 3 HOH B 30 4130 230 HOH HOH . G 3 HOH B 31 4131 28 HOH HOH . G 3 HOH B 32 4132 341 HOH HOH . G 3 HOH B 33 4133 83 HOH HOH . G 3 HOH B 34 4134 73 HOH HOH . G 3 HOH B 35 4135 91 HOH HOH . G 3 HOH B 36 4136 100 HOH HOH . G 3 HOH B 37 4137 199 HOH HOH . G 3 HOH B 38 4138 193 HOH HOH . G 3 HOH B 39 4139 140 HOH HOH . G 3 HOH B 40 4140 300 HOH HOH . G 3 HOH B 41 4141 65 HOH HOH . G 3 HOH B 42 4142 62 HOH HOH . G 3 HOH B 43 4143 119 HOH HOH . G 3 HOH B 44 4144 265 HOH HOH . G 3 HOH B 45 4145 46 HOH HOH . G 3 HOH B 46 4146 361 HOH HOH . G 3 HOH B 47 4147 42 HOH HOH . G 3 HOH B 48 4148 75 HOH HOH . G 3 HOH B 49 4149 208 HOH HOH . G 3 HOH B 50 4150 105 HOH HOH . G 3 HOH B 51 4151 137 HOH HOH . G 3 HOH B 52 4152 59 HOH HOH . G 3 HOH B 53 4153 80 HOH HOH . G 3 HOH B 54 4154 32 HOH HOH . G 3 HOH B 55 4155 150 HOH HOH . G 3 HOH B 56 4156 159 HOH HOH . G 3 HOH B 57 4157 93 HOH HOH . G 3 HOH B 58 4158 200 HOH HOH . G 3 HOH B 59 4159 98 HOH HOH . G 3 HOH B 60 4160 263 HOH HOH . G 3 HOH B 61 4161 41 HOH HOH . G 3 HOH B 62 4162 124 HOH HOH . G 3 HOH B 63 4163 70 HOH HOH . G 3 HOH B 64 4164 148 HOH HOH . G 3 HOH B 65 4165 324 HOH HOH . G 3 HOH B 66 4166 343 HOH HOH . G 3 HOH B 67 4167 326 HOH HOH . G 3 HOH B 68 4168 101 HOH HOH . G 3 HOH B 69 4169 294 HOH HOH . G 3 HOH B 70 4170 125 HOH HOH . G 3 HOH B 71 4171 132 HOH HOH . G 3 HOH B 72 4172 115 HOH HOH . G 3 HOH B 73 4173 299 HOH HOH . G 3 HOH B 74 4174 27 HOH HOH . G 3 HOH B 75 4175 127 HOH HOH . G 3 HOH B 76 4176 336 HOH HOH . G 3 HOH B 77 4177 311 HOH HOH . G 3 HOH B 78 4178 295 HOH HOH . G 3 HOH B 79 4179 61 HOH HOH . G 3 HOH B 80 4180 47 HOH HOH . G 3 HOH B 81 4181 354 HOH HOH . G 3 HOH B 82 4182 104 HOH HOH . G 3 HOH B 83 4183 323 HOH HOH . G 3 HOH B 84 4184 351 HOH HOH . G 3 HOH B 85 4185 259 HOH HOH . G 3 HOH B 86 4186 320 HOH HOH . G 3 HOH B 87 4187 358 HOH HOH . G 3 HOH B 88 4188 353 HOH HOH . G 3 HOH B 89 4189 312 HOH HOH . G 3 HOH B 90 4190 145 HOH HOH . G 3 HOH B 91 4191 316 HOH HOH . G 3 HOH B 92 4192 347 HOH HOH . G 3 HOH B 93 4193 345 HOH HOH . G 3 HOH B 94 4194 149 HOH HOH . G 3 HOH B 95 4195 130 HOH HOH . G 3 HOH B 96 4196 362 HOH HOH . G 3 HOH B 97 4197 128 HOH HOH . G 3 HOH B 98 4198 280 HOH HOH . G 3 HOH B 99 4199 139 HOH HOH . G 3 HOH B 100 4200 154 HOH HOH . G 3 HOH B 101 4201 355 HOH HOH . G 3 HOH B 102 4202 133 HOH HOH . G 3 HOH B 103 4203 151 HOH HOH . G 3 HOH B 104 4204 217 HOH HOH . G 3 HOH B 105 4205 346 HOH HOH . G 3 HOH B 106 4206 106 HOH HOH . G 3 HOH B 107 4207 277 HOH HOH . G 3 HOH B 108 4208 333 HOH HOH . G 3 HOH B 109 4209 334 HOH HOH . G 3 HOH B 110 4210 134 HOH HOH . G 3 HOH B 111 4211 298 HOH HOH . G 3 HOH B 112 4212 118 HOH HOH . G 3 HOH B 113 4213 285 HOH HOH . G 3 HOH B 114 4214 218 HOH HOH . G 3 HOH B 115 4215 184 HOH HOH . G 3 HOH B 116 4216 221 HOH HOH . G 3 HOH B 117 4217 329 HOH HOH . G 3 HOH B 118 4218 157 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 -3.614 -0.856 8.873 1 22.38 ? S SO4 4001 B 1 HETATM 2 O O1 SO4 . . . D 2 -3.13 -2.246 8.448 1 26.66 ? O1 SO4 4001 B 1 HETATM 3 O O2 SO4 . . . D 2 -4.052 -0.135 7.553 1 23.16 ? O2 SO4 4001 B 1 HETATM 4 O O3 SO4 . . . D 2 -4.731 -0.866 9.808 1 21.49 ? O3 SO4 4001 B 1 HETATM 5 O O4 SO4 . . . D 2 -2.542 -0.144 9.711 1 21.17 ? O4 SO4 4001 B 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 5 #