data_5XXH # _model_server_result.job_id '_X2-9P5JB6Hs5tqbPCKe9g' _model_server_result.datetime_utc '2024-12-18 20:42:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5xxh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1203}' # _entry.id 5XXH # _exptl.entry_id 5XXH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5XXH _cell.length_a 44.32 _cell.length_b 44.32 _cell.length_c 121.292 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5XXH _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D MG MG . A MG 1203 1_555 E O HOH . A HOH 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc2 D MG MG . A MG 1203 1_555 E O HOH . A HOH 1346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc3 D MG MG . A MG 1203 1_555 E O HOH . A HOH 1364 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc4 D MG MG . A MG 1203 1_555 E O HOH . A HOH 1380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc5 D MG MG . A MG 1203 1_555 E O HOH . A HOH 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc6 D MG MG . A MG 1203 1_555 E O HOH . A HOH 1421 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5XXH _atom_sites.fract_transf_matrix[1][1] 0.022563 _atom_sites.fract_transf_matrix[1][2] 0.013027 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026054 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008245 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 E0D A 1 1201 1201 E0D E0D . C 3 EDO A 1 1202 1202 EDO EDO . D 4 MG A 1 1203 1203 MG MG . E 5 HOH A 1 1301 1301 HOH HOH . E 5 HOH A 2 1302 1302 HOH HOH . E 5 HOH A 3 1303 1303 HOH HOH . E 5 HOH A 4 1304 1304 HOH HOH . E 5 HOH A 5 1305 1305 HOH HOH . E 5 HOH A 6 1306 1306 HOH HOH . E 5 HOH A 7 1307 1307 HOH HOH . E 5 HOH A 8 1308 1308 HOH HOH . E 5 HOH A 9 1309 1309 HOH HOH . E 5 HOH A 10 1310 1310 HOH HOH . E 5 HOH A 11 1311 1311 HOH HOH . E 5 HOH A 12 1312 1312 HOH HOH . E 5 HOH A 13 1313 1313 HOH HOH . E 5 HOH A 14 1314 1314 HOH HOH . E 5 HOH A 15 1315 1315 HOH HOH . E 5 HOH A 16 1316 1316 HOH HOH . E 5 HOH A 17 1317 1317 HOH HOH . E 5 HOH A 18 1318 1318 HOH HOH . E 5 HOH A 19 1319 1319 HOH HOH . E 5 HOH A 20 1320 1320 HOH HOH . E 5 HOH A 21 1321 1321 HOH HOH . E 5 HOH A 22 1322 1334 HOH HOH . E 5 HOH A 23 1323 1322 HOH HOH . E 5 HOH A 24 1324 1323 HOH HOH . E 5 HOH A 25 1325 1324 HOH HOH . E 5 HOH A 26 1326 1325 HOH HOH . E 5 HOH A 27 1327 1326 HOH HOH . E 5 HOH A 28 1328 1327 HOH HOH . E 5 HOH A 29 1329 1328 HOH HOH . E 5 HOH A 30 1330 1329 HOH HOH . E 5 HOH A 31 1331 1330 HOH HOH . E 5 HOH A 32 1332 1331 HOH HOH . E 5 HOH A 33 1333 1332 HOH HOH . E 5 HOH A 34 1334 1333 HOH HOH . E 5 HOH A 35 1335 1335 HOH HOH . E 5 HOH A 36 1336 1336 HOH HOH . E 5 HOH A 37 1337 1337 HOH HOH . E 5 HOH A 38 1338 1338 HOH HOH . E 5 HOH A 39 1339 1339 HOH HOH . E 5 HOH A 40 1340 1340 HOH HOH . E 5 HOH A 41 1341 1341 HOH HOH . E 5 HOH A 42 1342 1342 HOH HOH . E 5 HOH A 43 1343 1343 HOH HOH . E 5 HOH A 44 1344 1344 HOH HOH . E 5 HOH A 45 1345 1345 HOH HOH . E 5 HOH A 46 1346 1346 HOH HOH . E 5 HOH A 47 1347 1347 HOH HOH . E 5 HOH A 48 1348 1348 HOH HOH . E 5 HOH A 49 1349 1349 HOH HOH . E 5 HOH A 50 1350 1350 HOH HOH . E 5 HOH A 51 1351 1351 HOH HOH . E 5 HOH A 52 1352 1352 HOH HOH . E 5 HOH A 53 1353 1353 HOH HOH . E 5 HOH A 54 1354 1354 HOH HOH . E 5 HOH A 55 1355 1355 HOH HOH . E 5 HOH A 56 1356 1356 HOH HOH . E 5 HOH A 57 1357 1357 HOH HOH . E 5 HOH A 58 1358 1358 HOH HOH . E 5 HOH A 59 1359 1359 HOH HOH . E 5 HOH A 60 1360 1360 HOH HOH . E 5 HOH A 61 1361 1361 HOH HOH . E 5 HOH A 62 1362 1362 HOH HOH . E 5 HOH A 63 1363 1363 HOH HOH . E 5 HOH A 64 1364 1364 HOH HOH . E 5 HOH A 65 1365 1365 HOH HOH . E 5 HOH A 66 1366 1366 HOH HOH . E 5 HOH A 67 1367 1367 HOH HOH . E 5 HOH A 68 1368 1368 HOH HOH . E 5 HOH A 69 1369 1369 HOH HOH . E 5 HOH A 70 1370 1370 HOH HOH . E 5 HOH A 71 1371 1371 HOH HOH . E 5 HOH A 72 1372 1372 HOH HOH . E 5 HOH A 73 1373 1373 HOH HOH . E 5 HOH A 74 1374 1374 HOH HOH . E 5 HOH A 75 1375 1375 HOH HOH . E 5 HOH A 76 1376 1376 HOH HOH . E 5 HOH A 77 1377 1377 HOH HOH . E 5 HOH A 78 1378 1378 HOH HOH . E 5 HOH A 79 1379 1379 HOH HOH . E 5 HOH A 80 1380 1380 HOH HOH . E 5 HOH A 81 1381 1381 HOH HOH . E 5 HOH A 82 1382 1382 HOH HOH . E 5 HOH A 83 1383 1383 HOH HOH . E 5 HOH A 84 1384 1384 HOH HOH . E 5 HOH A 85 1385 1385 HOH HOH . E 5 HOH A 86 1386 1386 HOH HOH . E 5 HOH A 87 1387 1387 HOH HOH . E 5 HOH A 88 1388 1388 HOH HOH . E 5 HOH A 89 1389 1389 HOH HOH . E 5 HOH A 90 1390 1390 HOH HOH . E 5 HOH A 91 1391 1391 HOH HOH . E 5 HOH A 92 1392 1392 HOH HOH . E 5 HOH A 93 1393 1393 HOH HOH . E 5 HOH A 94 1394 1394 HOH HOH . E 5 HOH A 95 1395 1395 HOH HOH . E 5 HOH A 96 1396 1396 HOH HOH . E 5 HOH A 97 1397 1397 HOH HOH . E 5 HOH A 98 1398 1398 HOH HOH . E 5 HOH A 99 1399 1399 HOH HOH . E 5 HOH A 100 1400 1400 HOH HOH . E 5 HOH A 101 1401 1401 HOH HOH . E 5 HOH A 102 1402 1402 HOH HOH . E 5 HOH A 103 1403 1403 HOH HOH . E 5 HOH A 104 1404 1404 HOH HOH . E 5 HOH A 105 1405 1405 HOH HOH . E 5 HOH A 106 1406 1406 HOH HOH . E 5 HOH A 107 1407 1407 HOH HOH . E 5 HOH A 108 1408 1408 HOH HOH . E 5 HOH A 109 1409 1409 HOH HOH . E 5 HOH A 110 1410 1410 HOH HOH . E 5 HOH A 111 1411 1411 HOH HOH . E 5 HOH A 112 1412 1412 HOH HOH . E 5 HOH A 113 1413 1413 HOH HOH . E 5 HOH A 114 1414 1414 HOH HOH . E 5 HOH A 115 1415 1415 HOH HOH . E 5 HOH A 116 1416 1416 HOH HOH . E 5 HOH A 117 1417 1417 HOH HOH . E 5 HOH A 118 1418 1418 HOH HOH . E 5 HOH A 119 1419 1419 HOH HOH . E 5 HOH A 120 1420 1420 HOH HOH . E 5 HOH A 121 1421 1421 HOH HOH . E 5 HOH A 122 1422 1422 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 14.236 _atom_site.Cartn_y 7.062 _atom_site.Cartn_z 11.253 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.47 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1203 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 56 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 507 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #