data_5Y0X # _model_server_result.job_id 51VWlBSeWj1iNF2t5YtNpQ _model_server_result.datetime_utc '2025-09-08 13:00:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5y0x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 5Y0X # _exptl.entry_id 5Y0X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 375.371 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-fluoranyl-3-[(4-methoxynaphthalen-1-yl)sulfonylamino]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Y0X _cell.length_a 32.737 _cell.length_b 53.994 _cell.length_c 75.497 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y0X _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H14 F N O5 S' _chem_comp.formula_weight 375.371 _chem_comp.id 8JR _chem_comp.mon_nstd_flag . _chem_comp.name '2-fluoranyl-3-[(4-methoxynaphthalen-1-yl)sulfonylamino]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 C23 8JR sing 1 n y C24 C25 8JR doub 2 n y C23 C22 8JR doub 3 n y C25 C26 8JR sing 4 n y C22 C21 8JR sing 5 n y C26 C21 8JR sing 6 n y C26 C03 8JR doub 7 n y C21 C06 8JR doub 8 n y O08 S07 8JR doub 9 n n O02 C03 8JR sing 10 n n O02 C01 8JR sing 11 n n C03 C04 8JR sing 12 n y C06 S07 8JR sing 13 n n C06 C05 8JR sing 14 n y S07 O09 8JR doub 15 n n S07 N10 8JR sing 16 n n C04 C05 8JR doub 17 n y C12 C13 8JR doub 18 n y C12 C11 8JR sing 19 n y N10 C11 8JR sing 20 n n C13 C14 8JR sing 21 n y C11 C19 8JR doub 22 n y C14 C15 8JR doub 23 n y C19 C15 8JR sing 24 n y C19 F20 8JR sing 25 n n C15 C16 8JR sing 26 n n C16 O18 8JR doub 27 n n C16 O17 8JR sing 28 n n C13 H1 8JR sing 29 n n C22 H2 8JR sing 30 n n C24 H3 8JR sing 31 n n C01 H4 8JR sing 32 n n C01 H5 8JR sing 33 n n C01 H6 8JR sing 34 n n C04 H7 8JR sing 35 n n C05 H8 8JR sing 36 n n C12 H9 8JR sing 37 n n C14 H10 8JR sing 38 n n C23 H11 8JR sing 39 n n C25 H12 8JR sing 40 n n N10 H13 8JR sing 41 n n O17 H14 8JR sing 42 n n # _atom_sites.entry_id 5Y0X _atom_sites.fract_transf_matrix[1][1] 0.030546 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018521 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013246 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8JR A 1 200 200 8JR LIG . C 3 HOH A 1 301 518 HOH HOH . C 3 HOH A 2 302 490 HOH HOH . C 3 HOH A 3 303 462 HOH HOH . C 3 HOH A 4 304 475 HOH HOH . C 3 HOH A 5 305 502 HOH HOH . C 3 HOH A 6 306 450 HOH HOH . C 3 HOH A 7 307 493 HOH HOH . C 3 HOH A 8 308 452 HOH HOH . C 3 HOH A 9 309 451 HOH HOH . C 3 HOH A 10 310 404 HOH HOH . C 3 HOH A 11 311 486 HOH HOH . C 3 HOH A 12 312 442 HOH HOH . C 3 HOH A 13 313 409 HOH HOH . C 3 HOH A 14 314 443 HOH HOH . C 3 HOH A 15 315 454 HOH HOH . C 3 HOH A 16 316 473 HOH HOH . C 3 HOH A 17 317 492 HOH HOH . C 3 HOH A 18 318 437 HOH HOH . C 3 HOH A 19 319 414 HOH HOH . C 3 HOH A 20 320 426 HOH HOH . C 3 HOH A 21 321 455 HOH HOH . C 3 HOH A 22 322 456 HOH HOH . C 3 HOH A 23 323 474 HOH HOH . C 3 HOH A 24 324 420 HOH HOH . C 3 HOH A 25 325 457 HOH HOH . C 3 HOH A 26 326 410 HOH HOH . C 3 HOH A 27 327 407 HOH HOH . C 3 HOH A 28 328 466 HOH HOH . C 3 HOH A 29 329 408 HOH HOH . C 3 HOH A 30 330 412 HOH HOH . C 3 HOH A 31 331 417 HOH HOH . C 3 HOH A 32 332 415 HOH HOH . C 3 HOH A 33 333 469 HOH HOH . C 3 HOH A 34 334 441 HOH HOH . C 3 HOH A 35 335 480 HOH HOH . C 3 HOH A 36 336 428 HOH HOH . C 3 HOH A 37 337 507 HOH HOH . C 3 HOH A 38 338 485 HOH HOH . C 3 HOH A 39 339 458 HOH HOH . C 3 HOH A 40 340 461 HOH HOH . C 3 HOH A 41 341 483 HOH HOH . C 3 HOH A 42 342 496 HOH HOH . C 3 HOH A 43 343 470 HOH HOH . C 3 HOH A 44 344 440 HOH HOH . C 3 HOH A 45 345 418 HOH HOH . C 3 HOH A 46 346 481 HOH HOH . C 3 HOH A 47 347 460 HOH HOH . C 3 HOH A 48 348 403 HOH HOH . C 3 HOH A 49 349 434 HOH HOH . C 3 HOH A 50 350 405 HOH HOH . C 3 HOH A 51 351 487 HOH HOH . C 3 HOH A 52 352 406 HOH HOH . C 3 HOH A 53 353 402 HOH HOH . C 3 HOH A 54 354 424 HOH HOH . C 3 HOH A 55 355 495 HOH HOH . C 3 HOH A 56 356 413 HOH HOH . C 3 HOH A 57 357 464 HOH HOH . C 3 HOH A 58 358 421 HOH HOH . C 3 HOH A 59 359 430 HOH HOH . C 3 HOH A 60 360 435 HOH HOH . C 3 HOH A 61 361 423 HOH HOH . C 3 HOH A 62 362 439 HOH HOH . C 3 HOH A 63 363 445 HOH HOH . C 3 HOH A 64 364 453 HOH HOH . C 3 HOH A 65 365 504 HOH HOH . C 3 HOH A 66 366 468 HOH HOH . C 3 HOH A 67 367 429 HOH HOH . C 3 HOH A 68 368 431 HOH HOH . C 3 HOH A 69 369 484 HOH HOH . C 3 HOH A 70 370 465 HOH HOH . C 3 HOH A 71 371 401 HOH HOH . C 3 HOH A 72 372 422 HOH HOH . C 3 HOH A 73 373 411 HOH HOH . C 3 HOH A 74 374 416 HOH HOH . C 3 HOH A 75 375 433 HOH HOH . C 3 HOH A 76 376 448 HOH HOH . C 3 HOH A 77 377 436 HOH HOH . C 3 HOH A 78 378 446 HOH HOH . C 3 HOH A 79 379 447 HOH HOH . C 3 HOH A 80 380 471 HOH HOH . C 3 HOH A 81 381 427 HOH HOH . C 3 HOH A 82 382 444 HOH HOH . C 3 HOH A 83 383 438 HOH HOH . C 3 HOH A 84 384 463 HOH HOH . C 3 HOH A 85 385 477 HOH HOH . C 3 HOH A 86 386 459 HOH HOH . C 3 HOH A 87 387 512 HOH HOH . C 3 HOH A 88 388 432 HOH HOH . C 3 HOH A 89 389 476 HOH HOH . C 3 HOH A 90 390 517 HOH HOH . C 3 HOH A 91 391 499 HOH HOH . C 3 HOH A 92 392 482 HOH HOH . C 3 HOH A 93 393 419 HOH HOH . C 3 HOH A 94 394 425 HOH HOH . C 3 HOH A 95 395 498 HOH HOH . C 3 HOH A 96 396 472 HOH HOH . C 3 HOH A 97 397 479 HOH HOH . C 3 HOH A 98 398 516 HOH HOH . C 3 HOH A 99 399 506 HOH HOH . C 3 HOH A 100 400 503 HOH HOH . C 3 HOH A 101 401 449 HOH HOH . C 3 HOH A 102 402 488 HOH HOH . C 3 HOH A 103 403 505 HOH HOH . C 3 HOH A 104 404 467 HOH HOH . C 3 HOH A 105 405 513 HOH HOH . C 3 HOH A 106 406 491 HOH HOH . C 3 HOH A 107 407 494 HOH HOH . C 3 HOH A 108 408 508 HOH HOH . C 3 HOH A 109 409 489 HOH HOH . C 3 HOH A 110 410 478 HOH HOH . C 3 HOH A 111 411 514 HOH HOH . C 3 HOH A 112 412 501 HOH HOH . C 3 HOH A 113 413 500 HOH HOH . C 3 HOH A 114 414 497 HOH HOH . C 3 HOH A 115 415 515 HOH HOH . C 3 HOH A 116 416 510 HOH HOH . C 3 HOH A 117 417 509 HOH HOH . C 3 HOH A 118 418 511 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 8JR . . . B 2 -8.188 5.954 -18.445 0.79 27.75 ? C13 8JR 200 A 1 HETATM 2 C C15 8JR . . . B 2 -7.142 6.567 -16.407 0.79 20.46 ? C15 8JR 200 A 1 HETATM 3 C C21 8JR . . . B 2 -5.315 7.569 -21.257 0.79 17.32 ? C21 8JR 200 A 1 HETATM 4 C C22 8JR . . . B 2 -6.218 7.955 -22.257 0.79 15.64 ? C22 8JR 200 A 1 HETATM 5 C C24 8JR . . . B 2 -5.553 6.062 -23.596 0.79 17.35 ? C24 8JR 200 A 1 HETATM 6 C C26 8JR . . . B 2 -4.542 6.43 -21.434 0.79 16.07 ? C26 8JR 200 A 1 HETATM 7 C C01 8JR . . . B 2 -2.38 4.325 -19.392 0.79 19.07 ? C01 8JR 200 A 1 HETATM 8 C C03 8JR . . . B 2 -3.646 6.036 -20.446 0.79 17.32 ? C03 8JR 200 A 1 HETATM 9 C C04 8JR . . . B 2 -3.52 6.786 -19.267 0.79 18.18 ? C04 8JR 200 A 1 HETATM 10 C C05 8JR . . . B 2 -4.282 7.908 -19.087 0.79 18.55 ? C05 8JR 200 A 1 HETATM 11 C C06 8JR . . . B 2 -5.18 8.31 -20.071 0.79 16.67 ? C06 8JR 200 A 1 HETATM 12 C C11 8JR . . . B 2 -7.57 8.211 -18.082 0.79 23.23 ? C11 8JR 200 A 1 HETATM 13 C C12 8JR . . . B 2 -8.128 7.251 -18.9 0.79 23.53 ? C12 8JR 200 A 1 HETATM 14 C C14 8JR . . . B 2 -7.707 5.613 -17.202 0.79 27.48 ? C14 8JR 200 A 1 HETATM 15 C C16 8JR . . . B 2 -6.634 6.121 -15.066 0.79 23.89 ? C16 8JR 200 A 1 HETATM 16 C C19 8JR . . . B 2 -7.069 7.893 -16.852 0.79 26.32 ? C19 8JR 200 A 1 HETATM 17 C C23 8JR . . . B 2 -6.346 7.22 -23.415 0.79 15.69 ? C23 8JR 200 A 1 HETATM 18 C C25 8JR . . . B 2 -4.664 5.671 -22.619 0.79 16.89 ? C25 8JR 200 A 1 HETATM 19 F F20 8JR . . . B 2 -6.505 8.888 -16.074 0.79 32.29 ? F20 8JR 200 A 1 HETATM 20 N N10 8JR . . . B 2 -7.488 9.548 -18.582 0.79 25.79 ? N10 8JR 200 A 1 HETATM 21 O O02 8JR . . . B 2 -2.862 4.882 -20.603 0.79 17.67 ? O02 8JR 200 A 1 HETATM 22 O O08 8JR . . . B 2 -6.604 10.516 -20.917 0.79 24.34 ? O08 8JR 200 A 1 HETATM 23 O O09 8JR . . . B 2 -5.199 10.774 -19.156 0.79 23.88 ? O09 8JR 200 A 1 HETATM 24 O O17 8JR . . . B 2 -6.609 6.923 -14.109 0.79 30.47 ? O17 8JR 200 A 1 HETATM 25 O O18 8JR . . . B 2 -6.252 4.899 -14.937 0.79 20.7 -1 O18 8JR 200 A 1 HETATM 26 S S07 8JR . . . B 2 -6.126 9.812 -19.718 0.79 20.92 ? S07 8JR 200 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #