data_5Y2F # _model_server_result.job_id imsW0Sd6ztZe2eHF_GFEyg _model_server_result.datetime_utc '2024-11-18 21:39:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5y2f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":402}' # _entry.id 5Y2F # _exptl.entry_id 5Y2F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 612.273 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '5-[[3,5-bis(chloranyl)phenyl]sulfonylamino]-2-[(5-bromanyl-4-fluoranyl-2-methyl-phenyl)sulfamoyl]benzoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Y2F _cell.length_a 162.422 _cell.length_b 162.422 _cell.length_c 162.422 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y2F _symmetry.cell_setting ? _symmetry.Int_Tables_number 213 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 139 A CYS 139 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc2 A SG CYS 142 A CYS 142 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc3 A SG CYS 164 A CYS 164 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc4 A SG CYS 175 A CYS 175 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? covale ? covale1 B NZ LYS 5 C LYS 5 1_555 R C1 HDR . C HDR 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? # _chem_comp.formula 'C20 H14 Br Cl2 F N2 O6 S2' _chem_comp.formula_weight 612.273 _chem_comp.id 8L9 _chem_comp.mon_nstd_flag . _chem_comp.name '5-[[3,5-bis(chloranyl)phenyl]sulfonylamino]-2-[(5-bromanyl-4-fluoranyl-2-methyl-phenyl)sulfamoyl]benzoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5Y2F _atom_sites.fract_transf_matrix[1][1] 0.006157 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006157 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 AR6 A 1 401 1 AR6 AR6 . D 4 8L9 A 1 402 1 8L9 318 . E 5 ZN A 1 403 1 ZN ZN . F 6 GOL A 1 404 1 GOL GOL . G 6 GOL A 1 405 2 GOL GOL . H 6 GOL A 1 406 3 GOL GOL . I 6 GOL A 1 407 4 GOL GOL . J 6 GOL A 1 408 5 GOL GOL . K 7 SO4 A 1 409 6 SO4 SO4 . L 7 SO4 A 1 410 7 SO4 SO4 . M 7 SO4 A 1 411 8 SO4 SO4 . N 7 SO4 A 1 412 10 SO4 SO4 . O 7 SO4 A 1 413 11 SO4 SO4 . P 7 SO4 A 1 414 12 SO4 SO4 . Q 8 PEG A 1 415 13 PEG PEG . R 9 HDR C 1 101 1 HDR MYR . S 7 SO4 C 1 102 9 SO4 SO4 . T 10 HOH A 1 501 1 HOH HOH . T 10 HOH A 2 502 87 HOH HOH . T 10 HOH A 3 503 108 HOH HOH . T 10 HOH A 4 504 4 HOH HOH . T 10 HOH A 5 505 25 HOH HOH . T 10 HOH A 6 506 98 HOH HOH . T 10 HOH A 7 507 9 HOH HOH . T 10 HOH A 8 508 68 HOH HOH . T 10 HOH A 9 509 91 HOH HOH . T 10 HOH A 10 510 47 HOH HOH . T 10 HOH A 11 511 28 HOH HOH . T 10 HOH A 12 512 3 HOH HOH . T 10 HOH A 13 513 73 HOH HOH . T 10 HOH A 14 514 115 HOH HOH . T 10 HOH A 15 515 8 HOH HOH . T 10 HOH A 16 516 33 HOH HOH . T 10 HOH A 17 517 6 HOH HOH . T 10 HOH A 18 518 74 HOH HOH . T 10 HOH A 19 519 66 HOH HOH . T 10 HOH A 20 520 30 HOH HOH . T 10 HOH A 21 521 75 HOH HOH . T 10 HOH A 22 522 43 HOH HOH . T 10 HOH A 23 523 76 HOH HOH . T 10 HOH A 24 524 45 HOH HOH . T 10 HOH A 25 525 80 HOH HOH . T 10 HOH A 26 526 50 HOH HOH . T 10 HOH A 27 527 67 HOH HOH . T 10 HOH A 28 528 11 HOH HOH . T 10 HOH A 29 529 5 HOH HOH . T 10 HOH A 30 530 22 HOH HOH . T 10 HOH A 31 531 34 HOH HOH . T 10 HOH A 32 532 127 HOH HOH . T 10 HOH A 33 533 71 HOH HOH . T 10 HOH A 34 534 53 HOH HOH . T 10 HOH A 35 535 100 HOH HOH . T 10 HOH A 36 536 37 HOH HOH . T 10 HOH A 37 537 62 HOH HOH . T 10 HOH A 38 538 26 HOH HOH . T 10 HOH A 39 539 113 HOH HOH . T 10 HOH A 40 540 58 HOH HOH . T 10 HOH A 41 541 17 HOH HOH . T 10 HOH A 42 542 70 HOH HOH . T 10 HOH A 43 543 104 HOH HOH . T 10 HOH A 44 544 51 HOH HOH . T 10 HOH A 45 545 49 HOH HOH . T 10 HOH A 46 546 112 HOH HOH . T 10 HOH A 47 547 134 HOH HOH . T 10 HOH A 48 548 39 HOH HOH . T 10 HOH A 49 549 10 HOH HOH . T 10 HOH A 50 550 97 HOH HOH . T 10 HOH A 51 551 96 HOH HOH . T 10 HOH A 52 552 122 HOH HOH . T 10 HOH A 53 553 31 HOH HOH . T 10 HOH A 54 554 12 HOH HOH . T 10 HOH A 55 555 52 HOH HOH . T 10 HOH A 56 556 72 HOH HOH . T 10 HOH A 57 557 21 HOH HOH . T 10 HOH A 58 558 55 HOH HOH . T 10 HOH A 59 559 23 HOH HOH . T 10 HOH A 60 560 84 HOH HOH . T 10 HOH A 61 561 105 HOH HOH . T 10 HOH A 62 562 142 HOH HOH . T 10 HOH A 63 563 110 HOH HOH . T 10 HOH A 64 564 24 HOH HOH . T 10 HOH A 65 565 7 HOH HOH . T 10 HOH A 66 566 36 HOH HOH . T 10 HOH A 67 567 65 HOH HOH . T 10 HOH A 68 568 42 HOH HOH . T 10 HOH A 69 569 16 HOH HOH . T 10 HOH A 70 570 102 HOH HOH . T 10 HOH A 71 571 114 HOH HOH . T 10 HOH A 72 572 77 HOH HOH . T 10 HOH A 73 573 20 HOH HOH . T 10 HOH A 74 574 35 HOH HOH . T 10 HOH A 75 575 83 HOH HOH . T 10 HOH A 76 576 2 HOH HOH . T 10 HOH A 77 577 40 HOH HOH . T 10 HOH A 78 578 41 HOH HOH . T 10 HOH A 79 579 90 HOH HOH . T 10 HOH A 80 580 29 HOH HOH . T 10 HOH A 81 581 128 HOH HOH . T 10 HOH A 82 582 94 HOH HOH . T 10 HOH A 83 583 32 HOH HOH . T 10 HOH A 84 584 116 HOH HOH . T 10 HOH A 85 585 109 HOH HOH . T 10 HOH A 86 586 54 HOH HOH . T 10 HOH A 87 587 99 HOH HOH . T 10 HOH A 88 588 56 HOH HOH . T 10 HOH A 89 589 93 HOH HOH . T 10 HOH A 90 590 135 HOH HOH . T 10 HOH A 91 591 46 HOH HOH . T 10 HOH A 92 592 48 HOH HOH . T 10 HOH A 93 593 89 HOH HOH . T 10 HOH A 94 594 27 HOH HOH . T 10 HOH A 95 595 61 HOH HOH . T 10 HOH A 96 596 19 HOH HOH . T 10 HOH A 97 597 59 HOH HOH . T 10 HOH A 98 598 13 HOH HOH . T 10 HOH A 99 599 78 HOH HOH . T 10 HOH A 100 600 44 HOH HOH . T 10 HOH A 101 601 92 HOH HOH . T 10 HOH A 102 602 38 HOH HOH . T 10 HOH A 103 603 138 HOH HOH . T 10 HOH A 104 604 81 HOH HOH . T 10 HOH A 105 605 119 HOH HOH . T 10 HOH A 106 606 60 HOH HOH . T 10 HOH A 107 607 143 HOH HOH . T 10 HOH A 108 608 15 HOH HOH . T 10 HOH A 109 609 82 HOH HOH . T 10 HOH A 110 610 117 HOH HOH . T 10 HOH A 111 611 129 HOH HOH . T 10 HOH A 112 612 85 HOH HOH . T 10 HOH A 113 613 137 HOH HOH . T 10 HOH A 114 614 145 HOH HOH . T 10 HOH A 115 615 64 HOH HOH . T 10 HOH A 116 616 111 HOH HOH . T 10 HOH A 117 617 101 HOH HOH . T 10 HOH A 118 618 139 HOH HOH . T 10 HOH A 119 619 144 HOH HOH . T 10 HOH A 120 620 103 HOH HOH . T 10 HOH A 121 621 63 HOH HOH . T 10 HOH A 122 622 69 HOH HOH . T 10 HOH A 123 623 106 HOH HOH . T 10 HOH A 124 624 57 HOH HOH . T 10 HOH A 125 625 88 HOH HOH . U 10 HOH C 1 201 107 HOH HOH . U 10 HOH C 2 202 124 HOH HOH . U 10 HOH C 3 203 125 HOH HOH . U 10 HOH C 4 204 95 HOH HOH . U 10 HOH C 5 205 136 HOH HOH . U 10 HOH C 6 206 14 HOH HOH . U 10 HOH C 7 207 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C17 8L9 . . . D 4 -2.359 126.821 157.854 1 143.11 ? C17 8L9 402 A 1 HETATM 2 C C18 8L9 . . . D 4 -1.295 126.663 158.738 1 131.17 ? C18 8L9 402 A 1 HETATM 3 C C20 8L9 . . . D 4 -0.597 125.448 158.791 1 137.97 ? C20 8L9 402 A 1 HETATM 4 C C22 8L9 . . . D 4 -0.951 124.359 157.961 1 148.14 ? C22 8L9 402 A 1 HETATM 5 C C23 8L9 . . . D 4 -2.022 124.508 157.049 1 144.07 ? C23 8L9 402 A 1 HETATM 6 C C24 8L9 . . . D 4 -2.708 125.74 157.013 1 148.47 ? C24 8L9 402 A 1 HETATM 7 C C26 8L9 . . . D 4 -2.516 123.472 156.107 1 129.3 ? C26 8L9 402 A 1 HETATM 8 C C01 8L9 . . . D 4 -5.956 129.455 153.653 1 168.54 ? C01 8L9 402 A 1 HETATM 9 C C03 8L9 . . . D 4 -6.688 129.928 154.748 1 171.44 ? C03 8L9 402 A 1 HETATM 10 C C04 8L9 . . . D 4 -6.333 129.538 156.049 1 177.59 ? C04 8L9 402 A 1 HETATM 11 C C06 8L9 . . . D 4 -5.236 128.679 156.232 1 173.9 ? C06 8L9 402 A 1 HETATM 12 C C07 8L9 . . . D 4 -4.504 128.208 155.128 1 167.94 ? C07 8L9 402 A 1 HETATM 13 C C09 8L9 . . . D 4 -4.872 128.6 153.843 1 164.42 ? C09 8L9 402 A 1 HETATM 14 CL CL1 8L9 . . . D 4 -3.988 128.032 152.474 1 154.98 ? CL1 8L9 402 A 1 HETATM 15 CL CL2 8L9 . . . D 4 -8.021 130.988 154.465 1 158.37 ? CL2 8L9 402 A 1 HETATM 16 S S12 8L9 . . . D 4 -4.788 128.179 157.875 1 182.64 ? S12 8L9 402 A 1 HETATM 17 N N13 8L9 . . . D 4 -3.089 128.06 157.775 1 154.41 ? N13 8L9 402 A 1 HETATM 18 O O15 8L9 . . . D 4 -5.385 126.873 158.088 1 187.24 ? O15 8L9 402 A 1 HETATM 19 O O16 8L9 . . . D 4 -5.14 129.264 158.774 1 190.18 ? O16 8L9 402 A 1 HETATM 20 O O27 8L9 . . . D 4 -3.4 122.647 156.731 1 107.81 -1 O27 8L9 402 A 1 HETATM 21 O O29 8L9 . . . D 4 -2.175 123.389 154.94 1 119.9 ? O29 8L9 402 A 1 HETATM 22 S S30 8L9 . . . D 4 0.004 122.857 158.063 1 153.2 ? S30 8L9 402 A 1 HETATM 23 O O31 8L9 . . . D 4 0.262 122.571 156.673 1 148.98 ? O31 8L9 402 A 1 HETATM 24 O O32 8L9 . . . D 4 1.164 123.103 158.885 1 143.1 ? O32 8L9 402 A 1 HETATM 25 N N33 8L9 . . . D 4 -0.966 121.624 158.791 1 168.01 ? N33 8L9 402 A 1 HETATM 26 C C35 8L9 . . . D 4 -1.157 121.512 160.222 1 179.41 ? C35 8L9 402 A 1 HETATM 27 C C36 8L9 . . . D 4 -2.074 122.394 160.817 1 188.76 ? C36 8L9 402 A 1 HETATM 28 C C38 8L9 . . . D 4 -2.309 122.342 162.197 1 197.99 ? C38 8L9 402 A 1 HETATM 29 C C39 8L9 . . . D 4 -1.644 121.414 163.006 1 189.61 ? C39 8L9 402 A 1 HETATM 30 C C40 8L9 . . . D 4 -0.734 120.527 162.432 1 184.33 ? C40 8L9 402 A 1 HETATM 31 C C42 8L9 . . . D 4 -0.48 120.557 161.043 1 180.71 ? C42 8L9 402 A 1 HETATM 32 C C43 8L9 . . . D 4 0.511 119.571 160.513 1 171.48 ? C43 8L9 402 A 1 HETATM 33 F F1 8L9 . . . D 4 -1.856 121.352 164.333 1 162.18 ? F1 8L9 402 A 1 HETATM 34 BR BR1 8L9 . . . D 4 -3.552 123.546 162.938 1 238.57 ? BR1 8L9 402 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 545 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 34 #