data_5Y2U # _model_server_result.job_id qzPSW3J_IRLZSC5Rdum3hg _model_server_result.datetime_utc '2024-10-14 19:13:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5y2u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 5Y2U # _exptl.entry_id 5Y2U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Y2U _cell.length_a 82.64 _cell.length_b 85.267 _cell.length_c 102.466 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y2U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 250 n n O1 C6 MES sing 251 n n C2 C3 MES sing 252 n n C2 H21 MES sing 253 n n C2 H22 MES sing 254 n n C3 N4 MES sing 255 n n C3 H31 MES sing 256 n n C3 H32 MES sing 257 n n N4 C5 MES sing 258 n n N4 C7 MES sing 259 n n N4 HN4 MES sing 260 n n C5 C6 MES sing 261 n n C5 H51 MES sing 262 n n C5 H52 MES sing 263 n n C6 H61 MES sing 264 n n C6 H62 MES sing 265 n n C7 C8 MES sing 266 n n C7 H71 MES sing 267 n n C7 H72 MES sing 268 n n C8 S MES sing 269 n n C8 H81 MES sing 270 n n C8 H82 MES sing 271 n n S O1S MES doub 272 n n S O2S MES doub 273 n n S O3S MES sing 274 n n # _atom_sites.entry_id 5Y2U _atom_sites.fract_transf_matrix[1][1] 0.012101 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011728 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009759 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL B 1 301 301 CL CL . D 3 AZN B 1 302 1 AZN DRG . E 3 AZN C 1 301 1 AZN DRG . F 4 MES C 1 302 303 MES MES . G 5 HOH B 1 401 303 HOH HOH . G 5 HOH B 2 402 183 HOH HOH . G 5 HOH B 3 403 7 HOH HOH . G 5 HOH B 4 404 153 HOH HOH . G 5 HOH B 5 405 277 HOH HOH . G 5 HOH B 6 406 101 HOH HOH . G 5 HOH B 7 407 313 HOH HOH . G 5 HOH B 8 408 278 HOH HOH . G 5 HOH B 9 409 143 HOH HOH . G 5 HOH B 10 410 3 HOH HOH . G 5 HOH B 11 411 115 HOH HOH . G 5 HOH B 12 412 83 HOH HOH . G 5 HOH B 13 413 23 HOH HOH . G 5 HOH B 14 414 250 HOH HOH . G 5 HOH B 15 415 259 HOH HOH . G 5 HOH B 16 416 76 HOH HOH . G 5 HOH B 17 417 156 HOH HOH . G 5 HOH B 18 418 129 HOH HOH . G 5 HOH B 19 419 46 HOH HOH . G 5 HOH B 20 420 119 HOH HOH . G 5 HOH B 21 421 22 HOH HOH . G 5 HOH B 22 422 43 HOH HOH . G 5 HOH B 23 423 93 HOH HOH . G 5 HOH B 24 424 165 HOH HOH . G 5 HOH B 25 425 14 HOH HOH . G 5 HOH B 26 426 38 HOH HOH . G 5 HOH B 27 427 8 HOH HOH . G 5 HOH B 28 428 62 HOH HOH . G 5 HOH B 29 429 68 HOH HOH . G 5 HOH B 30 430 112 HOH HOH . G 5 HOH B 31 431 17 HOH HOH . G 5 HOH B 32 432 1 HOH HOH . G 5 HOH B 33 433 44 HOH HOH . G 5 HOH B 34 434 51 HOH HOH . G 5 HOH B 35 435 11 HOH HOH . G 5 HOH B 36 436 48 HOH HOH . G 5 HOH B 37 437 110 HOH HOH . G 5 HOH B 38 438 12 HOH HOH . G 5 HOH B 39 439 139 HOH HOH . G 5 HOH B 40 440 84 HOH HOH . G 5 HOH B 41 441 32 HOH HOH . G 5 HOH B 42 442 162 HOH HOH . G 5 HOH B 43 443 52 HOH HOH . G 5 HOH B 44 444 16 HOH HOH . G 5 HOH B 45 445 141 HOH HOH . G 5 HOH B 46 446 134 HOH HOH . G 5 HOH B 47 447 98 HOH HOH . G 5 HOH B 48 448 2 HOH HOH . G 5 HOH B 49 449 34 HOH HOH . G 5 HOH B 50 450 45 HOH HOH . G 5 HOH B 51 451 107 HOH HOH . G 5 HOH B 52 452 37 HOH HOH . G 5 HOH B 53 453 184 HOH HOH . G 5 HOH B 54 454 61 HOH HOH . G 5 HOH B 55 455 40 HOH HOH . G 5 HOH B 56 456 29 HOH HOH . G 5 HOH B 57 457 205 HOH HOH . G 5 HOH B 58 458 164 HOH HOH . G 5 HOH B 59 459 137 HOH HOH . G 5 HOH B 60 460 257 HOH HOH . G 5 HOH B 61 461 73 HOH HOH . G 5 HOH B 62 462 272 HOH HOH . G 5 HOH B 63 463 72 HOH HOH . G 5 HOH B 64 464 28 HOH HOH . G 5 HOH B 65 465 41 HOH HOH . G 5 HOH B 66 466 88 HOH HOH . G 5 HOH B 67 467 275 HOH HOH . G 5 HOH B 68 468 87 HOH HOH . G 5 HOH B 69 469 149 HOH HOH . G 5 HOH B 70 470 86 HOH HOH . G 5 HOH B 71 471 269 HOH HOH . G 5 HOH B 72 472 135 HOH HOH . G 5 HOH B 73 473 167 HOH HOH . G 5 HOH B 74 474 302 HOH HOH . G 5 HOH B 75 475 42 HOH HOH . G 5 HOH B 76 476 270 HOH HOH . G 5 HOH B 77 477 114 HOH HOH . G 5 HOH B 78 478 96 HOH HOH . G 5 HOH B 79 479 35 HOH HOH . G 5 HOH B 80 480 30 HOH HOH . G 5 HOH B 81 481 69 HOH HOH . G 5 HOH B 82 482 145 HOH HOH . G 5 HOH B 83 483 31 HOH HOH . G 5 HOH B 84 484 161 HOH HOH . G 5 HOH B 85 485 193 HOH HOH . G 5 HOH B 86 486 26 HOH HOH . G 5 HOH B 87 487 113 HOH HOH . G 5 HOH B 88 488 301 HOH HOH . G 5 HOH B 89 489 59 HOH HOH . G 5 HOH B 90 490 123 HOH HOH . G 5 HOH B 91 491 15 HOH HOH . G 5 HOH B 92 492 136 HOH HOH . G 5 HOH B 93 493 246 HOH HOH . G 5 HOH B 94 494 271 HOH HOH . G 5 HOH B 95 495 57 HOH HOH . G 5 HOH B 96 496 54 HOH HOH . G 5 HOH B 97 497 118 HOH HOH . G 5 HOH B 98 498 127 HOH HOH . G 5 HOH B 99 499 310 HOH HOH . G 5 HOH B 100 500 197 HOH HOH . G 5 HOH B 101 501 181 HOH HOH . G 5 HOH B 102 502 60 HOH HOH . G 5 HOH B 103 503 187 HOH HOH . G 5 HOH B 104 504 144 HOH HOH . G 5 HOH B 105 505 185 HOH HOH . G 5 HOH B 106 506 221 HOH HOH . G 5 HOH B 107 507 142 HOH HOH . G 5 HOH B 108 508 254 HOH HOH . G 5 HOH B 109 509 202 HOH HOH . G 5 HOH B 110 510 109 HOH HOH . G 5 HOH B 111 511 66 HOH HOH . G 5 HOH B 112 512 133 HOH HOH . G 5 HOH B 113 513 267 HOH HOH . G 5 HOH B 114 514 314 HOH HOH . G 5 HOH B 115 515 190 HOH HOH . G 5 HOH B 116 516 163 HOH HOH . H 5 HOH C 1 401 36 HOH HOH . H 5 HOH C 2 402 20 HOH HOH . H 5 HOH C 3 403 148 HOH HOH . H 5 HOH C 4 404 9 HOH HOH . H 5 HOH C 5 405 5 HOH HOH . H 5 HOH C 6 406 125 HOH HOH . H 5 HOH C 7 407 4 HOH HOH . H 5 HOH C 8 408 18 HOH HOH . H 5 HOH C 9 409 47 HOH HOH . H 5 HOH C 10 410 56 HOH HOH . H 5 HOH C 11 411 50 HOH HOH . H 5 HOH C 12 412 111 HOH HOH . H 5 HOH C 13 413 65 HOH HOH . H 5 HOH C 14 414 146 HOH HOH . H 5 HOH C 15 415 178 HOH HOH . H 5 HOH C 16 416 299 HOH HOH . H 5 HOH C 17 417 85 HOH HOH . H 5 HOH C 18 418 132 HOH HOH . H 5 HOH C 19 419 94 HOH HOH . H 5 HOH C 20 420 77 HOH HOH . H 5 HOH C 21 421 130 HOH HOH . H 5 HOH C 22 422 81 HOH HOH . H 5 HOH C 23 423 173 HOH HOH . H 5 HOH C 24 424 159 HOH HOH . H 5 HOH C 25 425 55 HOH HOH . H 5 HOH C 26 426 128 HOH HOH . H 5 HOH C 27 427 244 HOH HOH . H 5 HOH C 28 428 25 HOH HOH . H 5 HOH C 29 429 89 HOH HOH . H 5 HOH C 30 430 100 HOH HOH . H 5 HOH C 31 431 312 HOH HOH . H 5 HOH C 32 432 281 HOH HOH . H 5 HOH C 33 433 10 HOH HOH . H 5 HOH C 34 434 63 HOH HOH . H 5 HOH C 35 435 27 HOH HOH . H 5 HOH C 36 436 78 HOH HOH . H 5 HOH C 37 437 6 HOH HOH . H 5 HOH C 38 438 82 HOH HOH . H 5 HOH C 39 439 95 HOH HOH . H 5 HOH C 40 440 19 HOH HOH . H 5 HOH C 41 441 122 HOH HOH . H 5 HOH C 42 442 102 HOH HOH . H 5 HOH C 43 443 105 HOH HOH . H 5 HOH C 44 444 245 HOH HOH . H 5 HOH C 45 445 74 HOH HOH . H 5 HOH C 46 446 71 HOH HOH . H 5 HOH C 47 447 39 HOH HOH . H 5 HOH C 48 448 276 HOH HOH . H 5 HOH C 49 449 147 HOH HOH . H 5 HOH C 50 450 242 HOH HOH . H 5 HOH C 51 451 140 HOH HOH . H 5 HOH C 52 452 21 HOH HOH . H 5 HOH C 53 453 273 HOH HOH . H 5 HOH C 54 454 237 HOH HOH . H 5 HOH C 55 455 126 HOH HOH . H 5 HOH C 56 456 243 HOH HOH . H 5 HOH C 57 457 157 HOH HOH . H 5 HOH C 58 458 92 HOH HOH . H 5 HOH C 59 459 151 HOH HOH . H 5 HOH C 60 460 124 HOH HOH . H 5 HOH C 61 461 80 HOH HOH . H 5 HOH C 62 462 251 HOH HOH . H 5 HOH C 63 463 117 HOH HOH . H 5 HOH C 64 464 120 HOH HOH . H 5 HOH C 65 465 91 HOH HOH . H 5 HOH C 66 466 108 HOH HOH . H 5 HOH C 67 467 103 HOH HOH . H 5 HOH C 68 468 58 HOH HOH . H 5 HOH C 69 469 256 HOH HOH . H 5 HOH C 70 470 53 HOH HOH . H 5 HOH C 71 471 192 HOH HOH . H 5 HOH C 72 472 182 HOH HOH . H 5 HOH C 73 473 33 HOH HOH . H 5 HOH C 74 474 104 HOH HOH . H 5 HOH C 75 475 24 HOH HOH . H 5 HOH C 76 476 174 HOH HOH . H 5 HOH C 77 477 211 HOH HOH . H 5 HOH C 78 478 198 HOH HOH . H 5 HOH C 79 479 170 HOH HOH . H 5 HOH C 80 480 64 HOH HOH . H 5 HOH C 81 481 67 HOH HOH . H 5 HOH C 82 482 160 HOH HOH . H 5 HOH C 83 483 225 HOH HOH . H 5 HOH C 84 484 168 HOH HOH . H 5 HOH C 85 485 99 HOH HOH . H 5 HOH C 86 486 224 HOH HOH . H 5 HOH C 87 487 171 HOH HOH . H 5 HOH C 88 488 212 HOH HOH . H 5 HOH C 89 489 97 HOH HOH . H 5 HOH C 90 490 175 HOH HOH . H 5 HOH C 91 491 203 HOH HOH . H 5 HOH C 92 492 121 HOH HOH . H 5 HOH C 93 493 208 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . F 4 18.137 -9.077 -22.399 1 68.38 ? O1 MES 302 C 1 HETATM 2 C C2 MES . . . F 4 17.315 -10.201 -22.74 1 62.35 ? C2 MES 302 C 1 HETATM 3 C C3 MES . . . F 4 15.824 -9.864 -22.795 1 56.88 ? C3 MES 302 C 1 HETATM 4 N N4 MES . . . F 4 15.73 -8.599 -23.519 1 57.12 ? N4 MES 302 C 1 HETATM 5 C C5 MES . . . F 4 16.492 -7.438 -23.056 1 63.11 ? C5 MES 302 C 1 HETATM 6 C C6 MES . . . F 4 17.432 -7.917 -21.954 1 63.34 ? C6 MES 302 C 1 HETATM 7 C C7 MES . . . F 4 14.524 -8.321 -24.297 1 53.94 ? C7 MES 302 C 1 HETATM 8 C C8 MES . . . F 4 14.147 -9.657 -24.914 1 49.1 ? C8 MES 302 C 1 HETATM 9 S S MES . . . F 4 12.656 -9.595 -25.637 1 44.78 ? S MES 302 C 1 HETATM 10 O O1S MES . . . F 4 11.914 -8.328 -25.436 1 44.38 ? O1S MES 302 C 1 HETATM 11 O O2S MES . . . F 4 12.824 -9.85 -27.084 1 38.3 ? O2S MES 302 C 1 HETATM 12 O O3S MES . . . F 4 11.887 -10.693 -24.997 1 47.25 ? O3S MES 302 C 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 591 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 12 #