data_5Y4R # _model_server_result.job_id wkU2fKGjbg0SY55r4IuPEw _model_server_result.datetime_utc '2025-02-26 09:06:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5y4r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":305}' # _entry.id 5Y4R # _exptl.entry_id 5Y4R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Y4R _cell.length_a 88.521 _cell.length_b 98.927 _cell.length_c 110.646 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y4R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,U,V 1 1 C,D,L,M,N,O,P,Q,R,S,T,W,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N ? 3 Q N N ? 3 R N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 366 n n S O2 SO4 doub 367 n n S O3 SO4 sing 368 n n S O4 SO4 sing 369 n n # _atom_sites.entry_id 5Y4R _atom_sites.fract_transf_matrix[1][1] 0.011297 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010108 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009038 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 301 1 SO4 SO4 . F 3 SO4 A 1 302 2 SO4 SO4 . G 3 SO4 A 1 303 6 SO4 SO4 . H 3 SO4 A 1 304 9 SO4 SO4 . I 3 SO4 A 1 305 11 SO4 SO4 . J 4 C2E D 1 201 9 C2E C2E . K 4 C2E D 1 202 10 C2E C2E . L 3 SO4 B 1 301 3 SO4 SO4 . M 3 SO4 B 1 302 4 SO4 SO4 . N 3 SO4 B 1 303 5 SO4 SO4 . O 3 SO4 B 1 304 7 SO4 SO4 . P 3 SO4 B 1 305 8 SO4 SO4 . Q 3 SO4 B 1 306 10 SO4 SO4 . R 3 SO4 B 1 307 12 SO4 SO4 . S 4 C2E C 1 201 8 C2E C2E . T 4 C2E C 1 202 11 C2E C2E . U 5 HOH A 1 401 152 HOH HOH . U 5 HOH A 2 402 113 HOH HOH . U 5 HOH A 3 403 107 HOH HOH . U 5 HOH A 4 404 145 HOH HOH . U 5 HOH A 5 405 21 HOH HOH . U 5 HOH A 6 406 155 HOH HOH . U 5 HOH A 7 407 120 HOH HOH . U 5 HOH A 8 408 10 HOH HOH . U 5 HOH A 9 409 35 HOH HOH . U 5 HOH A 10 410 103 HOH HOH . U 5 HOH A 11 411 129 HOH HOH . U 5 HOH A 12 412 81 HOH HOH . U 5 HOH A 13 413 91 HOH HOH . U 5 HOH A 14 414 78 HOH HOH . U 5 HOH A 15 415 141 HOH HOH . U 5 HOH A 16 416 52 HOH HOH . U 5 HOH A 17 417 2 HOH HOH . U 5 HOH A 18 418 19 HOH HOH . U 5 HOH A 19 419 16 HOH HOH . U 5 HOH A 20 420 102 HOH HOH . U 5 HOH A 21 421 137 HOH HOH . U 5 HOH A 22 422 28 HOH HOH . U 5 HOH A 23 423 65 HOH HOH . U 5 HOH A 24 424 125 HOH HOH . U 5 HOH A 25 425 146 HOH HOH . U 5 HOH A 26 426 26 HOH HOH . U 5 HOH A 27 427 22 HOH HOH . U 5 HOH A 28 428 32 HOH HOH . U 5 HOH A 29 429 15 HOH HOH . U 5 HOH A 30 430 79 HOH HOH . U 5 HOH A 31 431 34 HOH HOH . U 5 HOH A 32 432 66 HOH HOH . U 5 HOH A 33 433 53 HOH HOH . U 5 HOH A 34 434 12 HOH HOH . U 5 HOH A 35 435 153 HOH HOH . U 5 HOH A 36 436 75 HOH HOH . U 5 HOH A 37 437 88 HOH HOH . U 5 HOH A 38 438 62 HOH HOH . U 5 HOH A 39 439 87 HOH HOH . U 5 HOH A 40 440 164 HOH HOH . U 5 HOH A 41 441 119 HOH HOH . U 5 HOH A 42 442 4 HOH HOH . U 5 HOH A 43 443 14 HOH HOH . U 5 HOH A 44 444 116 HOH HOH . U 5 HOH A 45 445 151 HOH HOH . U 5 HOH A 46 446 7 HOH HOH . U 5 HOH A 47 447 31 HOH HOH . U 5 HOH A 48 448 55 HOH HOH . U 5 HOH A 49 449 45 HOH HOH . U 5 HOH A 50 450 99 HOH HOH . U 5 HOH A 51 451 90 HOH HOH . U 5 HOH A 52 452 38 HOH HOH . U 5 HOH A 53 453 111 HOH HOH . U 5 HOH A 54 454 89 HOH HOH . U 5 HOH A 55 455 118 HOH HOH . U 5 HOH A 56 456 84 HOH HOH . U 5 HOH A 57 457 165 HOH HOH . U 5 HOH A 58 458 172 HOH HOH . U 5 HOH A 59 459 82 HOH HOH . U 5 HOH A 60 460 69 HOH HOH . U 5 HOH A 61 461 161 HOH HOH . U 5 HOH A 62 462 11 HOH HOH . U 5 HOH A 63 463 95 HOH HOH . U 5 HOH A 64 464 115 HOH HOH . U 5 HOH A 65 465 166 HOH HOH . V 5 HOH D 1 301 29 HOH HOH . V 5 HOH D 2 302 96 HOH HOH . V 5 HOH D 3 303 169 HOH HOH . V 5 HOH D 4 304 142 HOH HOH . V 5 HOH D 5 305 179 HOH HOH . V 5 HOH D 6 306 70 HOH HOH . V 5 HOH D 7 307 3 HOH HOH . V 5 HOH D 8 308 5 HOH HOH . V 5 HOH D 9 309 154 HOH HOH . V 5 HOH D 10 310 121 HOH HOH . V 5 HOH D 11 311 80 HOH HOH . V 5 HOH D 12 312 9 HOH HOH . V 5 HOH D 13 313 85 HOH HOH . V 5 HOH D 14 314 156 HOH HOH . V 5 HOH D 15 315 42 HOH HOH . V 5 HOH D 16 316 131 HOH HOH . V 5 HOH D 17 317 71 HOH HOH . V 5 HOH D 18 318 68 HOH HOH . V 5 HOH D 19 319 144 HOH HOH . V 5 HOH D 20 320 158 HOH HOH . V 5 HOH D 21 321 83 HOH HOH . V 5 HOH D 22 322 106 HOH HOH . V 5 HOH D 23 323 124 HOH HOH . V 5 HOH D 24 324 105 HOH HOH . V 5 HOH D 25 325 143 HOH HOH . V 5 HOH D 26 326 157 HOH HOH . V 5 HOH D 27 327 171 HOH HOH . V 5 HOH D 28 328 132 HOH HOH . V 5 HOH D 29 329 174 HOH HOH . V 5 HOH D 30 330 177 HOH HOH . V 5 HOH D 31 331 130 HOH HOH . W 5 HOH B 1 401 159 HOH HOH . W 5 HOH B 2 402 100 HOH HOH . W 5 HOH B 3 403 8 HOH HOH . W 5 HOH B 4 404 178 HOH HOH . W 5 HOH B 5 405 60 HOH HOH . W 5 HOH B 6 406 54 HOH HOH . W 5 HOH B 7 407 17 HOH HOH . W 5 HOH B 8 408 41 HOH HOH . W 5 HOH B 9 409 123 HOH HOH . W 5 HOH B 10 410 30 HOH HOH . W 5 HOH B 11 411 175 HOH HOH . W 5 HOH B 12 412 37 HOH HOH . W 5 HOH B 13 413 25 HOH HOH . W 5 HOH B 14 414 92 HOH HOH . W 5 HOH B 15 415 149 HOH HOH . W 5 HOH B 16 416 168 HOH HOH . W 5 HOH B 17 417 20 HOH HOH . W 5 HOH B 18 418 61 HOH HOH . W 5 HOH B 19 419 57 HOH HOH . W 5 HOH B 20 420 109 HOH HOH . W 5 HOH B 21 421 73 HOH HOH . W 5 HOH B 22 422 67 HOH HOH . W 5 HOH B 23 423 176 HOH HOH . W 5 HOH B 24 424 18 HOH HOH . W 5 HOH B 25 425 43 HOH HOH . W 5 HOH B 26 426 47 HOH HOH . W 5 HOH B 27 427 46 HOH HOH . W 5 HOH B 28 428 59 HOH HOH . W 5 HOH B 29 429 44 HOH HOH . W 5 HOH B 30 430 98 HOH HOH . W 5 HOH B 31 431 39 HOH HOH . W 5 HOH B 32 432 48 HOH HOH . W 5 HOH B 33 433 27 HOH HOH . W 5 HOH B 34 434 24 HOH HOH . W 5 HOH B 35 435 114 HOH HOH . W 5 HOH B 36 436 112 HOH HOH . W 5 HOH B 37 437 93 HOH HOH . W 5 HOH B 38 438 56 HOH HOH . W 5 HOH B 39 439 148 HOH HOH . W 5 HOH B 40 440 50 HOH HOH . W 5 HOH B 41 441 163 HOH HOH . W 5 HOH B 42 442 135 HOH HOH . W 5 HOH B 43 443 117 HOH HOH . W 5 HOH B 44 444 36 HOH HOH . W 5 HOH B 45 445 126 HOH HOH . W 5 HOH B 46 446 122 HOH HOH . W 5 HOH B 47 447 33 HOH HOH . W 5 HOH B 48 448 58 HOH HOH . W 5 HOH B 49 449 74 HOH HOH . W 5 HOH B 50 450 77 HOH HOH . W 5 HOH B 51 451 170 HOH HOH . W 5 HOH B 52 452 133 HOH HOH . W 5 HOH B 53 453 167 HOH HOH . X 5 HOH C 1 301 150 HOH HOH . X 5 HOH C 2 302 134 HOH HOH . X 5 HOH C 3 303 86 HOH HOH . X 5 HOH C 4 304 160 HOH HOH . X 5 HOH C 5 305 6 HOH HOH . X 5 HOH C 6 306 1 HOH HOH . X 5 HOH C 7 307 101 HOH HOH . X 5 HOH C 8 308 104 HOH HOH . X 5 HOH C 9 309 13 HOH HOH . X 5 HOH C 10 310 94 HOH HOH . X 5 HOH C 11 311 64 HOH HOH . X 5 HOH C 12 312 23 HOH HOH . X 5 HOH C 13 313 147 HOH HOH . X 5 HOH C 14 314 40 HOH HOH . X 5 HOH C 15 315 139 HOH HOH . X 5 HOH C 16 316 173 HOH HOH . X 5 HOH C 17 317 138 HOH HOH . X 5 HOH C 18 318 49 HOH HOH . X 5 HOH C 19 319 63 HOH HOH . X 5 HOH C 20 320 110 HOH HOH . X 5 HOH C 21 321 136 HOH HOH . X 5 HOH C 22 322 51 HOH HOH . X 5 HOH C 23 323 108 HOH HOH . X 5 HOH C 24 324 140 HOH HOH . X 5 HOH C 25 325 97 HOH HOH . X 5 HOH C 26 326 76 HOH HOH . X 5 HOH C 27 327 128 HOH HOH . X 5 HOH C 28 328 127 HOH HOH . X 5 HOH C 29 329 72 HOH HOH . X 5 HOH C 30 330 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . P 3 20.878 -7.379 -36.217 1 100.25 ? S SO4 305 B 1 HETATM 2 O O1 SO4 . . . P 3 21.801 -6.472 -36.904 1 97.92 ? O1 SO4 305 B 1 HETATM 3 O O2 SO4 . . . P 3 19.631 -7.462 -36.979 1 98.1 ? O2 SO4 305 B 1 HETATM 4 O O3 SO4 . . . P 3 20.593 -6.858 -34.873 1 97.72 ? O3 SO4 305 B 1 HETATM 5 O O4 SO4 . . . P 3 21.481 -8.711 -36.132 1 90.79 ? O4 SO4 305 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 222 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #