data_5Y5N
#
_model_server_result.job_id            cVlZf96W-JFmoLp7iM96CA 
_model_server_result.datetime_utc      '2024-11-27 01:20:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5y5n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1001}' 
#
_entry.id    5Y5N 
#
_exptl.entry_id    5Y5N 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5Y5N 
_cell.length_a            50.85 
_cell.length_b            57.98 
_cell.length_c            124.532 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5Y5N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 164 A CYS 195 1_555 B ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc2 A SG CYS 169 A CYS 200 1_555 B ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? 
metalc ? metalc3 A SG CYS 190 A CYS 221 1_555 B ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? 
metalc ? metalc4 A SG CYS 193 A CYS 224 1_555 B ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5Y5N 
_atom_sites.fract_transf_matrix[1][1]    0.019666 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017247 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00803 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 1001 1001 ZN ZN . 
C 3 8NO A 1 1002 1 8NO 387 . 
D 4 HOH A 1 1101 131 HOH HOH . 
D 4 HOH A 2 1102 13 HOH HOH . 
D 4 HOH A 3 1103 29 HOH HOH . 
D 4 HOH A 4 1104 56 HOH HOH . 
D 4 HOH A 5 1105 59 HOH HOH . 
D 4 HOH A 6 1106 115 HOH HOH . 
D 4 HOH A 7 1107 77 HOH HOH . 
D 4 HOH A 8 1108 1 HOH HOH . 
D 4 HOH A 9 1109 69 HOH HOH . 
D 4 HOH A 10 1110 130 HOH HOH . 
D 4 HOH A 11 1111 76 HOH HOH . 
D 4 HOH A 12 1112 4 HOH HOH . 
D 4 HOH A 13 1113 40 HOH HOH . 
D 4 HOH A 14 1114 27 HOH HOH . 
D 4 HOH A 15 1115 44 HOH HOH . 
D 4 HOH A 16 1116 37 HOH HOH . 
D 4 HOH A 17 1117 31 HOH HOH . 
D 4 HOH A 18 1118 10 HOH HOH . 
D 4 HOH A 19 1119 11 HOH HOH . 
D 4 HOH A 20 1120 78 HOH HOH . 
D 4 HOH A 21 1121 45 HOH HOH . 
D 4 HOH A 22 1122 94 HOH HOH . 
D 4 HOH A 23 1123 17 HOH HOH . 
D 4 HOH A 24 1124 58 HOH HOH . 
D 4 HOH A 25 1125 14 HOH HOH . 
D 4 HOH A 26 1126 80 HOH HOH . 
D 4 HOH A 27 1127 114 HOH HOH . 
D 4 HOH A 28 1128 19 HOH HOH . 
D 4 HOH A 29 1129 3 HOH HOH . 
D 4 HOH A 30 1130 39 HOH HOH . 
D 4 HOH A 31 1131 83 HOH HOH . 
D 4 HOH A 32 1132 23 HOH HOH . 
D 4 HOH A 33 1133 36 HOH HOH . 
D 4 HOH A 34 1134 8 HOH HOH . 
D 4 HOH A 35 1135 50 HOH HOH . 
D 4 HOH A 36 1136 34 HOH HOH . 
D 4 HOH A 37 1137 88 HOH HOH . 
D 4 HOH A 38 1138 84 HOH HOH . 
D 4 HOH A 39 1139 49 HOH HOH . 
D 4 HOH A 40 1140 67 HOH HOH . 
D 4 HOH A 41 1141 22 HOH HOH . 
D 4 HOH A 42 1142 25 HOH HOH . 
D 4 HOH A 43 1143 7 HOH HOH . 
D 4 HOH A 44 1144 86 HOH HOH . 
D 4 HOH A 45 1145 2 HOH HOH . 
D 4 HOH A 46 1146 20 HOH HOH . 
D 4 HOH A 47 1147 118 HOH HOH . 
D 4 HOH A 48 1148 12 HOH HOH . 
D 4 HOH A 49 1149 43 HOH HOH . 
D 4 HOH A 50 1150 60 HOH HOH . 
D 4 HOH A 51 1151 105 HOH HOH . 
D 4 HOH A 52 1152 71 HOH HOH . 
D 4 HOH A 53 1153 9 HOH HOH . 
D 4 HOH A 54 1154 61 HOH HOH . 
D 4 HOH A 55 1155 28 HOH HOH . 
D 4 HOH A 56 1156 5 HOH HOH . 
D 4 HOH A 57 1157 63 HOH HOH . 
D 4 HOH A 58 1158 87 HOH HOH . 
D 4 HOH A 59 1159 30 HOH HOH . 
D 4 HOH A 60 1160 38 HOH HOH . 
D 4 HOH A 61 1161 104 HOH HOH . 
D 4 HOH A 62 1162 26 HOH HOH . 
D 4 HOH A 63 1163 68 HOH HOH . 
D 4 HOH A 64 1164 24 HOH HOH . 
D 4 HOH A 65 1165 64 HOH HOH . 
D 4 HOH A 66 1166 136 HOH HOH . 
D 4 HOH A 67 1167 126 HOH HOH . 
D 4 HOH A 68 1168 48 HOH HOH . 
D 4 HOH A 69 1169 54 HOH HOH . 
D 4 HOH A 70 1170 73 HOH HOH . 
D 4 HOH A 71 1171 47 HOH HOH . 
D 4 HOH A 72 1172 41 HOH HOH . 
D 4 HOH A 73 1173 21 HOH HOH . 
D 4 HOH A 74 1174 46 HOH HOH . 
D 4 HOH A 75 1175 85 HOH HOH . 
D 4 HOH A 76 1176 129 HOH HOH . 
D 4 HOH A 77 1177 42 HOH HOH . 
D 4 HOH A 78 1178 18 HOH HOH . 
D 4 HOH A 79 1179 108 HOH HOH . 
D 4 HOH A 80 1180 128 HOH HOH . 
D 4 HOH A 81 1181 33 HOH HOH . 
D 4 HOH A 82 1182 113 HOH HOH . 
D 4 HOH A 83 1183 66 HOH HOH . 
D 4 HOH A 84 1184 135 HOH HOH . 
D 4 HOH A 85 1185 35 HOH HOH . 
D 4 HOH A 86 1186 101 HOH HOH . 
D 4 HOH A 87 1187 52 HOH HOH . 
D 4 HOH A 88 1188 117 HOH HOH . 
D 4 HOH A 89 1189 120 HOH HOH . 
D 4 HOH A 90 1190 72 HOH HOH . 
D 4 HOH A 91 1191 32 HOH HOH . 
D 4 HOH A 92 1192 97 HOH HOH . 
D 4 HOH A 93 1193 125 HOH HOH . 
D 4 HOH A 94 1194 122 HOH HOH . 
D 4 HOH A 95 1195 16 HOH HOH . 
D 4 HOH A 96 1196 121 HOH HOH . 
D 4 HOH A 97 1197 132 HOH HOH . 
D 4 HOH A 98 1198 134 HOH HOH . 
D 4 HOH A 99 1199 123 HOH HOH . 
D 4 HOH A 100 1200 133 HOH HOH . 
D 4 HOH A 101 1201 124 HOH HOH . 
D 4 HOH A 102 1202 127 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               45.432 
_atom_site.Cartn_y               48.547 
_atom_site.Cartn_z               43 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        47.4 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1001 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           249 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#