data_5Y64 # _model_server_result.job_id wIGT4GYBRcbnLNGYJbhHHw _model_server_result.datetime_utc '2024-11-29 00:38:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5y64 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 5Y64 # _exptl.entry_id 5Y64 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Y64 _cell.length_a 82.527 _cell.length_b 82.736 _cell.length_c 104.361 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y64 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ARG 10 C ARG 10 1_555 B N NEP 11 C NEP 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 B C NEP 11 C NEP 11 1_555 B N GLY 12 C GLY 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5Y64 _atom_sites.fract_transf_matrix[1][1] 0.012117 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012087 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009582 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL B 1 301 1 CL CL . D 4 MES C 1 301 303 MES MES . E 5 8LF C 1 302 1 8LF DRG . F 6 HOH B 1 401 146 HOH HOH . F 6 HOH B 2 402 116 HOH HOH . F 6 HOH B 3 403 2 HOH HOH . F 6 HOH B 4 404 72 HOH HOH . F 6 HOH B 5 405 3 HOH HOH . F 6 HOH B 6 406 42 HOH HOH . F 6 HOH B 7 407 207 HOH HOH . F 6 HOH B 8 408 1 HOH HOH . F 6 HOH B 9 409 75 HOH HOH . F 6 HOH B 10 410 17 HOH HOH . F 6 HOH B 11 411 21 HOH HOH . F 6 HOH B 12 412 73 HOH HOH . F 6 HOH B 13 413 95 HOH HOH . F 6 HOH B 14 414 39 HOH HOH . F 6 HOH B 15 415 83 HOH HOH . F 6 HOH B 16 416 56 HOH HOH . F 6 HOH B 17 417 58 HOH HOH . F 6 HOH B 18 418 10 HOH HOH . F 6 HOH B 19 419 5 HOH HOH . F 6 HOH B 20 420 65 HOH HOH . F 6 HOH B 21 421 15 HOH HOH . F 6 HOH B 22 422 6 HOH HOH . F 6 HOH B 23 423 89 HOH HOH . F 6 HOH B 24 424 43 HOH HOH . F 6 HOH B 25 425 126 HOH HOH . F 6 HOH B 26 426 7 HOH HOH . F 6 HOH B 27 427 48 HOH HOH . F 6 HOH B 28 428 112 HOH HOH . F 6 HOH B 29 429 141 HOH HOH . F 6 HOH B 30 430 25 HOH HOH . F 6 HOH B 31 431 34 HOH HOH . F 6 HOH B 32 432 57 HOH HOH . F 6 HOH B 33 433 27 HOH HOH . F 6 HOH B 34 434 135 HOH HOH . F 6 HOH B 35 435 108 HOH HOH . F 6 HOH B 36 436 130 HOH HOH . F 6 HOH B 37 437 104 HOH HOH . F 6 HOH B 38 438 119 HOH HOH . F 6 HOH B 39 439 88 HOH HOH . F 6 HOH B 40 440 19 HOH HOH . F 6 HOH B 41 441 14 HOH HOH . F 6 HOH B 42 442 28 HOH HOH . F 6 HOH B 43 443 35 HOH HOH . F 6 HOH B 44 444 115 HOH HOH . F 6 HOH B 45 445 190 HOH HOH . F 6 HOH B 46 446 67 HOH HOH . F 6 HOH B 47 447 45 HOH HOH . F 6 HOH B 48 448 93 HOH HOH . F 6 HOH B 49 449 98 HOH HOH . F 6 HOH B 50 450 33 HOH HOH . F 6 HOH B 51 451 118 HOH HOH . F 6 HOH B 52 452 111 HOH HOH . F 6 HOH B 53 453 31 HOH HOH . F 6 HOH B 54 454 30 HOH HOH . F 6 HOH B 55 455 68 HOH HOH . F 6 HOH B 56 456 70 HOH HOH . F 6 HOH B 57 457 46 HOH HOH . F 6 HOH B 58 458 151 HOH HOH . F 6 HOH B 59 459 110 HOH HOH . F 6 HOH B 60 460 22 HOH HOH . F 6 HOH B 61 461 205 HOH HOH . F 6 HOH B 62 462 87 HOH HOH . F 6 HOH B 63 463 131 HOH HOH . F 6 HOH B 64 464 12 HOH HOH . F 6 HOH B 65 465 138 HOH HOH . F 6 HOH B 66 466 79 HOH HOH . F 6 HOH B 67 467 185 HOH HOH . F 6 HOH B 68 468 16 HOH HOH . F 6 HOH B 69 469 66 HOH HOH . F 6 HOH B 70 470 175 HOH HOH . F 6 HOH B 71 471 85 HOH HOH . F 6 HOH B 72 472 76 HOH HOH . F 6 HOH B 73 473 74 HOH HOH . F 6 HOH B 74 474 174 HOH HOH . F 6 HOH B 75 475 78 HOH HOH . F 6 HOH B 76 476 107 HOH HOH . F 6 HOH B 77 477 38 HOH HOH . F 6 HOH B 78 478 105 HOH HOH . F 6 HOH B 79 479 71 HOH HOH . F 6 HOH B 80 480 63 HOH HOH . F 6 HOH B 81 481 124 HOH HOH . F 6 HOH B 82 482 101 HOH HOH . F 6 HOH B 83 483 134 HOH HOH . F 6 HOH B 84 484 201 HOH HOH . F 6 HOH B 85 485 208 HOH HOH . F 6 HOH B 86 486 176 HOH HOH . F 6 HOH B 87 487 69 HOH HOH . F 6 HOH B 88 488 202 HOH HOH . G 6 HOH C 1 401 84 HOH HOH . G 6 HOH C 2 402 211 HOH HOH . G 6 HOH C 3 403 51 HOH HOH . G 6 HOH C 4 404 142 HOH HOH . G 6 HOH C 5 405 8 HOH HOH . G 6 HOH C 6 406 199 HOH HOH . G 6 HOH C 7 407 4 HOH HOH . G 6 HOH C 8 408 97 HOH HOH . G 6 HOH C 9 409 18 HOH HOH . G 6 HOH C 10 410 32 HOH HOH . G 6 HOH C 11 411 60 HOH HOH . G 6 HOH C 12 412 121 HOH HOH . G 6 HOH C 13 413 61 HOH HOH . G 6 HOH C 14 414 23 HOH HOH . G 6 HOH C 15 415 189 HOH HOH . G 6 HOH C 16 416 50 HOH HOH . G 6 HOH C 17 417 96 HOH HOH . G 6 HOH C 18 418 29 HOH HOH . G 6 HOH C 19 419 9 HOH HOH . G 6 HOH C 20 420 92 HOH HOH . G 6 HOH C 21 421 11 HOH HOH . G 6 HOH C 22 422 82 HOH HOH . G 6 HOH C 23 423 55 HOH HOH . G 6 HOH C 24 424 54 HOH HOH . G 6 HOH C 25 425 26 HOH HOH . G 6 HOH C 26 426 24 HOH HOH . G 6 HOH C 27 427 132 HOH HOH . G 6 HOH C 28 428 164 HOH HOH . G 6 HOH C 29 429 40 HOH HOH . G 6 HOH C 30 430 49 HOH HOH . G 6 HOH C 31 431 41 HOH HOH . G 6 HOH C 32 432 212 HOH HOH . G 6 HOH C 33 433 178 HOH HOH . G 6 HOH C 34 434 64 HOH HOH . G 6 HOH C 35 435 20 HOH HOH . G 6 HOH C 36 436 114 HOH HOH . G 6 HOH C 37 437 90 HOH HOH . G 6 HOH C 38 438 47 HOH HOH . G 6 HOH C 39 439 113 HOH HOH . G 6 HOH C 40 440 53 HOH HOH . G 6 HOH C 41 441 77 HOH HOH . G 6 HOH C 42 442 59 HOH HOH . G 6 HOH C 43 443 94 HOH HOH . G 6 HOH C 44 444 179 HOH HOH . G 6 HOH C 45 445 13 HOH HOH . G 6 HOH C 46 446 99 HOH HOH . G 6 HOH C 47 447 80 HOH HOH . G 6 HOH C 48 448 133 HOH HOH . G 6 HOH C 49 449 140 HOH HOH . G 6 HOH C 50 450 37 HOH HOH . G 6 HOH C 51 451 165 HOH HOH . G 6 HOH C 52 452 129 HOH HOH . G 6 HOH C 53 453 204 HOH HOH . G 6 HOH C 54 454 91 HOH HOH . G 6 HOH C 55 455 120 HOH HOH . G 6 HOH C 56 456 117 HOH HOH . G 6 HOH C 57 457 144 HOH HOH . G 6 HOH C 58 458 198 HOH HOH . G 6 HOH C 59 459 36 HOH HOH . G 6 HOH C 60 460 200 HOH HOH . G 6 HOH C 61 461 44 HOH HOH . G 6 HOH C 62 462 128 HOH HOH . G 6 HOH C 63 463 106 HOH HOH . G 6 HOH C 64 464 213 HOH HOH . G 6 HOH C 65 465 123 HOH HOH . G 6 HOH C 66 466 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . D 4 17.247 -8.596 -22.502 1 66.85 ? O1 MES 301 C 1 HETATM 2 C C2 MES . . . D 4 16.648 -9.578 -23.359 1 65.98 ? C2 MES 301 C 1 HETATM 3 C C3 MES . . . D 4 15.141 -9.391 -23.554 1 59.81 ? C3 MES 301 C 1 HETATM 4 N N4 MES . . . D 4 14.954 -7.983 -23.881 1 55.68 ? N4 MES 301 C 1 HETATM 5 C C5 MES . . . D 4 15.553 -6.948 -23.046 1 64.05 ? C5 MES 301 C 1 HETATM 6 C C6 MES . . . D 4 16.324 -7.662 -21.935 1 71.04 ? C6 MES 301 C 1 HETATM 7 C C7 MES . . . D 4 13.842 -7.61 -24.744 1 54.38 ? C7 MES 301 C 1 HETATM 8 C C8 MES . . . D 4 14.053 -8.455 -25.994 1 52.08 ? C8 MES 301 C 1 HETATM 9 S S MES . . . D 4 12.642 -9.241 -26.365 1 48.12 ? S MES 301 C 1 HETATM 10 O O1S MES . . . D 4 11.475 -8.368 -26.074 1 47.23 ? O1S MES 301 C 1 HETATM 11 O O2S MES . . . D 4 12.705 -9.629 -27.783 1 46.72 ? O2S MES 301 C 1 HETATM 12 O O3S MES . . . D 4 12.577 -10.491 -25.569 1 52.53 ? O3S MES 301 C 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 12 #