data_5Y7D # _model_server_result.job_id i3n-eHIvxeEcsTKWq6tZNw _model_server_result.datetime_utc '2024-11-05 08:01:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5y7d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":210}' # _entry.id 5Y7D # _exptl.entry_id 5Y7D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Y7D _cell.length_a 49.765 _cell.length_b 49.765 _cell.length_c 175.709 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y7D _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 25 A GLU 24 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc2 A O THR 26 A THR 25 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc3 A OG1 THR 26 A THR 25 1_555 E NA NA . A NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.025 ? metalc ? metalc4 B O2 GOL . A GOL 201 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc5 B O3 GOL . A GOL 201 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? metalc ? metalc6 B O3 GOL . A GOL 201 1_555 E NA NA . A NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? metalc ? metalc7 B O3 GOL . A GOL 201 1_555 F NA NA . A NA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? metalc ? metalc8 D NA NA . A NA 203 1_555 R O HOH . A HOH 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc9 F NA NA . A NA 205 1_555 R O HOH . A HOH 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.773 ? metalc ? metalc10 G NA NA . A NA 206 1_555 R O HOH . A HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.177 ? metalc ? metalc11 G NA NA . A NA 206 1_555 R O HOH . A HOH 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc12 H NA NA . A NA 207 1_555 R O HOH . A HOH 457 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.184 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5Y7D _atom_sites.fract_transf_matrix[1][1] 0.020094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020094 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005691 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 1 GOL GOL . C 2 GOL A 1 202 2 GOL GOL . D 3 NA A 1 203 1 NA NA . E 3 NA A 1 204 2 NA NA . F 3 NA A 1 205 3 NA NA . G 3 NA A 1 206 4 NA NA . H 3 NA A 1 207 5 NA NA . I 4 CL A 1 208 1 CL CL . J 4 CL A 1 209 2 CL CL . K 4 CL A 1 210 3 CL CL . L 4 CL A 1 211 4 CL CL . M 4 CL A 1 212 5 CL CL . N 4 CL A 1 213 6 CL CL . O 4 CL A 1 214 7 CL CL . P 4 CL A 1 215 8 CL CL . Q 4 CL A 1 216 9 CL CL . R 5 HOH A 1 301 96 HOH HOH . R 5 HOH A 2 302 70 HOH HOH . R 5 HOH A 3 303 173 HOH HOH . R 5 HOH A 4 304 89 HOH HOH . R 5 HOH A 5 305 180 HOH HOH . R 5 HOH A 6 306 71 HOH HOH . R 5 HOH A 7 307 135 HOH HOH . R 5 HOH A 8 308 160 HOH HOH . R 5 HOH A 9 309 217 HOH HOH . R 5 HOH A 10 310 42 HOH HOH . R 5 HOH A 11 311 130 HOH HOH . R 5 HOH A 12 312 63 HOH HOH . R 5 HOH A 13 313 44 HOH HOH . R 5 HOH A 14 314 6 HOH HOH . R 5 HOH A 15 315 114 HOH HOH . R 5 HOH A 16 316 75 HOH HOH . R 5 HOH A 17 317 192 HOH HOH . R 5 HOH A 18 318 31 HOH HOH . R 5 HOH A 19 319 58 HOH HOH . R 5 HOH A 20 320 151 HOH HOH . R 5 HOH A 21 321 68 HOH HOH . R 5 HOH A 22 322 107 HOH HOH . R 5 HOH A 23 323 85 HOH HOH . R 5 HOH A 24 324 196 HOH HOH . R 5 HOH A 25 325 5 HOH HOH . R 5 HOH A 26 326 119 HOH HOH . R 5 HOH A 27 327 32 HOH HOH . R 5 HOH A 28 328 64 HOH HOH . R 5 HOH A 29 329 136 HOH HOH . R 5 HOH A 30 330 43 HOH HOH . R 5 HOH A 31 331 34 HOH HOH . R 5 HOH A 32 332 14 HOH HOH . R 5 HOH A 33 333 36 HOH HOH . R 5 HOH A 34 334 18 HOH HOH . R 5 HOH A 35 335 27 HOH HOH . R 5 HOH A 36 336 78 HOH HOH . R 5 HOH A 37 337 59 HOH HOH . R 5 HOH A 38 338 105 HOH HOH . R 5 HOH A 39 339 209 HOH HOH . R 5 HOH A 40 340 128 HOH HOH . R 5 HOH A 41 341 4 HOH HOH . R 5 HOH A 42 342 126 HOH HOH . R 5 HOH A 43 343 45 HOH HOH . R 5 HOH A 44 344 28 HOH HOH . R 5 HOH A 45 345 30 HOH HOH . R 5 HOH A 46 346 207 HOH HOH . R 5 HOH A 47 347 53 HOH HOH . R 5 HOH A 48 348 102 HOH HOH . R 5 HOH A 49 349 152 HOH HOH . R 5 HOH A 50 350 90 HOH HOH . R 5 HOH A 51 351 154 HOH HOH . R 5 HOH A 52 352 153 HOH HOH . R 5 HOH A 53 353 100 HOH HOH . R 5 HOH A 54 354 104 HOH HOH . R 5 HOH A 55 355 60 HOH HOH . R 5 HOH A 56 356 69 HOH HOH . R 5 HOH A 57 357 221 HOH HOH . R 5 HOH A 58 358 1 HOH HOH . R 5 HOH A 59 359 61 HOH HOH . R 5 HOH A 60 360 84 HOH HOH . R 5 HOH A 61 361 29 HOH HOH . R 5 HOH A 62 362 211 HOH HOH . R 5 HOH A 63 363 20 HOH HOH . R 5 HOH A 64 364 120 HOH HOH . R 5 HOH A 65 365 17 HOH HOH . R 5 HOH A 66 366 210 HOH HOH . R 5 HOH A 67 367 26 HOH HOH . R 5 HOH A 68 368 81 HOH HOH . R 5 HOH A 69 369 33 HOH HOH . R 5 HOH A 70 370 2 HOH HOH . R 5 HOH A 71 371 103 HOH HOH . R 5 HOH A 72 372 35 HOH HOH . R 5 HOH A 73 373 80 HOH HOH . R 5 HOH A 74 374 66 HOH HOH . R 5 HOH A 75 375 101 HOH HOH . R 5 HOH A 76 376 122 HOH HOH . R 5 HOH A 77 377 133 HOH HOH . R 5 HOH A 78 378 67 HOH HOH . R 5 HOH A 79 379 108 HOH HOH . R 5 HOH A 80 380 212 HOH HOH . R 5 HOH A 81 381 9 HOH HOH . R 5 HOH A 82 382 91 HOH HOH . R 5 HOH A 83 383 146 HOH HOH . R 5 HOH A 84 384 150 HOH HOH . R 5 HOH A 85 385 11 HOH HOH . R 5 HOH A 86 386 137 HOH HOH . R 5 HOH A 87 387 86 HOH HOH . R 5 HOH A 88 388 8 HOH HOH . R 5 HOH A 89 389 12 HOH HOH . R 5 HOH A 90 390 218 HOH HOH . R 5 HOH A 91 391 141 HOH HOH . R 5 HOH A 92 392 109 HOH HOH . R 5 HOH A 93 393 55 HOH HOH . R 5 HOH A 94 394 142 HOH HOH . R 5 HOH A 95 395 15 HOH HOH . R 5 HOH A 96 396 19 HOH HOH . R 5 HOH A 97 397 113 HOH HOH . R 5 HOH A 98 398 127 HOH HOH . R 5 HOH A 99 399 10 HOH HOH . R 5 HOH A 100 400 24 HOH HOH . R 5 HOH A 101 401 132 HOH HOH . R 5 HOH A 102 402 22 HOH HOH . R 5 HOH A 103 403 117 HOH HOH . R 5 HOH A 104 404 112 HOH HOH . R 5 HOH A 105 405 40 HOH HOH . R 5 HOH A 106 406 16 HOH HOH . R 5 HOH A 107 407 110 HOH HOH . R 5 HOH A 108 408 62 HOH HOH . R 5 HOH A 109 409 195 HOH HOH . R 5 HOH A 110 410 95 HOH HOH . R 5 HOH A 111 411 118 HOH HOH . R 5 HOH A 112 412 77 HOH HOH . R 5 HOH A 113 413 65 HOH HOH . R 5 HOH A 114 414 51 HOH HOH . R 5 HOH A 115 415 46 HOH HOH . R 5 HOH A 116 416 23 HOH HOH . R 5 HOH A 117 417 73 HOH HOH . R 5 HOH A 118 418 37 HOH HOH . R 5 HOH A 119 419 145 HOH HOH . R 5 HOH A 120 420 147 HOH HOH . R 5 HOH A 121 421 41 HOH HOH . R 5 HOH A 122 422 216 HOH HOH . R 5 HOH A 123 423 25 HOH HOH . R 5 HOH A 124 424 87 HOH HOH . R 5 HOH A 125 425 83 HOH HOH . R 5 HOH A 126 426 175 HOH HOH . R 5 HOH A 127 427 106 HOH HOH . R 5 HOH A 128 428 115 HOH HOH . R 5 HOH A 129 429 3 HOH HOH . R 5 HOH A 130 430 125 HOH HOH . R 5 HOH A 131 431 56 HOH HOH . R 5 HOH A 132 432 148 HOH HOH . R 5 HOH A 133 433 7 HOH HOH . R 5 HOH A 134 434 131 HOH HOH . R 5 HOH A 135 435 57 HOH HOH . R 5 HOH A 136 436 92 HOH HOH . R 5 HOH A 137 437 13 HOH HOH . R 5 HOH A 138 438 123 HOH HOH . R 5 HOH A 139 439 143 HOH HOH . R 5 HOH A 140 440 21 HOH HOH . R 5 HOH A 141 441 76 HOH HOH . R 5 HOH A 142 442 72 HOH HOH . R 5 HOH A 143 443 162 HOH HOH . R 5 HOH A 144 444 94 HOH HOH . R 5 HOH A 145 445 171 HOH HOH . R 5 HOH A 146 446 177 HOH HOH . R 5 HOH A 147 447 159 HOH HOH . R 5 HOH A 148 448 172 HOH HOH . R 5 HOH A 149 449 167 HOH HOH . R 5 HOH A 150 450 201 HOH HOH . R 5 HOH A 151 451 52 HOH HOH . R 5 HOH A 152 452 139 HOH HOH . R 5 HOH A 153 453 144 HOH HOH . R 5 HOH A 154 454 214 HOH HOH . R 5 HOH A 155 455 194 HOH HOH . R 5 HOH A 156 456 149 HOH HOH . R 5 HOH A 157 457 121 HOH HOH . R 5 HOH A 158 458 124 HOH HOH . R 5 HOH A 159 459 88 HOH HOH . R 5 HOH A 160 460 129 HOH HOH . R 5 HOH A 161 461 219 HOH HOH . R 5 HOH A 162 462 157 HOH HOH . R 5 HOH A 163 463 155 HOH HOH . R 5 HOH A 164 464 54 HOH HOH . R 5 HOH A 165 465 111 HOH HOH . R 5 HOH A 166 466 99 HOH HOH . R 5 HOH A 167 467 187 HOH HOH . R 5 HOH A 168 468 215 HOH HOH . R 5 HOH A 169 469 205 HOH HOH . R 5 HOH A 170 470 74 HOH HOH . R 5 HOH A 171 471 47 HOH HOH . R 5 HOH A 172 472 166 HOH HOH . R 5 HOH A 173 473 170 HOH HOH . R 5 HOH A 174 474 190 HOH HOH . R 5 HOH A 175 475 50 HOH HOH . R 5 HOH A 176 476 198 HOH HOH . R 5 HOH A 177 477 181 HOH HOH . R 5 HOH A 178 478 79 HOH HOH . R 5 HOH A 179 479 39 HOH HOH . R 5 HOH A 180 480 206 HOH HOH . R 5 HOH A 181 481 208 HOH HOH . R 5 HOH A 182 482 197 HOH HOH . R 5 HOH A 183 483 193 HOH HOH . R 5 HOH A 184 484 168 HOH HOH . R 5 HOH A 185 485 182 HOH HOH . R 5 HOH A 186 486 183 HOH HOH . R 5 HOH A 187 487 204 HOH HOH . R 5 HOH A 188 488 116 HOH HOH . R 5 HOH A 189 489 48 HOH HOH . R 5 HOH A 190 490 98 HOH HOH . R 5 HOH A 191 491 174 HOH HOH . R 5 HOH A 192 492 49 HOH HOH . R 5 HOH A 193 493 82 HOH HOH . R 5 HOH A 194 494 158 HOH HOH . R 5 HOH A 195 495 163 HOH HOH . R 5 HOH A 196 496 165 HOH HOH . R 5 HOH A 197 497 176 HOH HOH . R 5 HOH A 198 498 188 HOH HOH . R 5 HOH A 199 499 138 HOH HOH . R 5 HOH A 200 500 161 HOH HOH . R 5 HOH A 201 501 202 HOH HOH . R 5 HOH A 202 502 38 HOH HOH . R 5 HOH A 203 503 184 HOH HOH . R 5 HOH A 204 504 93 HOH HOH . R 5 HOH A 205 505 134 HOH HOH . R 5 HOH A 206 506 169 HOH HOH . R 5 HOH A 207 507 185 HOH HOH . R 5 HOH A 208 508 186 HOH HOH . R 5 HOH A 209 509 213 HOH HOH . R 5 HOH A 210 510 200 HOH HOH . R 5 HOH A 211 511 220 HOH HOH . R 5 HOH A 212 512 140 HOH HOH . R 5 HOH A 213 513 203 HOH HOH . R 5 HOH A 214 514 191 HOH HOH . R 5 HOH A 215 515 164 HOH HOH . R 5 HOH A 216 516 156 HOH HOH . R 5 HOH A 217 517 189 HOH HOH . R 5 HOH A 218 518 97 HOH HOH . R 5 HOH A 219 519 199 HOH HOH . R 5 HOH A 220 520 178 HOH HOH . R 5 HOH A 221 521 179 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 4 _atom_site.Cartn_x 4.812 _atom_site.Cartn_y -7.081 _atom_site.Cartn_z -2.865 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 210 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #