data_5Y7Z # _model_server_result.job_id HYE65C_abfVYZvBlsyNcfQ _model_server_result.datetime_utc '2024-11-15 14:28:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5y7z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 5Y7Z # _exptl.entry_id 5Y7Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 446.902 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Gefitinib _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Y7Z _cell.length_a 76.353 _cell.length_b 85.513 _cell.length_c 149.042 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y7Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,K,L 1 1 B,C,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 29 D CYS 22 1_555 C SG CYS 103 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 D SG CYS 29 C CYS 22 1_555 D SG CYS 103 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C22 H24 Cl F N4 O3' _chem_comp.formula_weight 446.902 _chem_comp.id IRE _chem_comp.mon_nstd_flag . _chem_comp.name Gefitinib _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAO CAL IRE sing 173 n n CAO NBE IRE sing 174 n n CAO HAO1 IRE sing 175 n n CAO HAO2 IRE sing 176 n n CAL OAU IRE sing 177 n n CAL HAL1 IRE sing 178 n n CAL HAL2 IRE sing 179 n n OAU CAM IRE sing 180 n n CAM CAP IRE sing 181 n n CAM HAM1 IRE sing 182 n n CAM HAM2 IRE sing 183 n n CAP NBE IRE sing 184 n n CAP HAP1 IRE sing 185 n n CAP HAP2 IRE sing 186 n n NBE CAN IRE sing 187 n n CAN CAJ IRE sing 188 n n CAN HAN1 IRE sing 189 n n CAN HAN2 IRE sing 190 n n CAJ CAK IRE sing 191 n n CAJ HAJ1 IRE sing 192 n n CAJ HAJ2 IRE sing 193 n n CAK OAV IRE sing 194 n n CAK HAK1 IRE sing 195 n n CAK HAK2 IRE sing 196 n n OAV CBA IRE sing 197 n n CBA CAZ IRE doub 198 n y CBA CAI IRE sing 199 n y CAZ CAH IRE sing 200 n y CAZ OAT IRE sing 201 n n CAH C4 IRE doub 202 n y CAH HAH IRE sing 203 n n OAT CAA IRE sing 204 n n CAA HAA1 IRE sing 205 n n CAA HAA2 IRE sing 206 n n CAA HAA3 IRE sing 207 n n CAI C5 IRE doub 208 n y CAI HAI IRE sing 209 n n C5 C4 IRE sing 210 n y C5 C6 IRE sing 211 n y C4 N3 IRE sing 212 n y N3 C2 IRE doub 213 n y C2 N1 IRE sing 214 n y C2 H2 IRE sing 215 n n N1 C6 IRE doub 216 n y C6 NAS IRE sing 217 n n NAS CAY IRE sing 218 n n CAY CAG IRE doub 219 n y CAY CAE IRE sing 220 n y CAG CAX IRE sing 221 n y CAG HAG IRE sing 222 n n CAX CL IRE sing 223 n n CAX CAW IRE doub 224 n y CAW FAB IRE sing 225 n n CAW CAD IRE sing 226 n y CAD CAE IRE doub 227 n y CAD HAD IRE sing 228 n n CAE HAE IRE sing 229 n n NAS H1 IRE sing 230 n n # _atom_sites.entry_id 5Y7Z _atom_sites.fract_transf_matrix[1][1] 0.013097 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011694 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00671 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 IRE A 1 401 1 IRE IRE . F 4 SO4 A 1 402 1 SO4 SO4 . G 4 SO4 A 1 403 5 SO4 SO4 . H 3 IRE B 1 401 2 IRE IRE . I 4 SO4 B 1 402 3 SO4 SO4 . J 4 SO4 D 1 201 4 SO4 SO4 . K 4 SO4 C 1 201 2 SO4 SO4 . L 5 HOH A 1 501 1 HOH HOH . L 5 HOH A 2 502 2 HOH HOH . M 5 HOH B 1 501 9 HOH HOH . M 5 HOH B 2 502 10 HOH HOH . M 5 HOH B 3 503 8 HOH HOH . M 5 HOH B 4 504 4 HOH HOH . M 5 HOH B 5 505 11 HOH HOH . M 5 HOH B 6 506 5 HOH HOH . N 5 HOH D 1 301 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAO IRE . . . E 3 10.549 -22.634 16.597 1 50.97 ? CAO IRE 401 A 1 HETATM 2 C CAL IRE . . . E 3 11.31 -21.861 17.661 1 57.84 ? CAL IRE 401 A 1 HETATM 3 O OAU IRE . . . E 3 12.309 -21.061 17.049 1 58.11 ? OAU IRE 401 A 1 HETATM 4 C CAM IRE . . . E 3 11.798 -20.204 16.044 1 53.11 ? CAM IRE 401 A 1 HETATM 5 C CAP IRE . . . E 3 10.961 -20.975 15.02 1 56.27 ? CAP IRE 401 A 1 HETATM 6 N NBE IRE . . . E 3 9.86 -21.619 15.778 1 52.79 ? NBE IRE 401 A 1 HETATM 7 C CAN IRE . . . E 3 9.053 -22.414 14.81 1 48.38 ? CAN IRE 401 A 1 HETATM 8 C CAJ IRE . . . E 3 7.981 -21.451 14.249 1 41.95 ? CAJ IRE 401 A 1 HETATM 9 C CAK IRE . . . E 3 6.595 -22.15 14.243 1 37.56 ? CAK IRE 401 A 1 HETATM 10 O OAV IRE . . . E 3 6.204 -22.686 15.53 1 39.54 ? OAV IRE 401 A 1 HETATM 11 C CBA IRE . . . E 3 4.971 -23.332 15.68 1 29.34 ? CBA IRE 401 A 1 HETATM 12 C CAZ IRE . . . E 3 4.779 -24.574 16.425 1 31.21 ? CAZ IRE 401 A 1 HETATM 13 C CAH IRE . . . E 3 3.504 -25.123 16.514 1 31.94 ? CAH IRE 401 A 1 HETATM 14 O OAT IRE . . . E 3 5.894 -25.159 17.017 1 28.01 ? OAT IRE 401 A 1 HETATM 15 C CAA IRE . . . E 3 5.747 -25.805 18.295 1 26 ? CAA IRE 401 A 1 HETATM 16 C CAI IRE . . . E 3 3.822 -22.778 15.104 1 23.41 ? CAI IRE 401 A 1 HETATM 17 C C5 IRE . . . E 3 2.487 -23.32 15.177 1 23.8 ? C5 IRE 401 A 1 HETATM 18 C C4 IRE . . . E 3 2.325 -24.529 15.904 1 26.72 ? C4 IRE 401 A 1 HETATM 19 N N3 IRE . . . E 3 1.057 -25.133 16.027 1 30.53 ? N3 IRE 401 A 1 HETATM 20 C C2 IRE . . . E 3 0.02 -24.522 15.435 1 30.05 ? C2 IRE 401 A 1 HETATM 21 N N1 IRE . . . E 3 0.061 -23.338 14.701 1 27.02 ? N1 IRE 401 A 1 HETATM 22 C C6 IRE . . . E 3 1.269 -22.727 14.557 1 26.18 ? C6 IRE 401 A 1 HETATM 23 N NAS IRE . . . E 3 1.297 -21.518 13.807 1 24.3 ? NAS IRE 401 A 1 HETATM 24 C CAY IRE . . . E 3 0.176 -20.677 13.387 1 32.44 ? CAY IRE 401 A 1 HETATM 25 C CAG IRE . . . E 3 -0.874 -20.306 14.252 1 42.01 ? CAG IRE 401 A 1 HETATM 26 C CAX IRE . . . E 3 -1.943 -19.507 13.863 1 44.26 ? CAX IRE 401 A 1 HETATM 27 CL CL IRE . . . E 3 -3.215 -19.089 14.988 1 52.42 ? CL IRE 401 A 1 HETATM 28 C CAW IRE . . . E 3 -2.033 -19.009 12.55 1 40.83 ? CAW IRE 401 A 1 HETATM 29 F FAB IRE . . . E 3 -3.002 -18.267 12.15 1 47.67 ? FAB IRE 401 A 1 HETATM 30 C CAD IRE . . . E 3 -0.998 -19.368 11.684 1 41.37 ? CAD IRE 401 A 1 HETATM 31 C CAE IRE . . . E 3 0.069 -20.171 12.082 1 34.5 ? CAE IRE 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #