data_5Y7Z # _model_server_result.job_id GgF-1ogryAtb5lhVAWgCmg _model_server_result.datetime_utc '2024-11-15 14:56:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5y7z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 5Y7Z # _exptl.entry_id 5Y7Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 446.902 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Gefitinib _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Y7Z _cell.length_a 76.353 _cell.length_b 85.513 _cell.length_c 149.042 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y7Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,K,L 1 1 B,C,H,I,J,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 29 D CYS 22 1_555 C SG CYS 103 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 D SG CYS 29 C CYS 22 1_555 D SG CYS 103 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C22 H24 Cl F N4 O3' _chem_comp.formula_weight 446.902 _chem_comp.id IRE _chem_comp.mon_nstd_flag . _chem_comp.name Gefitinib _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAO CAL IRE sing 173 n n CAO NBE IRE sing 174 n n CAO HAO1 IRE sing 175 n n CAO HAO2 IRE sing 176 n n CAL OAU IRE sing 177 n n CAL HAL1 IRE sing 178 n n CAL HAL2 IRE sing 179 n n OAU CAM IRE sing 180 n n CAM CAP IRE sing 181 n n CAM HAM1 IRE sing 182 n n CAM HAM2 IRE sing 183 n n CAP NBE IRE sing 184 n n CAP HAP1 IRE sing 185 n n CAP HAP2 IRE sing 186 n n NBE CAN IRE sing 187 n n CAN CAJ IRE sing 188 n n CAN HAN1 IRE sing 189 n n CAN HAN2 IRE sing 190 n n CAJ CAK IRE sing 191 n n CAJ HAJ1 IRE sing 192 n n CAJ HAJ2 IRE sing 193 n n CAK OAV IRE sing 194 n n CAK HAK1 IRE sing 195 n n CAK HAK2 IRE sing 196 n n OAV CBA IRE sing 197 n n CBA CAZ IRE doub 198 n y CBA CAI IRE sing 199 n y CAZ CAH IRE sing 200 n y CAZ OAT IRE sing 201 n n CAH C4 IRE doub 202 n y CAH HAH IRE sing 203 n n OAT CAA IRE sing 204 n n CAA HAA1 IRE sing 205 n n CAA HAA2 IRE sing 206 n n CAA HAA3 IRE sing 207 n n CAI C5 IRE doub 208 n y CAI HAI IRE sing 209 n n C5 C4 IRE sing 210 n y C5 C6 IRE sing 211 n y C4 N3 IRE sing 212 n y N3 C2 IRE doub 213 n y C2 N1 IRE sing 214 n y C2 H2 IRE sing 215 n n N1 C6 IRE doub 216 n y C6 NAS IRE sing 217 n n NAS CAY IRE sing 218 n n CAY CAG IRE doub 219 n y CAY CAE IRE sing 220 n y CAG CAX IRE sing 221 n y CAG HAG IRE sing 222 n n CAX CL IRE sing 223 n n CAX CAW IRE doub 224 n y CAW FAB IRE sing 225 n n CAW CAD IRE sing 226 n y CAD CAE IRE doub 227 n y CAD HAD IRE sing 228 n n CAE HAE IRE sing 229 n n NAS H1 IRE sing 230 n n # _atom_sites.entry_id 5Y7Z _atom_sites.fract_transf_matrix[1][1] 0.013097 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011694 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00671 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 IRE A 1 401 1 IRE IRE . F 4 SO4 A 1 402 1 SO4 SO4 . G 4 SO4 A 1 403 5 SO4 SO4 . H 3 IRE B 1 401 2 IRE IRE . I 4 SO4 B 1 402 3 SO4 SO4 . J 4 SO4 D 1 201 4 SO4 SO4 . K 4 SO4 C 1 201 2 SO4 SO4 . L 5 HOH A 1 501 1 HOH HOH . L 5 HOH A 2 502 2 HOH HOH . M 5 HOH B 1 501 9 HOH HOH . M 5 HOH B 2 502 10 HOH HOH . M 5 HOH B 3 503 8 HOH HOH . M 5 HOH B 4 504 4 HOH HOH . M 5 HOH B 5 505 11 HOH HOH . M 5 HOH B 6 506 5 HOH HOH . N 5 HOH D 1 301 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAO IRE . . . H 3 -5.466 21.869 -14.873 1 59.44 ? CAO IRE 401 B 1 HETATM 2 C CAL IRE . . . H 3 -6.884 21.585 -15.334 1 67 ? CAL IRE 401 B 1 HETATM 3 O OAU IRE . . . H 3 -6.924 21.505 -16.751 1 75.2 ? OAU IRE 401 B 1 HETATM 4 C CAM IRE . . . H 3 -5.993 20.584 -17.293 1 59.98 ? CAM IRE 401 B 1 HETATM 5 C CAP IRE . . . H 3 -4.588 20.836 -16.756 1 56.91 ? CAP IRE 401 B 1 HETATM 6 N NBE IRE . . . H 3 -4.679 20.694 -15.284 1 60.14 ? NBE IRE 401 B 1 HETATM 7 C CAN IRE . . . H 3 -3.326 20.938 -14.722 1 48.01 ? CAN IRE 401 B 1 HETATM 8 C CAJ IRE . . . H 3 -2.589 19.594 -14.843 1 44.27 ? CAJ IRE 401 B 1 HETATM 9 C CAK IRE . . . H 3 -1.368 19.736 -15.784 1 40.84 ? CAK IRE 401 B 1 HETATM 10 O OAV IRE . . . H 3 -0.124 19.946 -15.089 1 33.82 ? OAV IRE 401 B 1 HETATM 11 C CBA IRE . . . H 3 1.076 19.288 -15.449 1 28.25 ? CBA IRE 401 B 1 HETATM 12 C CAZ IRE . . . H 3 1.254 18.089 -16.31 1 29.04 ? CAZ IRE 401 B 1 HETATM 13 C CAH IRE . . . H 3 2.543 17.605 -16.52 1 25.36 ? CAH IRE 401 B 1 HETATM 14 O OAT IRE . . . H 3 0.151 17.467 -16.896 1 30.57 ? OAT IRE 401 B 1 HETATM 15 C CAA IRE . . . H 3 0.267 16.953 -18.235 1 28.73 ? CAA IRE 401 B 1 HETATM 16 C CAI IRE . . . H 3 2.25 19.819 -14.918 1 22.99 ? CAI IRE 401 B 1 HETATM 17 C C5 IRE . . . H 3 3.581 19.338 -15.122 1 22.95 ? C5 IRE 401 B 1 HETATM 18 C C4 IRE . . . H 3 3.739 18.198 -15.948 1 24.02 ? C4 IRE 401 B 1 HETATM 19 N N3 IRE . . . H 3 5.018 17.662 -16.197 1 26.79 ? N3 IRE 401 B 1 HETATM 20 C C2 IRE . . . H 3 6.063 18.276 -15.621 1 28.07 ? C2 IRE 401 B 1 HETATM 21 N N1 IRE . . . H 3 6.02 19.403 -14.797 1 30.51 ? N1 IRE 401 B 1 HETATM 22 C C6 IRE . . . H 3 4.796 19.94 -14.537 1 24.38 ? C6 IRE 401 B 1 HETATM 23 N NAS IRE . . . H 3 4.735 21.088 -13.698 1 23.34 ? NAS IRE 401 B 1 HETATM 24 C CAY IRE . . . H 3 5.798 22.003 -13.295 1 36.66 ? CAY IRE 401 B 1 HETATM 25 C CAG IRE . . . H 3 6.862 22.37 -14.142 1 42.74 ? CAG IRE 401 B 1 HETATM 26 C CAX IRE . . . H 3 7.875 23.242 -13.764 1 44.24 ? CAX IRE 401 B 1 HETATM 27 CL CL IRE . . . H 3 9.169 23.649 -14.864 1 51.77 ? CL IRE 401 B 1 HETATM 28 C CAW IRE . . . H 3 7.888 23.824 -12.483 1 38.26 ? CAW IRE 401 B 1 HETATM 29 F FAB IRE . . . H 3 8.804 24.635 -12.094 1 51.22 ? FAB IRE 401 B 1 HETATM 30 C CAD IRE . . . H 3 6.836 23.472 -11.637 1 36.21 ? CAD IRE 401 B 1 HETATM 31 C CAE IRE . . . H 3 5.826 22.596 -12.023 1 37.81 ? CAE IRE 401 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #