data_5Y9L # _model_server_result.job_id rqiErmpzxkqSHgtfshsP2A _model_server_result.datetime_utc '2024-11-08 20:48:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5y9l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 5Y9L # _exptl.entry_id 5Y9L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Y9L _cell.length_a 58.895 _cell.length_b 90.926 _cell.length_c 92.03 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y9L _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 136 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? disulf ? disulf2 A SG CYS 26 A CYS 42 1_555 A SG CYS 42 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 A SG CYS 108 A CYS 129 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf4 A SG CYS 115 A CYS 136 1_555 A SG CYS 182 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? disulf ? disulf5 A SG CYS 147 A CYS 168 1_555 A SG CYS 161 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 A SG CYS 172 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5Y9L _atom_sites.fract_transf_matrix[1][1] 0.016979 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010998 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010866 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8R3 A 1 301 301 8R3 ASB . C 3 CL A 1 302 1 CL CL . D 4 HOH A 1 401 13 HOH HOH . D 4 HOH A 2 402 10 HOH HOH . D 4 HOH A 3 403 6 HOH HOH . D 4 HOH A 4 404 14 HOH HOH . D 4 HOH A 5 405 40 HOH HOH . D 4 HOH A 6 406 43 HOH HOH . D 4 HOH A 7 407 2 HOH HOH . D 4 HOH A 8 408 49 HOH HOH . D 4 HOH A 9 409 16 HOH HOH . D 4 HOH A 10 410 22 HOH HOH . D 4 HOH A 11 411 33 HOH HOH . D 4 HOH A 12 412 12 HOH HOH . D 4 HOH A 13 413 4 HOH HOH . D 4 HOH A 14 414 11 HOH HOH . D 4 HOH A 15 415 32 HOH HOH . D 4 HOH A 16 416 26 HOH HOH . D 4 HOH A 17 417 8 HOH HOH . D 4 HOH A 18 418 9 HOH HOH . D 4 HOH A 19 419 24 HOH HOH . D 4 HOH A 20 420 23 HOH HOH . D 4 HOH A 21 421 42 HOH HOH . D 4 HOH A 22 422 7 HOH HOH . D 4 HOH A 23 423 5 HOH HOH . D 4 HOH A 24 424 30 HOH HOH . D 4 HOH A 25 425 29 HOH HOH . D 4 HOH A 26 426 18 HOH HOH . D 4 HOH A 27 427 38 HOH HOH . D 4 HOH A 28 428 21 HOH HOH . D 4 HOH A 29 429 25 HOH HOH . D 4 HOH A 30 430 31 HOH HOH . D 4 HOH A 31 431 35 HOH HOH . D 4 HOH A 32 432 20 HOH HOH . D 4 HOH A 33 433 19 HOH HOH . D 4 HOH A 34 434 47 HOH HOH . D 4 HOH A 35 435 41 HOH HOH . D 4 HOH A 36 436 34 HOH HOH . D 4 HOH A 37 437 27 HOH HOH . D 4 HOH A 38 438 36 HOH HOH . D 4 HOH A 39 439 63 HOH HOH . D 4 HOH A 40 440 57 HOH HOH . D 4 HOH A 41 441 62 HOH HOH . D 4 HOH A 42 442 3 HOH HOH . D 4 HOH A 43 443 44 HOH HOH . D 4 HOH A 44 444 46 HOH HOH . D 4 HOH A 45 445 48 HOH HOH . D 4 HOH A 46 446 50 HOH HOH . D 4 HOH A 47 447 28 HOH HOH . D 4 HOH A 48 448 66 HOH HOH . D 4 HOH A 49 449 65 HOH HOH . D 4 HOH A 50 450 15 HOH HOH . D 4 HOH A 51 451 64 HOH HOH . D 4 HOH A 52 452 61 HOH HOH . D 4 HOH A 53 453 56 HOH HOH . D 4 HOH A 54 454 55 HOH HOH . D 4 HOH A 55 455 1 HOH HOH . D 4 HOH A 56 456 59 HOH HOH . D 4 HOH A 57 457 39 HOH HOH . D 4 HOH A 58 458 67 HOH HOH . D 4 HOH A 59 459 51 HOH HOH . D 4 HOH A 60 460 58 HOH HOH . D 4 HOH A 61 461 60 HOH HOH . D 4 HOH A 62 462 45 HOH HOH . D 4 HOH A 63 463 37 HOH HOH . D 4 HOH A 64 464 53 HOH HOH . D 4 HOH A 65 465 54 HOH HOH . D 4 HOH A 66 466 17 HOH HOH . D 4 HOH A 67 467 52 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 28.383 _atom_site.Cartn_y 31.379 _atom_site.Cartn_z 36.248 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.04 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #