data_5Y9S # _model_server_result.job_id Y8aquM1X-umSCjDU_Z_cAQ _model_server_result.datetime_utc '2025-03-06 09:38:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5y9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":403}' # _entry.id 5Y9S # _exptl.entry_id 5Y9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 79.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BROMIDE ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Y9S _cell.length_a 113.669 _cell.length_b 221.895 _cell.length_c 57.875 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Y9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N # _chem_comp.formula 'Br -1' _chem_comp.formula_weight 79.904 _chem_comp.id BR _chem_comp.mon_nstd_flag . _chem_comp.name 'BROMIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5Y9S _atom_sites.fract_transf_matrix[1][1] 0.008797 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004507 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017279 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 BR A 1 401 300 BR BR . F 2 BR A 1 402 301 BR BR . G 2 BR B 1 401 299 BR BR . H 2 BR C 1 401 300 BR BR . I 2 BR C 1 402 301 BR BR . J 2 BR C 1 403 302 BR BR . K 2 BR C 1 404 303 BR BR . L 2 BR D 1 401 299 BR BR . M 2 BR D 1 402 300 BR BR . N 3 HOH A 1 501 338 HOH HOH . N 3 HOH A 2 502 313 HOH HOH . N 3 HOH A 3 503 334 HOH HOH . N 3 HOH A 4 504 320 HOH HOH . N 3 HOH A 5 505 305 HOH HOH . N 3 HOH A 6 506 307 HOH HOH . N 3 HOH A 7 507 324 HOH HOH . N 3 HOH A 8 508 326 HOH HOH . N 3 HOH A 9 509 309 HOH HOH . N 3 HOH A 10 510 327 HOH HOH . N 3 HOH A 11 511 333 HOH HOH . N 3 HOH A 12 512 322 HOH HOH . N 3 HOH A 13 513 303 HOH HOH . N 3 HOH A 14 514 318 HOH HOH . N 3 HOH A 15 515 314 HOH HOH . N 3 HOH A 16 516 337 HOH HOH . N 3 HOH A 17 517 304 HOH HOH . N 3 HOH A 18 518 340 HOH HOH . N 3 HOH A 19 519 302 HOH HOH . N 3 HOH A 20 520 330 HOH HOH . N 3 HOH A 21 521 321 HOH HOH . N 3 HOH A 22 522 308 HOH HOH . N 3 HOH A 23 523 339 HOH HOH . N 3 HOH A 24 524 312 HOH HOH . N 3 HOH A 25 525 319 HOH HOH . N 3 HOH A 26 526 317 HOH HOH . N 3 HOH A 27 527 306 HOH HOH . N 3 HOH A 28 528 336 HOH HOH . N 3 HOH A 29 529 310 HOH HOH . N 3 HOH A 30 530 323 HOH HOH . N 3 HOH A 31 531 304 HOH HOH . N 3 HOH A 32 532 335 HOH HOH . N 3 HOH A 33 533 311 HOH HOH . N 3 HOH A 34 534 315 HOH HOH . N 3 HOH A 35 535 332 HOH HOH . N 3 HOH A 36 536 328 HOH HOH . N 3 HOH A 37 537 333 HOH HOH . N 3 HOH A 38 538 316 HOH HOH . N 3 HOH A 39 539 331 HOH HOH . N 3 HOH A 40 540 329 HOH HOH . N 3 HOH A 41 541 301 HOH HOH . N 3 HOH A 42 542 325 HOH HOH . O 3 HOH B 1 501 303 HOH HOH . O 3 HOH B 2 502 307 HOH HOH . O 3 HOH B 3 503 317 HOH HOH . O 3 HOH B 4 504 311 HOH HOH . O 3 HOH B 5 505 319 HOH HOH . O 3 HOH B 6 506 308 HOH HOH . O 3 HOH B 7 507 304 HOH HOH . O 3 HOH B 8 508 316 HOH HOH . O 3 HOH B 9 509 301 HOH HOH . O 3 HOH B 10 510 305 HOH HOH . O 3 HOH B 11 511 323 HOH HOH . O 3 HOH B 12 512 302 HOH HOH . O 3 HOH B 13 513 315 HOH HOH . O 3 HOH B 14 514 322 HOH HOH . O 3 HOH B 15 515 309 HOH HOH . O 3 HOH B 16 516 312 HOH HOH . O 3 HOH B 17 517 313 HOH HOH . O 3 HOH B 18 518 318 HOH HOH . O 3 HOH B 19 519 300 HOH HOH . O 3 HOH B 20 520 321 HOH HOH . O 3 HOH B 21 521 314 HOH HOH . O 3 HOH B 22 522 310 HOH HOH . O 3 HOH B 23 523 306 HOH HOH . O 3 HOH B 24 524 324 HOH HOH . O 3 HOH B 25 525 341 HOH HOH . O 3 HOH B 26 526 320 HOH HOH . P 3 HOH C 1 501 334 HOH HOH . P 3 HOH C 2 502 325 HOH HOH . P 3 HOH C 3 503 307 HOH HOH . P 3 HOH C 4 504 327 HOH HOH . P 3 HOH C 5 505 314 HOH HOH . P 3 HOH C 6 506 310 HOH HOH . P 3 HOH C 7 507 312 HOH HOH . P 3 HOH C 8 508 324 HOH HOH . P 3 HOH C 9 509 337 HOH HOH . P 3 HOH C 10 510 317 HOH HOH . P 3 HOH C 11 511 336 HOH HOH . P 3 HOH C 12 512 335 HOH HOH . P 3 HOH C 13 513 322 HOH HOH . P 3 HOH C 14 514 323 HOH HOH . P 3 HOH C 15 515 319 HOH HOH . P 3 HOH C 16 516 305 HOH HOH . P 3 HOH C 17 517 339 HOH HOH . P 3 HOH C 18 518 308 HOH HOH . P 3 HOH C 19 519 321 HOH HOH . P 3 HOH C 20 520 326 HOH HOH . P 3 HOH C 21 521 313 HOH HOH . P 3 HOH C 22 522 311 HOH HOH . P 3 HOH C 23 523 316 HOH HOH . P 3 HOH C 24 524 306 HOH HOH . P 3 HOH C 25 525 330 HOH HOH . P 3 HOH C 26 526 328 HOH HOH . P 3 HOH C 27 527 309 HOH HOH . P 3 HOH C 28 528 315 HOH HOH . P 3 HOH C 29 529 320 HOH HOH . P 3 HOH C 30 530 332 HOH HOH . P 3 HOH C 31 531 318 HOH HOH . P 3 HOH C 32 532 338 HOH HOH . P 3 HOH C 33 533 325 HOH HOH . P 3 HOH C 34 534 331 HOH HOH . P 3 HOH C 35 535 329 HOH HOH . Q 3 HOH D 1 501 310 HOH HOH . Q 3 HOH D 2 502 330 HOH HOH . Q 3 HOH D 3 503 331 HOH HOH . Q 3 HOH D 4 504 321 HOH HOH . Q 3 HOH D 5 505 305 HOH HOH . Q 3 HOH D 6 506 325 HOH HOH . Q 3 HOH D 7 507 315 HOH HOH . Q 3 HOH D 8 508 326 HOH HOH . Q 3 HOH D 9 509 324 HOH HOH . Q 3 HOH D 10 510 307 HOH HOH . Q 3 HOH D 11 511 304 HOH HOH . Q 3 HOH D 12 512 309 HOH HOH . Q 3 HOH D 13 513 312 HOH HOH . Q 3 HOH D 14 514 314 HOH HOH . Q 3 HOH D 15 515 318 HOH HOH . Q 3 HOH D 16 516 316 HOH HOH . Q 3 HOH D 17 517 306 HOH HOH . Q 3 HOH D 18 518 311 HOH HOH . Q 3 HOH D 19 519 320 HOH HOH . Q 3 HOH D 20 520 313 HOH HOH . Q 3 HOH D 21 521 329 HOH HOH . Q 3 HOH D 22 522 302 HOH HOH . Q 3 HOH D 23 523 319 HOH HOH . Q 3 HOH D 24 524 303 HOH HOH . Q 3 HOH D 25 525 327 HOH HOH . Q 3 HOH D 26 526 332 HOH HOH . Q 3 HOH D 27 527 322 HOH HOH . Q 3 HOH D 28 528 323 HOH HOH . Q 3 HOH D 29 529 317 HOH HOH . Q 3 HOH D 30 530 328 HOH HOH . Q 3 HOH D 31 531 308 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BR _atom_site.label_atom_id BR _atom_site.label_comp_id BR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 2 _atom_site.Cartn_x 29.426 _atom_site.Cartn_y 70.587 _atom_site.Cartn_z 0.117 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 71.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BR _atom_site.auth_comp_id BR _atom_site.auth_seq_id 403 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #