data_5YA5 # _model_server_result.job_id b_R29SAFkB9inyqWrUZ2rA _model_server_result.datetime_utc '2024-11-22 20:00:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ya5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1401}' # _entry.id 5YA5 # _exptl.entry_id 5YA5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 361.42 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[3-(4-methoxybenzyl)[1,2,4]triazolo[3,4-b][1,3,4]thiadiazol-6-yl]-1H-indole _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5YA5 _cell.length_a 42.36 _cell.length_b 47.34 _cell.length_c 158.69 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YA5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H15 N5 O S' _chem_comp.formula_weight 361.42 _chem_comp.id 6TD _chem_comp.mon_nstd_flag . _chem_comp.name 2-[3-(4-methoxybenzyl)[1,2,4]triazolo[3,4-b][1,3,4]thiadiazol-6-yl]-1H-indole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 6-(1H-indol-2-yl)-3-(4-methoxybenzyl)-[1,2,4]triazolo[3,4-b][1,3,4]thiadiazole # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAK CAU 6TD sing 1 n n CAK CAR 6TD sing 2 n n NAL CAU 6TD doub 3 n y NAL NAM 6TD sing 4 n y CAU NAZ 6TD sing 5 n y CAR CAE 6TD doub 6 n y CAR CAD 6TD sing 7 n y NAM CAY 6TD doub 8 n y CAE CAG 6TD sing 9 n y NAZ CAY 6TD sing 10 n y NAZ NAN 6TD sing 11 n y CAD CAF 6TD doub 12 n y CAY SAQ 6TD sing 13 n y NAN CAV 6TD doub 14 n y CAG CAS 6TD doub 15 n y CAF CAS 6TD sing 16 n y CAV SAQ 6TD sing 17 n y CAV CAT 6TD sing 18 n n CAS OAP 6TD sing 19 n n CAJ CAT 6TD doub 20 n y CAJ CAW 6TD sing 21 n y CAT NAO 6TD sing 22 n y OAP CAA 6TD sing 23 n n CAW CAH 6TD doub 24 n y CAW CAX 6TD sing 25 n y NAO CAX 6TD sing 26 n y CAH CAB 6TD sing 27 n y CAX CAI 6TD doub 28 n y CAB CAC 6TD doub 29 n y CAI CAC 6TD sing 30 n y CAA H1 6TD sing 31 n n CAA H2 6TD sing 32 n n CAA H3 6TD sing 33 n n CAG H4 6TD sing 34 n n CAE H5 6TD sing 35 n n CAF H6 6TD sing 36 n n CAD H7 6TD sing 37 n n CAK H8 6TD sing 38 n n CAK H9 6TD sing 39 n n CAJ H10 6TD sing 40 n n CAH H11 6TD sing 41 n n CAB H12 6TD sing 42 n n CAC H13 6TD sing 43 n n CAI H14 6TD sing 44 n n NAO H15 6TD sing 45 n n # _atom_sites.entry_id 5YA5 _atom_sites.fract_transf_matrix[1][1] 0.023607 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006302 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6TD A 1 1401 1 6TD DRG . C 3 HOH A 1 1501 49 HOH HOH . C 3 HOH A 2 1502 105 HOH HOH . C 3 HOH A 3 1503 97 HOH HOH . C 3 HOH A 4 1504 63 HOH HOH . C 3 HOH A 5 1505 59 HOH HOH . C 3 HOH A 6 1506 85 HOH HOH . C 3 HOH A 7 1507 73 HOH HOH . C 3 HOH A 8 1508 68 HOH HOH . C 3 HOH A 9 1509 84 HOH HOH . C 3 HOH A 10 1510 36 HOH HOH . C 3 HOH A 11 1511 12 HOH HOH . C 3 HOH A 12 1512 27 HOH HOH . C 3 HOH A 13 1513 69 HOH HOH . C 3 HOH A 14 1514 93 HOH HOH . C 3 HOH A 15 1515 23 HOH HOH . C 3 HOH A 16 1516 41 HOH HOH . C 3 HOH A 17 1517 52 HOH HOH . C 3 HOH A 18 1518 38 HOH HOH . C 3 HOH A 19 1519 4 HOH HOH . C 3 HOH A 20 1520 30 HOH HOH . C 3 HOH A 21 1521 42 HOH HOH . C 3 HOH A 22 1522 55 HOH HOH . C 3 HOH A 23 1523 106 HOH HOH . C 3 HOH A 24 1524 19 HOH HOH . C 3 HOH A 25 1525 94 HOH HOH . C 3 HOH A 26 1526 10 HOH HOH . C 3 HOH A 27 1527 79 HOH HOH . C 3 HOH A 28 1528 46 HOH HOH . C 3 HOH A 29 1529 7 HOH HOH . C 3 HOH A 30 1530 18 HOH HOH . C 3 HOH A 31 1531 25 HOH HOH . C 3 HOH A 32 1532 72 HOH HOH . C 3 HOH A 33 1533 99 HOH HOH . C 3 HOH A 34 1534 82 HOH HOH . C 3 HOH A 35 1535 9 HOH HOH . C 3 HOH A 36 1536 14 HOH HOH . C 3 HOH A 37 1537 16 HOH HOH . C 3 HOH A 38 1538 89 HOH HOH . C 3 HOH A 39 1539 22 HOH HOH . C 3 HOH A 40 1540 74 HOH HOH . C 3 HOH A 41 1541 15 HOH HOH . C 3 HOH A 42 1542 76 HOH HOH . C 3 HOH A 43 1543 3 HOH HOH . C 3 HOH A 44 1544 71 HOH HOH . C 3 HOH A 45 1545 54 HOH HOH . C 3 HOH A 46 1546 77 HOH HOH . C 3 HOH A 47 1547 1 HOH HOH . C 3 HOH A 48 1548 24 HOH HOH . C 3 HOH A 49 1549 29 HOH HOH . C 3 HOH A 50 1550 81 HOH HOH . C 3 HOH A 51 1551 2 HOH HOH . C 3 HOH A 52 1552 33 HOH HOH . C 3 HOH A 53 1553 48 HOH HOH . C 3 HOH A 54 1554 108 HOH HOH . C 3 HOH A 55 1555 100 HOH HOH . C 3 HOH A 56 1556 103 HOH HOH . C 3 HOH A 57 1557 56 HOH HOH . C 3 HOH A 58 1558 92 HOH HOH . C 3 HOH A 59 1559 13 HOH HOH . C 3 HOH A 60 1560 83 HOH HOH . C 3 HOH A 61 1561 66 HOH HOH . C 3 HOH A 62 1562 107 HOH HOH . C 3 HOH A 63 1563 40 HOH HOH . C 3 HOH A 64 1564 31 HOH HOH . C 3 HOH A 65 1565 8 HOH HOH . C 3 HOH A 66 1566 98 HOH HOH . C 3 HOH A 67 1567 95 HOH HOH . C 3 HOH A 68 1568 37 HOH HOH . C 3 HOH A 69 1569 6 HOH HOH . C 3 HOH A 70 1570 11 HOH HOH . C 3 HOH A 71 1571 91 HOH HOH . C 3 HOH A 72 1572 96 HOH HOH . C 3 HOH A 73 1573 47 HOH HOH . C 3 HOH A 74 1574 43 HOH HOH . C 3 HOH A 75 1575 5 HOH HOH . C 3 HOH A 76 1576 21 HOH HOH . C 3 HOH A 77 1577 65 HOH HOH . C 3 HOH A 78 1578 53 HOH HOH . C 3 HOH A 79 1579 51 HOH HOH . C 3 HOH A 80 1580 35 HOH HOH . C 3 HOH A 81 1581 50 HOH HOH . C 3 HOH A 82 1582 58 HOH HOH . C 3 HOH A 83 1583 78 HOH HOH . C 3 HOH A 84 1584 90 HOH HOH . C 3 HOH A 85 1585 64 HOH HOH . C 3 HOH A 86 1586 17 HOH HOH . C 3 HOH A 87 1587 61 HOH HOH . C 3 HOH A 88 1588 44 HOH HOH . C 3 HOH A 89 1589 34 HOH HOH . C 3 HOH A 90 1590 75 HOH HOH . C 3 HOH A 91 1591 28 HOH HOH . C 3 HOH A 92 1592 32 HOH HOH . C 3 HOH A 93 1593 45 HOH HOH . C 3 HOH A 94 1594 57 HOH HOH . C 3 HOH A 95 1595 20 HOH HOH . C 3 HOH A 96 1596 86 HOH HOH . C 3 HOH A 97 1597 60 HOH HOH . C 3 HOH A 98 1598 104 HOH HOH . C 3 HOH A 99 1599 101 HOH HOH . C 3 HOH A 100 1600 102 HOH HOH . C 3 HOH A 101 1601 62 HOH HOH . C 3 HOH A 102 1602 87 HOH HOH . C 3 HOH A 103 1603 88 HOH HOH . C 3 HOH A 104 1604 26 HOH HOH . C 3 HOH A 105 1605 70 HOH HOH . C 3 HOH A 106 1606 39 HOH HOH . C 3 HOH A 107 1607 80 HOH HOH . C 3 HOH A 108 1608 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 6TD . . . B 2 16.556 -15.011 -17.224 1 39.14 ? CAA 6TD 1401 A 1 HETATM 2 O OAP 6TD . . . B 2 17.239 -13.912 -17.709 1 37.52 ? OAP 6TD 1401 A 1 HETATM 3 C CAS 6TD . . . B 2 16.625 -13.1 -18.631 1 33.92 ? CAS 6TD 1401 A 1 HETATM 4 C CAG 6TD . . . B 2 17.321 -12.021 -19.153 1 40.89 ? CAG 6TD 1401 A 1 HETATM 5 C CAE 6TD . . . B 2 16.717 -11.191 -20.083 1 35.25 ? CAE 6TD 1401 A 1 HETATM 6 C CAF 6TD . . . B 2 15.324 -13.347 -19.034 1 33.2 ? CAF 6TD 1401 A 1 HETATM 7 C CAD 6TD . . . B 2 14.714 -12.513 -19.964 1 38.14 ? CAD 6TD 1401 A 1 HETATM 8 C CAR 6TD . . . B 2 15.414 -11.432 -20.488 1 37.4 ? CAR 6TD 1401 A 1 HETATM 9 C CAK 6TD . . . B 2 14.788 -10.521 -21.493 1 35.69 ? CAK 6TD 1401 A 1 HETATM 10 C CAU 6TD . . . B 2 14.377 -9.219 -20.869 1 41.55 ? CAU 6TD 1401 A 1 HETATM 11 N NAL 6TD . . . B 2 14.952 -8.036 -21.017 1 39.39 ? NAL 6TD 1401 A 1 HETATM 12 N NAM 6TD . . . B 2 14.27 -7.137 -20.301 1 40.46 ? NAM 6TD 1401 A 1 HETATM 13 C CAY 6TD . . . B 2 13.239 -7.736 -19.677 1 39.13 ? CAY 6TD 1401 A 1 HETATM 14 S SAQ 6TD . . . B 2 11.875 -7.577 -18.619 1 38.69 ? SAQ 6TD 1401 A 1 HETATM 15 N NAZ 6TD . . . B 2 13.281 -9.05 -20.022 1 40.23 ? NAZ 6TD 1401 A 1 HETATM 16 N NAN 6TD . . . B 2 12.32 -9.88 -19.496 1 41.35 ? NAN 6TD 1401 A 1 HETATM 17 C CAV 6TD . . . B 2 11.45 -9.276 -18.679 1 43.78 ? CAV 6TD 1401 A 1 HETATM 18 C CAT 6TD . . . B 2 10.296 -9.929 -18.038 1 42.65 ? CAT 6TD 1401 A 1 HETATM 19 C CAJ 6TD . . . B 2 9.969 -11.284 -18.128 1 42.26 ? CAJ 6TD 1401 A 1 HETATM 20 C CAW 6TD . . . B 2 8.742 -11.422 -17.403 1 42.71 ? CAW 6TD 1401 A 1 HETATM 21 C CAH 6TD . . . B 2 7.91 -12.529 -17.107 1 45.29 ? CAH 6TD 1401 A 1 HETATM 22 C CAB 6TD . . . B 2 6.749 -12.341 -16.355 1 44.46 ? CAB 6TD 1401 A 1 HETATM 23 C CAC 6TD . . . B 2 6.397 -11.065 -15.893 1 43.3 ? CAC 6TD 1401 A 1 HETATM 24 C CAI 6TD . . . B 2 7.213 -9.974 -16.178 1 40.56 ? CAI 6TD 1401 A 1 HETATM 25 C CAX 6TD . . . B 2 8.398 -10.168 -16.943 1 43.72 ? CAX 6TD 1401 A 1 HETATM 26 N NAO 6TD . . . B 2 9.352 -9.276 -17.359 1 44.65 ? NAO 6TD 1401 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #