data_5YAD
#
_model_server_result.job_id            A5zaUEqcqF9nmq20-WkQ6A 
_model_server_result.datetime_utc      '2024-10-28 02:37:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5yad 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":101}' 
#
_entry.id    5YAD 
#
_exptl.entry_id    5YAD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5YAD 
_cell.length_a            54.974 
_cell.length_b            53.959 
_cell.length_c            67.45 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5YAD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C THR 16 A THR 16 1_555 A N MSE 17 A MSE 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A C MSE 17 A MSE 17 1_555 A N SER 18 A SER 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.286 ? 
covale ? covale3 B C THR 16 B THR 16 1_555 B N MSE 17 B MSE 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? 
covale ? covale4 B C MSE 17 B MSE 17 1_555 B N SER 18 B SER 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 303 n n 
S O2 SO4 doub 304 n n 
S O3 SO4 sing 305 n n 
S O4 SO4 sing 306 n n 
#
_atom_sites.entry_id                     5YAD 
_atom_sites.fract_transf_matrix[1][1]    0.01819 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018533 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014826 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 101 2 SO4 SO4 . 
D 3 GOL A 1 102 303 GOL GOL . 
E 2 SO4 B 1 101 3 SO4 SO4 . 
F 2 SO4 B 1 102 4 SO4 SO4 . 
G 4 HOH A 1 201 13 HOH HOH . 
G 4 HOH A 2 202 1 HOH HOH . 
G 4 HOH A 3 203 69 HOH HOH . 
G 4 HOH A 4 204 85 HOH HOH . 
G 4 HOH A 5 205 100 HOH HOH . 
G 4 HOH A 6 206 6 HOH HOH . 
G 4 HOH A 7 207 48 HOH HOH . 
G 4 HOH A 8 208 71 HOH HOH . 
G 4 HOH A 9 209 38 HOH HOH . 
G 4 HOH A 10 210 88 HOH HOH . 
G 4 HOH A 11 211 164 HOH HOH . 
G 4 HOH A 12 212 97 HOH HOH . 
G 4 HOH A 13 213 72 HOH HOH . 
G 4 HOH A 14 214 33 HOH HOH . 
G 4 HOH A 15 215 166 HOH HOH . 
G 4 HOH A 16 216 82 HOH HOH . 
G 4 HOH A 17 217 138 HOH HOH . 
G 4 HOH A 18 218 124 HOH HOH . 
G 4 HOH A 19 219 111 HOH HOH . 
G 4 HOH A 20 220 54 HOH HOH . 
G 4 HOH A 21 221 56 HOH HOH . 
G 4 HOH A 22 222 43 HOH HOH . 
G 4 HOH A 23 223 140 HOH HOH . 
G 4 HOH A 24 224 25 HOH HOH . 
G 4 HOH A 25 225 7 HOH HOH . 
G 4 HOH A 26 226 35 HOH HOH . 
G 4 HOH A 27 227 37 HOH HOH . 
G 4 HOH A 28 228 42 HOH HOH . 
G 4 HOH A 29 229 84 HOH HOH . 
G 4 HOH A 30 230 113 HOH HOH . 
G 4 HOH A 31 231 168 HOH HOH . 
G 4 HOH A 32 232 65 HOH HOH . 
G 4 HOH A 33 233 9 HOH HOH . 
G 4 HOH A 34 234 162 HOH HOH . 
G 4 HOH A 35 235 87 HOH HOH . 
G 4 HOH A 36 236 94 HOH HOH . 
G 4 HOH A 37 237 19 HOH HOH . 
G 4 HOH A 38 238 118 HOH HOH . 
G 4 HOH A 39 239 119 HOH HOH . 
G 4 HOH A 40 240 16 HOH HOH . 
G 4 HOH A 41 241 95 HOH HOH . 
G 4 HOH A 42 242 146 HOH HOH . 
G 4 HOH A 43 243 141 HOH HOH . 
G 4 HOH A 44 244 67 HOH HOH . 
G 4 HOH A 45 245 34 HOH HOH . 
G 4 HOH A 46 246 26 HOH HOH . 
G 4 HOH A 47 247 169 HOH HOH . 
G 4 HOH A 48 248 170 HOH HOH . 
G 4 HOH A 49 249 153 HOH HOH . 
G 4 HOH A 50 250 142 HOH HOH . 
G 4 HOH A 51 251 145 HOH HOH . 
G 4 HOH A 52 252 128 HOH HOH . 
G 4 HOH A 53 253 154 HOH HOH . 
G 4 HOH A 54 254 133 HOH HOH . 
G 4 HOH A 55 255 172 HOH HOH . 
G 4 HOH A 56 256 80 HOH HOH . 
G 4 HOH A 57 257 86 HOH HOH . 
G 4 HOH A 58 258 61 HOH HOH . 
G 4 HOH A 59 259 122 HOH HOH . 
G 4 HOH A 60 260 55 HOH HOH . 
G 4 HOH A 61 261 90 HOH HOH . 
G 4 HOH A 62 262 116 HOH HOH . 
H 4 HOH B 1 201 32 HOH HOH . 
H 4 HOH B 2 202 171 HOH HOH . 
H 4 HOH B 3 203 58 HOH HOH . 
H 4 HOH B 4 204 28 HOH HOH . 
H 4 HOH B 5 205 39 HOH HOH . 
H 4 HOH B 6 206 59 HOH HOH . 
H 4 HOH B 7 207 75 HOH HOH . 
H 4 HOH B 8 208 22 HOH HOH . 
H 4 HOH B 9 209 60 HOH HOH . 
H 4 HOH B 10 210 24 HOH HOH . 
H 4 HOH B 11 211 89 HOH HOH . 
H 4 HOH B 12 212 83 HOH HOH . 
H 4 HOH B 13 213 165 HOH HOH . 
H 4 HOH B 14 214 12 HOH HOH . 
H 4 HOH B 15 215 91 HOH HOH . 
H 4 HOH B 16 216 126 HOH HOH . 
H 4 HOH B 17 217 137 HOH HOH . 
H 4 HOH B 18 218 68 HOH HOH . 
H 4 HOH B 19 219 136 HOH HOH . 
H 4 HOH B 20 220 62 HOH HOH . 
H 4 HOH B 21 221 44 HOH HOH . 
H 4 HOH B 22 222 103 HOH HOH . 
H 4 HOH B 23 223 74 HOH HOH . 
H 4 HOH B 24 224 63 HOH HOH . 
H 4 HOH B 25 225 15 HOH HOH . 
H 4 HOH B 26 226 29 HOH HOH . 
H 4 HOH B 27 227 158 HOH HOH . 
H 4 HOH B 28 228 132 HOH HOH . 
H 4 HOH B 29 229 41 HOH HOH . 
H 4 HOH B 30 230 27 HOH HOH . 
H 4 HOH B 31 231 17 HOH HOH . 
H 4 HOH B 32 232 152 HOH HOH . 
H 4 HOH B 33 233 66 HOH HOH . 
H 4 HOH B 34 234 114 HOH HOH . 
H 4 HOH B 35 235 45 HOH HOH . 
H 4 HOH B 36 236 130 HOH HOH . 
H 4 HOH B 37 237 70 HOH HOH . 
H 4 HOH B 38 238 73 HOH HOH . 
H 4 HOH B 39 239 47 HOH HOH . 
H 4 HOH B 40 240 53 HOH HOH . 
H 4 HOH B 41 241 110 HOH HOH . 
H 4 HOH B 42 242 20 HOH HOH . 
H 4 HOH B 43 243 143 HOH HOH . 
H 4 HOH B 44 244 92 HOH HOH . 
H 4 HOH B 45 245 46 HOH HOH . 
H 4 HOH B 46 246 52 HOH HOH . 
H 4 HOH B 47 247 160 HOH HOH . 
H 4 HOH B 48 248 102 HOH HOH . 
H 4 HOH B 49 249 31 HOH HOH . 
H 4 HOH B 50 250 156 HOH HOH . 
H 4 HOH B 51 251 163 HOH HOH . 
H 4 HOH B 52 252 81 HOH HOH . 
H 4 HOH B 53 253 167 HOH HOH . 
H 4 HOH B 54 254 99 HOH HOH . 
H 4 HOH B 55 255 30 HOH HOH . 
H 4 HOH B 56 256 123 HOH HOH . 
H 4 HOH B 57 257 129 HOH HOH . 
H 4 HOH B 58 258 112 HOH HOH . 
H 4 HOH B 59 259 77 HOH HOH . 
H 4 HOH B 60 260 127 HOH HOH . 
H 4 HOH B 61 261 131 HOH HOH . 
H 4 HOH B 62 262 117 HOH HOH . 
H 4 HOH B 63 263 51 HOH HOH . 
H 4 HOH B 64 264 64 HOH HOH . 
H 4 HOH B 65 265 98 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . E 2 11.2 -2.449 47.03 1 86.81 ? S SO4 101 B 1 
HETATM 2 O O1 SO4 . . . E 2 11.875 -3.285 45.997 1 81.76 ? O1 SO4 101 B 1 
HETATM 3 O O2 SO4 . . . E 2 10.065 -1.736 46.397 1 97.58 ? O2 SO4 101 B 1 
HETATM 4 O O3 SO4 . . . E 2 10.679 -3.298 48.143 1 78.86 ? O3 SO4 101 B 1 
HETATM 5 O O4 SO4 . . . E 2 12.108 -1.384 47.537 1 84.42 ? O4 SO4 101 B 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           5 
#