data_5YAW # _model_server_result.job_id GzFb0TIO7WzdHu-DYnhk3g _model_server_result.datetime_utc '2025-08-31 18:53:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5yaw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5YAW # _exptl.entry_id 5YAW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 367.508 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[(4-methoxyphenyl)methylsulfanyl]-5-(2-methylpropyl)-4-(phenylmethyl)-1,2,4-triazole _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5YAW _cell.length_a 56.148 _cell.length_b 56.148 _cell.length_c 116.161 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YAW _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H25 N3 O S' _chem_comp.formula_weight 367.508 _chem_comp.id 8SL _chem_comp.mon_nstd_flag . _chem_comp.name 3-[(4-methoxyphenyl)methylsulfanyl]-5-(2-methylpropyl)-4-(phenylmethyl)-1,2,4-triazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O25 C26 8SL sing 1 n n O25 C22 8SL sing 2 n n C21 C22 8SL doub 3 n y C21 C20 8SL sing 4 n y C22 C23 8SL sing 5 n y C20 C19 8SL doub 6 n y C23 C24 8SL doub 7 n y C19 C24 8SL sing 8 n y C19 C18 8SL sing 9 n n N02 N01 8SL sing 10 n y N02 C03 8SL doub 11 n y N01 C05 8SL doub 12 n y C09 C08 8SL sing 13 n n C18 S06 8SL sing 14 n n C08 C07 8SL sing 15 n n C08 C10 8SL sing 16 n n C03 C07 8SL sing 17 n n C03 N04 8SL sing 18 n y C05 S06 8SL sing 19 n n C05 N04 8SL sing 20 n y N04 C11 8SL sing 21 n n C11 C12 8SL sing 22 n n C12 C13 8SL doub 23 n y C12 C17 8SL sing 24 n y C13 C14 8SL sing 25 n y C17 C16 8SL doub 26 n y C14 C15 8SL doub 27 n y C16 C15 8SL sing 28 n y C10 H1 8SL sing 29 n n C10 H2 8SL sing 30 n n C10 H3 8SL sing 31 n n C13 H4 8SL sing 32 n n C15 H5 8SL sing 33 n n C17 H6 8SL sing 34 n n C20 H7 8SL sing 35 n n C21 H8 8SL sing 36 n n C24 H9 8SL sing 37 n n C26 H10 8SL sing 38 n n C26 H11 8SL sing 39 n n C26 H12 8SL sing 40 n n C07 H13 8SL sing 41 n n C07 H14 8SL sing 42 n n C08 H15 8SL sing 43 n n C09 H16 8SL sing 44 n n C09 H17 8SL sing 45 n n C09 H18 8SL sing 46 n n C11 H19 8SL sing 47 n n C11 H20 8SL sing 48 n n C14 H21 8SL sing 49 n n C16 H22 8SL sing 50 n n C18 H23 8SL sing 51 n n C18 H24 8SL sing 52 n n C23 H25 8SL sing 53 n n # _atom_sites.entry_id 5YAW _atom_sites.fract_transf_matrix[1][1] 0.01781 _atom_sites.fract_transf_matrix[1][2] 0.010283 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020565 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008609 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8SL B 1 201 1 8SL LIG . C 3 HOH B 1 301 92 HOH HOH . C 3 HOH B 2 302 93 HOH HOH . C 3 HOH B 3 303 47 HOH HOH . C 3 HOH B 4 304 112 HOH HOH . C 3 HOH B 5 305 91 HOH HOH . C 3 HOH B 6 306 94 HOH HOH . C 3 HOH B 7 307 76 HOH HOH . C 3 HOH B 8 308 1 HOH HOH . C 3 HOH B 9 309 79 HOH HOH . C 3 HOH B 10 310 120 HOH HOH . C 3 HOH B 11 311 97 HOH HOH . C 3 HOH B 12 312 56 HOH HOH . C 3 HOH B 13 313 32 HOH HOH . C 3 HOH B 14 314 25 HOH HOH . C 3 HOH B 15 315 118 HOH HOH . C 3 HOH B 16 316 75 HOH HOH . C 3 HOH B 17 317 17 HOH HOH . C 3 HOH B 18 318 20 HOH HOH . C 3 HOH B 19 319 115 HOH HOH . C 3 HOH B 20 320 44 HOH HOH . C 3 HOH B 21 321 5 HOH HOH . C 3 HOH B 22 322 83 HOH HOH . C 3 HOH B 23 323 11 HOH HOH . C 3 HOH B 24 324 74 HOH HOH . C 3 HOH B 25 325 55 HOH HOH . C 3 HOH B 26 326 45 HOH HOH . C 3 HOH B 27 327 122 HOH HOH . C 3 HOH B 28 328 38 HOH HOH . C 3 HOH B 29 329 37 HOH HOH . C 3 HOH B 30 330 57 HOH HOH . C 3 HOH B 31 331 67 HOH HOH . C 3 HOH B 32 332 61 HOH HOH . C 3 HOH B 33 333 3 HOH HOH . C 3 HOH B 34 334 41 HOH HOH . C 3 HOH B 35 335 116 HOH HOH . C 3 HOH B 36 336 21 HOH HOH . C 3 HOH B 37 337 86 HOH HOH . C 3 HOH B 38 338 113 HOH HOH . C 3 HOH B 39 339 22 HOH HOH . C 3 HOH B 40 340 36 HOH HOH . C 3 HOH B 41 341 63 HOH HOH . C 3 HOH B 42 342 82 HOH HOH . C 3 HOH B 43 343 69 HOH HOH . C 3 HOH B 44 344 111 HOH HOH . C 3 HOH B 45 345 49 HOH HOH . C 3 HOH B 46 346 7 HOH HOH . C 3 HOH B 47 347 66 HOH HOH . C 3 HOH B 48 348 58 HOH HOH . C 3 HOH B 49 349 33 HOH HOH . C 3 HOH B 50 350 15 HOH HOH . C 3 HOH B 51 351 14 HOH HOH . C 3 HOH B 52 352 27 HOH HOH . C 3 HOH B 53 353 10 HOH HOH . C 3 HOH B 54 354 28 HOH HOH . C 3 HOH B 55 355 12 HOH HOH . C 3 HOH B 56 356 125 HOH HOH . C 3 HOH B 57 357 95 HOH HOH . C 3 HOH B 58 358 4 HOH HOH . C 3 HOH B 59 359 73 HOH HOH . C 3 HOH B 60 360 16 HOH HOH . C 3 HOH B 61 361 70 HOH HOH . C 3 HOH B 62 362 68 HOH HOH . C 3 HOH B 63 363 8 HOH HOH . C 3 HOH B 64 364 34 HOH HOH . C 3 HOH B 65 365 30 HOH HOH . C 3 HOH B 66 366 71 HOH HOH . C 3 HOH B 67 367 18 HOH HOH . C 3 HOH B 68 368 52 HOH HOH . C 3 HOH B 69 369 48 HOH HOH . C 3 HOH B 70 370 81 HOH HOH . C 3 HOH B 71 371 39 HOH HOH . C 3 HOH B 72 372 23 HOH HOH . C 3 HOH B 73 373 46 HOH HOH . C 3 HOH B 74 374 35 HOH HOH . C 3 HOH B 75 375 43 HOH HOH . C 3 HOH B 76 376 119 HOH HOH . C 3 HOH B 77 377 26 HOH HOH . C 3 HOH B 78 378 51 HOH HOH . C 3 HOH B 79 379 108 HOH HOH . C 3 HOH B 80 380 50 HOH HOH . C 3 HOH B 81 381 100 HOH HOH . C 3 HOH B 82 382 90 HOH HOH . C 3 HOH B 83 383 40 HOH HOH . C 3 HOH B 84 384 123 HOH HOH . C 3 HOH B 85 385 9 HOH HOH . C 3 HOH B 86 386 85 HOH HOH . C 3 HOH B 87 387 104 HOH HOH . C 3 HOH B 88 388 6 HOH HOH . C 3 HOH B 89 389 60 HOH HOH . C 3 HOH B 90 390 64 HOH HOH . C 3 HOH B 91 391 114 HOH HOH . C 3 HOH B 92 392 84 HOH HOH . C 3 HOH B 93 393 54 HOH HOH . C 3 HOH B 94 394 13 HOH HOH . C 3 HOH B 95 395 89 HOH HOH . C 3 HOH B 96 396 98 HOH HOH . C 3 HOH B 97 397 72 HOH HOH . C 3 HOH B 98 398 110 HOH HOH . C 3 HOH B 99 399 24 HOH HOH . C 3 HOH B 100 400 19 HOH HOH . C 3 HOH B 101 401 96 HOH HOH . C 3 HOH B 102 402 77 HOH HOH . C 3 HOH B 103 403 102 HOH HOH . C 3 HOH B 104 404 29 HOH HOH . C 3 HOH B 105 405 80 HOH HOH . C 3 HOH B 106 406 99 HOH HOH . C 3 HOH B 107 407 53 HOH HOH . C 3 HOH B 108 408 109 HOH HOH . C 3 HOH B 109 409 117 HOH HOH . C 3 HOH B 110 410 2 HOH HOH . C 3 HOH B 111 411 121 HOH HOH . C 3 HOH B 112 412 65 HOH HOH . C 3 HOH B 113 413 105 HOH HOH . C 3 HOH B 114 414 62 HOH HOH . C 3 HOH B 115 415 103 HOH HOH . C 3 HOH B 116 416 59 HOH HOH . C 3 HOH B 117 417 78 HOH HOH . C 3 HOH B 118 418 42 HOH HOH . C 3 HOH B 119 419 106 HOH HOH . C 3 HOH B 120 420 124 HOH HOH . C 3 HOH B 121 421 87 HOH HOH . C 3 HOH B 122 422 88 HOH HOH . C 3 HOH B 123 423 31 HOH HOH . C 3 HOH B 124 424 107 HOH HOH . C 3 HOH B 125 425 101 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 8SL . . . B 2 33.669 -4.817 -6.178 1 43.25 ? C10 8SL 201 B 1 HETATM 2 C C13 8SL . . . B 2 31.316 -10.427 -4.178 1 39.76 ? C13 8SL 201 B 1 HETATM 3 C C15 8SL . . . B 2 33.272 -10.955 -2.925 1 36.74 ? C15 8SL 201 B 1 HETATM 4 C C17 8SL . . . B 2 32.793 -8.734 -3.582 1 43.91 ? C17 8SL 201 B 1 HETATM 5 C C20 8SL . . . B 2 27.341 -10.813 -9.965 1 38.21 ? C20 8SL 201 B 1 HETATM 6 C C21 8SL . . . B 2 26.535 -10.709 -11.092 1 39.55 ? C21 8SL 201 B 1 HETATM 7 C C22 8SL . . . B 2 25.324 -10.146 -10.983 1 36.74 ? C22 8SL 201 B 1 HETATM 8 C C24 8SL . . . B 2 25.685 -9.771 -8.621 1 36.96 ? C24 8SL 201 B 1 HETATM 9 C C26 8SL . . . B 2 23.175 -9.742 -11.992 1 35.7 ? C26 8SL 201 B 1 HETATM 10 N N01 8SL . . . B 2 30.355 -8.673 -8.364 1 43.32 ? N01 8SL 201 B 1 HETATM 11 N N02 8SL . . . B 2 31.545 -8.153 -8.38 1 40.14 ? N02 8SL 201 B 1 HETATM 12 C C03 8SL . . . B 2 31.875 -7.889 -7.168 1 41.98 ? C03 8SL 201 B 1 HETATM 13 N N04 8SL . . . B 2 30.858 -8.256 -6.361 1 41.64 ? N04 8SL 201 B 1 HETATM 14 C C05 8SL . . . B 2 29.933 -8.72 -7.127 1 46.38 ? C05 8SL 201 B 1 HETATM 15 S S06 8SL . . . B 2 28.448 -9.269 -6.566 1 61.75 ? S06 8SL 201 B 1 HETATM 16 C C07 8SL . . . B 2 33.232 -7.279 -6.766 1 41.3 ? C07 8SL 201 B 1 HETATM 17 C C08 8SL . . . B 2 33.485 -5.808 -7.29 1 44.1 ? C08 8SL 201 B 1 HETATM 18 C C09 8SL . . . B 2 32.453 -5.291 -8.2 1 37.6 ? C09 8SL 201 B 1 HETATM 19 C C11 8SL . . . B 2 30.713 -8.161 -4.934 1 42.88 ? C11 8SL 201 B 1 HETATM 20 C C12 8SL . . . B 2 31.631 -9.162 -4.212 1 41.4 ? C12 8SL 201 B 1 HETATM 21 C C14 8SL . . . B 2 32.154 -11.361 -3.536 1 39.96 ? C14 8SL 201 B 1 HETATM 22 C C16 8SL . . . B 2 33.604 -9.64 -2.951 1 40.33 ? C16 8SL 201 B 1 HETATM 23 C C18 8SL . . . B 2 27.853 -10.579 -7.595 1 42.26 ? C18 8SL 201 B 1 HETATM 24 C C19 8SL . . . B 2 26.943 -10.339 -8.742 1 38.91 ? C19 8SL 201 B 1 HETATM 25 C C23 8SL . . . B 2 24.884 -9.669 -9.712 1 34.85 ? C23 8SL 201 B 1 HETATM 26 O O25 8SL . . . B 2 24.536 -10.067 -12.207 1 37.33 ? O25 8SL 201 B 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #