data_5YER # _model_server_result.job_id RIOanmEDo4Il7AHDiK8Eng _model_server_result.datetime_utc '2025-03-06 09:42:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5yer # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":402}' # _entry.id 5YER # _exptl.entry_id 5YER _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 79.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'BROMIDE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5YER _cell.length_a 63.142 _cell.length_b 64.121 _cell.length_c 100.485 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YER _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'Br -1' _chem_comp.formula_weight 79.904 _chem_comp.id BR _chem_comp.mon_nstd_flag . _chem_comp.name 'BROMIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5YER _atom_sites.fract_transf_matrix[1][1] 0.015837 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015596 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009952 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BR A 1 401 303 BR BR . D 2 BR A 1 402 304 BR BR . E 3 SO4 A 1 403 305 SO4 SO4 . F 2 BR B 1 401 303 BR BR . G 2 BR B 1 402 304 BR BR . H 3 SO4 B 1 403 305 SO4 SO4 . I 4 HOH A 1 501 322 HOH HOH . I 4 HOH A 2 502 314 HOH HOH . I 4 HOH A 3 503 327 HOH HOH . I 4 HOH A 4 504 326 HOH HOH . I 4 HOH A 5 505 318 HOH HOH . I 4 HOH A 6 506 311 HOH HOH . I 4 HOH A 7 507 313 HOH HOH . I 4 HOH A 8 508 320 HOH HOH . I 4 HOH A 9 509 310 HOH HOH . I 4 HOH A 10 510 308 HOH HOH . I 4 HOH A 11 511 312 HOH HOH . I 4 HOH A 12 512 330 HOH HOH . I 4 HOH A 13 513 316 HOH HOH . I 4 HOH A 14 514 324 HOH HOH . I 4 HOH A 15 515 331 HOH HOH . I 4 HOH A 16 516 319 HOH HOH . I 4 HOH A 17 517 325 HOH HOH . I 4 HOH A 18 518 323 HOH HOH . I 4 HOH A 19 519 315 HOH HOH . I 4 HOH A 20 520 306 HOH HOH . I 4 HOH A 21 521 317 HOH HOH . I 4 HOH A 22 522 321 HOH HOH . I 4 HOH A 23 523 332 HOH HOH . I 4 HOH A 24 524 307 HOH HOH . I 4 HOH A 25 525 328 HOH HOH . I 4 HOH A 26 526 309 HOH HOH . I 4 HOH A 27 527 329 HOH HOH . J 4 HOH B 1 501 313 HOH HOH . J 4 HOH B 2 502 317 HOH HOH . J 4 HOH B 3 503 324 HOH HOH . J 4 HOH B 4 504 327 HOH HOH . J 4 HOH B 5 505 323 HOH HOH . J 4 HOH B 6 506 314 HOH HOH . J 4 HOH B 7 507 320 HOH HOH . J 4 HOH B 8 508 319 HOH HOH . J 4 HOH B 9 509 309 HOH HOH . J 4 HOH B 10 510 318 HOH HOH . J 4 HOH B 11 511 331 HOH HOH . J 4 HOH B 12 512 315 HOH HOH . J 4 HOH B 13 513 326 HOH HOH . J 4 HOH B 14 514 312 HOH HOH . J 4 HOH B 15 515 337 HOH HOH . J 4 HOH B 16 516 335 HOH HOH . J 4 HOH B 17 517 336 HOH HOH . J 4 HOH B 18 518 325 HOH HOH . J 4 HOH B 19 519 340 HOH HOH . J 4 HOH B 20 520 308 HOH HOH . J 4 HOH B 21 521 307 HOH HOH . J 4 HOH B 22 522 339 HOH HOH . J 4 HOH B 23 523 322 HOH HOH . J 4 HOH B 24 524 334 HOH HOH . J 4 HOH B 25 525 310 HOH HOH . J 4 HOH B 26 526 311 HOH HOH . J 4 HOH B 27 527 321 HOH HOH . J 4 HOH B 28 528 330 HOH HOH . J 4 HOH B 29 529 316 HOH HOH . J 4 HOH B 30 530 306 HOH HOH . J 4 HOH B 31 531 332 HOH HOH . J 4 HOH B 32 532 328 HOH HOH . J 4 HOH B 33 533 338 HOH HOH . J 4 HOH B 34 534 329 HOH HOH . J 4 HOH B 35 535 341 HOH HOH . J 4 HOH B 36 536 333 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol BR _atom_site.label_atom_id BR _atom_site.label_comp_id BR _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 2 _atom_site.Cartn_x -3.931 _atom_site.Cartn_y 36.333 _atom_site.Cartn_z 39.452 _atom_site.occupancy 0.67 _atom_site.B_iso_or_equiv 48.42 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id BR _atom_site.auth_comp_id BR _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #