data_5YGE
#
_model_server_result.job_id            9z1JMvlfG_RBy51fVYT3Jg 
_model_server_result.datetime_utc      '2024-10-28 02:22:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5yge 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    5YGE 
#
_exptl.entry_id    5YGE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              147.129 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'GLUTAMIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5YGE 
_cell.length_a            73.728 
_cell.length_b            73.728 
_cell.length_c            187.231 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5YGE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
_chem_comp.formula           'C5 H9 N O4' 
_chem_comp.formula_weight    147.129 
_chem_comp.id                GLU 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              'GLUTAMIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA GLU sing 204 n n 
N H GLU sing 205 n n 
N H2 GLU sing 206 n n 
CA C GLU sing 207 n n 
CA CB GLU sing 208 n n 
CA HA GLU sing 209 n n 
C O GLU doub 210 n n 
C OXT GLU sing 211 n n 
CB CG GLU sing 212 n n 
CB HB2 GLU sing 213 n n 
CB HB3 GLU sing 214 n n 
CG CD GLU sing 215 n n 
CG HG2 GLU sing 216 n n 
CG HG3 GLU sing 217 n n 
CD OE1 GLU doub 218 n n 
CD OE2 GLU sing 219 n n 
OE2 HE2 GLU sing 220 n n 
OXT HXT GLU sing 221 n n 
#
_atom_sites.entry_id                     5YGE 
_atom_sites.fract_transf_matrix[1][1]    0.013563 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013563 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005341 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ACO A 1 201 1 ACO ACO . 
D 3 GLU A 1 202 2 GLU GLU . 
E 4 CAD A 1 203 5 CAD CAD . 
F 4 CAD A 1 204 6 CAD CAD . 
G 2 ACO B 1 201 3 ACO ACO . 
H 3 GLU B 1 202 4 GLU GLU . 
I 4 CAD B 1 203 7 CAD CAD . 
J 4 CAD B 1 204 8 CAD CAD . 
K 5 HOH A 1 301 129 HOH HOH . 
K 5 HOH A 2 302 102 HOH HOH . 
K 5 HOH A 3 303 52 HOH HOH . 
K 5 HOH A 4 304 125 HOH HOH . 
K 5 HOH A 5 305 137 HOH HOH . 
K 5 HOH A 6 306 95 HOH HOH . 
K 5 HOH A 7 307 45 HOH HOH . 
K 5 HOH A 8 308 176 HOH HOH . 
K 5 HOH A 9 309 36 HOH HOH . 
K 5 HOH A 10 310 82 HOH HOH . 
K 5 HOH A 11 311 175 HOH HOH . 
K 5 HOH A 12 312 49 HOH HOH . 
K 5 HOH A 13 313 60 HOH HOH . 
K 5 HOH A 14 314 136 HOH HOH . 
K 5 HOH A 15 315 87 HOH HOH . 
K 5 HOH A 16 316 92 HOH HOH . 
K 5 HOH A 17 317 39 HOH HOH . 
K 5 HOH A 18 318 21 HOH HOH . 
K 5 HOH A 19 319 72 HOH HOH . 
K 5 HOH A 20 320 15 HOH HOH . 
K 5 HOH A 21 321 166 HOH HOH . 
K 5 HOH A 22 322 35 HOH HOH . 
K 5 HOH A 23 323 144 HOH HOH . 
K 5 HOH A 24 324 3 HOH HOH . 
K 5 HOH A 25 325 14 HOH HOH . 
K 5 HOH A 26 326 97 HOH HOH . 
K 5 HOH A 27 327 107 HOH HOH . 
K 5 HOH A 28 328 83 HOH HOH . 
K 5 HOH A 29 329 26 HOH HOH . 
K 5 HOH A 30 330 57 HOH HOH . 
K 5 HOH A 31 331 64 HOH HOH . 
K 5 HOH A 32 332 6 HOH HOH . 
K 5 HOH A 33 333 145 HOH HOH . 
K 5 HOH A 34 334 29 HOH HOH . 
K 5 HOH A 35 335 177 HOH HOH . 
K 5 HOH A 36 336 115 HOH HOH . 
K 5 HOH A 37 337 54 HOH HOH . 
K 5 HOH A 38 338 101 HOH HOH . 
K 5 HOH A 39 339 17 HOH HOH . 
K 5 HOH A 40 340 86 HOH HOH . 
K 5 HOH A 41 341 93 HOH HOH . 
K 5 HOH A 42 342 74 HOH HOH . 
K 5 HOH A 43 343 139 HOH HOH . 
K 5 HOH A 44 344 25 HOH HOH . 
K 5 HOH A 45 345 63 HOH HOH . 
K 5 HOH A 46 346 61 HOH HOH . 
K 5 HOH A 47 347 103 HOH HOH . 
K 5 HOH A 48 348 34 HOH HOH . 
K 5 HOH A 49 349 27 HOH HOH . 
K 5 HOH A 50 350 143 HOH HOH . 
K 5 HOH A 51 351 65 HOH HOH . 
K 5 HOH A 52 352 20 HOH HOH . 
K 5 HOH A 53 353 146 HOH HOH . 
K 5 HOH A 54 354 58 HOH HOH . 
K 5 HOH A 55 355 44 HOH HOH . 
K 5 HOH A 56 356 142 HOH HOH . 
K 5 HOH A 57 357 90 HOH HOH . 
K 5 HOH A 58 358 73 HOH HOH . 
K 5 HOH A 59 359 89 HOH HOH . 
K 5 HOH A 60 360 59 HOH HOH . 
K 5 HOH A 61 361 140 HOH HOH . 
K 5 HOH A 62 362 116 HOH HOH . 
K 5 HOH A 63 363 162 HOH HOH . 
K 5 HOH A 64 364 32 HOH HOH . 
K 5 HOH A 65 365 22 HOH HOH . 
K 5 HOH A 66 366 151 HOH HOH . 
K 5 HOH A 67 367 56 HOH HOH . 
K 5 HOH A 68 368 13 HOH HOH . 
K 5 HOH A 69 369 85 HOH HOH . 
K 5 HOH A 70 370 109 HOH HOH . 
K 5 HOH A 71 371 66 HOH HOH . 
K 5 HOH A 72 372 147 HOH HOH . 
K 5 HOH A 73 373 173 HOH HOH . 
K 5 HOH A 74 374 141 HOH HOH . 
K 5 HOH A 75 375 171 HOH HOH . 
K 5 HOH A 76 376 128 HOH HOH . 
K 5 HOH A 77 377 148 HOH HOH . 
K 5 HOH A 78 378 24 HOH HOH . 
K 5 HOH A 79 379 161 HOH HOH . 
L 5 HOH B 1 301 135 HOH HOH . 
L 5 HOH B 2 302 106 HOH HOH . 
L 5 HOH B 3 303 38 HOH HOH . 
L 5 HOH B 4 304 94 HOH HOH . 
L 5 HOH B 5 305 112 HOH HOH . 
L 5 HOH B 6 306 149 HOH HOH . 
L 5 HOH B 7 307 123 HOH HOH . 
L 5 HOH B 8 308 91 HOH HOH . 
L 5 HOH B 9 309 33 HOH HOH . 
L 5 HOH B 10 310 50 HOH HOH . 
L 5 HOH B 11 311 80 HOH HOH . 
L 5 HOH B 12 312 5 HOH HOH . 
L 5 HOH B 13 313 127 HOH HOH . 
L 5 HOH B 14 314 2 HOH HOH . 
L 5 HOH B 15 315 158 HOH HOH . 
L 5 HOH B 16 316 47 HOH HOH . 
L 5 HOH B 17 317 76 HOH HOH . 
L 5 HOH B 18 318 98 HOH HOH . 
L 5 HOH B 19 319 31 HOH HOH . 
L 5 HOH B 20 320 1 HOH HOH . 
L 5 HOH B 21 321 77 HOH HOH . 
L 5 HOH B 22 322 100 HOH HOH . 
L 5 HOH B 23 323 153 HOH HOH . 
L 5 HOH B 24 324 67 HOH HOH . 
L 5 HOH B 25 325 99 HOH HOH . 
L 5 HOH B 26 326 79 HOH HOH . 
L 5 HOH B 27 327 11 HOH HOH . 
L 5 HOH B 28 328 42 HOH HOH . 
L 5 HOH B 29 329 37 HOH HOH . 
L 5 HOH B 30 330 7 HOH HOH . 
L 5 HOH B 31 331 159 HOH HOH . 
L 5 HOH B 32 332 170 HOH HOH . 
L 5 HOH B 33 333 134 HOH HOH . 
L 5 HOH B 34 334 78 HOH HOH . 
L 5 HOH B 35 335 41 HOH HOH . 
L 5 HOH B 36 336 18 HOH HOH . 
L 5 HOH B 37 337 48 HOH HOH . 
L 5 HOH B 38 338 4 HOH HOH . 
L 5 HOH B 39 339 114 HOH HOH . 
L 5 HOH B 40 340 9 HOH HOH . 
L 5 HOH B 41 341 46 HOH HOH . 
L 5 HOH B 42 342 130 HOH HOH . 
L 5 HOH B 43 343 62 HOH HOH . 
L 5 HOH B 44 344 68 HOH HOH . 
L 5 HOH B 45 345 53 HOH HOH . 
L 5 HOH B 46 346 156 HOH HOH . 
L 5 HOH B 47 347 118 HOH HOH . 
L 5 HOH B 48 348 40 HOH HOH . 
L 5 HOH B 49 349 51 HOH HOH . 
L 5 HOH B 50 350 30 HOH HOH . 
L 5 HOH B 51 351 117 HOH HOH . 
L 5 HOH B 52 352 131 HOH HOH . 
L 5 HOH B 53 353 108 HOH HOH . 
L 5 HOH B 54 354 169 HOH HOH . 
L 5 HOH B 55 355 28 HOH HOH . 
L 5 HOH B 56 356 23 HOH HOH . 
L 5 HOH B 57 357 88 HOH HOH . 
L 5 HOH B 58 358 96 HOH HOH . 
L 5 HOH B 59 359 110 HOH HOH . 
L 5 HOH B 60 360 12 HOH HOH . 
L 5 HOH B 61 361 105 HOH HOH . 
L 5 HOH B 62 362 16 HOH HOH . 
L 5 HOH B 63 363 126 HOH HOH . 
L 5 HOH B 64 364 160 HOH HOH . 
L 5 HOH B 65 365 154 HOH HOH . 
L 5 HOH B 66 366 111 HOH HOH . 
L 5 HOH B 67 367 178 HOH HOH . 
L 5 HOH B 68 368 10 HOH HOH . 
L 5 HOH B 69 369 8 HOH HOH . 
L 5 HOH B 70 370 122 HOH HOH . 
L 5 HOH B 71 371 75 HOH HOH . 
L 5 HOH B 72 372 55 HOH HOH . 
L 5 HOH B 73 373 84 HOH HOH . 
L 5 HOH B 74 374 121 HOH HOH . 
L 5 HOH B 75 375 164 HOH HOH . 
L 5 HOH B 76 376 71 HOH HOH . 
L 5 HOH B 77 377 152 HOH HOH . 
L 5 HOH B 78 378 172 HOH HOH . 
L 5 HOH B 79 379 113 HOH HOH . 
L 5 HOH B 80 380 104 HOH HOH . 
L 5 HOH B 81 381 119 HOH HOH . 
L 5 HOH B 82 382 19 HOH HOH . 
L 5 HOH B 83 383 81 HOH HOH . 
L 5 HOH B 84 384 168 HOH HOH . 
L 5 HOH B 85 385 120 HOH HOH . 
L 5 HOH B 86 386 150 HOH HOH . 
L 5 HOH B 87 387 70 HOH HOH . 
L 5 HOH B 88 388 163 HOH HOH . 
L 5 HOH B 89 389 43 HOH HOH . 
L 5 HOH B 90 390 157 HOH HOH . 
L 5 HOH B 91 391 69 HOH HOH . 
L 5 HOH B 92 392 133 HOH HOH . 
L 5 HOH B 93 393 124 HOH HOH . 
L 5 HOH B 94 394 174 HOH HOH . 
L 5 HOH B 95 395 155 HOH HOH . 
L 5 HOH B 96 396 167 HOH HOH . 
L 5 HOH B 97 397 165 HOH HOH . 
L 5 HOH B 98 398 132 HOH HOH . 
L 5 HOH B 99 399 138 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N GLU . . . D 3 -16.571 16.896 -7.647 1 53.88 ? N GLU 202 A 1 
HETATM 2 C CA GLU . . . D 3 -16.962 17.767 -8.738 1 66.12 ? CA GLU 202 A 1 
HETATM 3 C C GLU . . . D 3 -18.337 18.403 -8.566 1 60.88 ? C GLU 202 A 1 
HETATM 4 O O GLU . . . D 3 -19.131 18.295 -9.555 1 62.95 ? O GLU 202 A 1 
HETATM 5 C CB GLU . . . D 3 -16.869 17.035 -10.055 1 77.36 ? CB GLU 202 A 1 
HETATM 6 C CG GLU . . . D 3 -15.492 16.454 -10.364 1 80.99 ? CG GLU 202 A 1 
HETATM 7 C CD GLU . . . D 3 -15.436 15.719 -11.69 1 84.05 ? CD GLU 202 A 1 
HETATM 8 O OE1 GLU . . . D 3 -15.185 16.366 -12.732 1 84.3 ? OE1 GLU 202 A 1 
HETATM 9 O OE2 GLU . . . D 3 -15.622 14.491 -11.69 1 83.34 ? OE2 GLU 202 A 1 
HETATM 10 O OXT GLU . . . D 3 -18.558 19.018 -7.483 1 48.09 ? OXT GLU 202 A 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#