data_5YMX # _model_server_result.job_id xxhz2ItY6eZzJx6gfj8Zfg _model_server_result.datetime_utc '2024-11-22 10:10:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ymx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 5YMX # _exptl.entry_id 5YMX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5YMX _cell.length_a 67.34 _cell.length_b 68.61 _cell.length_c 89.42 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YMX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 92 n n PB O2B GDP sing 93 n n PB O3B GDP sing 94 n n PB O3A GDP sing 95 n n O2B HOB2 GDP sing 96 n n O3B HOB3 GDP sing 97 n n O3A PA GDP sing 98 n n PA O1A GDP doub 99 n n PA O2A GDP sing 100 n n PA O5' GDP sing 101 n n O2A HOA2 GDP sing 102 n n O5' C5' GDP sing 103 n n C5' C4' GDP sing 104 n n C5' H5' GDP sing 105 n n C5' "H5''" GDP sing 106 n n C4' O4' GDP sing 107 n n C4' C3' GDP sing 108 n n C4' H4' GDP sing 109 n n O4' C1' GDP sing 110 n n C3' O3' GDP sing 111 n n C3' C2' GDP sing 112 n n C3' H3' GDP sing 113 n n O3' HO3' GDP sing 114 n n C2' O2' GDP sing 115 n n C2' C1' GDP sing 116 n n C2' H2' GDP sing 117 n n O2' HO2' GDP sing 118 n n C1' N9 GDP sing 119 n n C1' H1' GDP sing 120 n n N9 C8 GDP sing 121 n y N9 C4 GDP sing 122 n y C8 N7 GDP doub 123 n y C8 H8 GDP sing 124 n n N7 C5 GDP sing 125 n y C5 C6 GDP sing 126 n n C5 C4 GDP doub 127 n y C6 O6 GDP doub 128 n n C6 N1 GDP sing 129 n n N1 C2 GDP sing 130 n n N1 HN1 GDP sing 131 n n C2 N2 GDP sing 132 n n C2 N3 GDP doub 133 n n N2 HN21 GDP sing 134 n n N2 HN22 GDP sing 135 n n N3 C4 GDP sing 136 n n # _atom_sites.entry_id 5YMX _atom_sites.fract_transf_matrix[1][1] 0.01485 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014575 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011183 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GDP A 1 301 274 GDP GDP . D 3 IMD A 1 302 1 IMD IMD . E 4 EDO A 1 303 3 EDO EDO . F 5 MPD A 1 304 5 MPD MPD . G 2 GDP B 1 301 274 GDP GDP . H 3 IMD B 1 302 2 IMD IMD . I 4 EDO B 1 303 4 EDO EDO . J 6 HOH A 1 401 284 HOH HOH . J 6 HOH A 2 402 301 HOH HOH . J 6 HOH A 3 403 190 HOH HOH . J 6 HOH A 4 404 314 HOH HOH . J 6 HOH A 5 405 206 HOH HOH . J 6 HOH A 6 406 333 HOH HOH . J 6 HOH A 7 407 168 HOH HOH . J 6 HOH A 8 408 275 HOH HOH . J 6 HOH A 9 409 123 HOH HOH . J 6 HOH A 10 410 290 HOH HOH . J 6 HOH A 11 411 200 HOH HOH . J 6 HOH A 12 412 146 HOH HOH . J 6 HOH A 13 413 91 HOH HOH . J 6 HOH A 14 414 181 HOH HOH . J 6 HOH A 15 415 408 HOH HOH . J 6 HOH A 16 416 361 HOH HOH . J 6 HOH A 17 417 17 HOH HOH . J 6 HOH A 18 418 87 HOH HOH . J 6 HOH A 19 419 170 HOH HOH . J 6 HOH A 20 420 151 HOH HOH . J 6 HOH A 21 421 101 HOH HOH . J 6 HOH A 22 422 16 HOH HOH . J 6 HOH A 23 423 285 HOH HOH . J 6 HOH A 24 424 43 HOH HOH . J 6 HOH A 25 425 197 HOH HOH . J 6 HOH A 26 426 117 HOH HOH . J 6 HOH A 27 427 30 HOH HOH . J 6 HOH A 28 428 133 HOH HOH . J 6 HOH A 29 429 92 HOH HOH . J 6 HOH A 30 430 1 HOH HOH . J 6 HOH A 31 431 20 HOH HOH . J 6 HOH A 32 432 104 HOH HOH . J 6 HOH A 33 433 103 HOH HOH . J 6 HOH A 34 434 90 HOH HOH . J 6 HOH A 35 435 213 HOH HOH . J 6 HOH A 36 436 356 HOH HOH . J 6 HOH A 37 437 48 HOH HOH . J 6 HOH A 38 438 177 HOH HOH . J 6 HOH A 39 439 21 HOH HOH . J 6 HOH A 40 440 46 HOH HOH . J 6 HOH A 41 441 312 HOH HOH . J 6 HOH A 42 442 86 HOH HOH . J 6 HOH A 43 443 26 HOH HOH . J 6 HOH A 44 444 384 HOH HOH . J 6 HOH A 45 445 24 HOH HOH . J 6 HOH A 46 446 157 HOH HOH . J 6 HOH A 47 447 6 HOH HOH . J 6 HOH A 48 448 71 HOH HOH . J 6 HOH A 49 449 201 HOH HOH . J 6 HOH A 50 450 220 HOH HOH . J 6 HOH A 51 451 230 HOH HOH . J 6 HOH A 52 452 76 HOH HOH . J 6 HOH A 53 453 223 HOH HOH . J 6 HOH A 54 454 202 HOH HOH . J 6 HOH A 55 455 27 HOH HOH . J 6 HOH A 56 456 60 HOH HOH . J 6 HOH A 57 457 214 HOH HOH . J 6 HOH A 58 458 28 HOH HOH . J 6 HOH A 59 459 22 HOH HOH . J 6 HOH A 60 460 56 HOH HOH . J 6 HOH A 61 461 98 HOH HOH . J 6 HOH A 62 462 357 HOH HOH . J 6 HOH A 63 463 12 HOH HOH . J 6 HOH A 64 464 2 HOH HOH . J 6 HOH A 65 465 148 HOH HOH . J 6 HOH A 66 466 227 HOH HOH . J 6 HOH A 67 467 113 HOH HOH . J 6 HOH A 68 468 83 HOH HOH . J 6 HOH A 69 469 39 HOH HOH . J 6 HOH A 70 470 158 HOH HOH . J 6 HOH A 71 471 57 HOH HOH . J 6 HOH A 72 472 112 HOH HOH . J 6 HOH A 73 473 40 HOH HOH . J 6 HOH A 74 474 192 HOH HOH . J 6 HOH A 75 475 264 HOH HOH . J 6 HOH A 76 476 134 HOH HOH . J 6 HOH A 77 477 53 HOH HOH . J 6 HOH A 78 478 150 HOH HOH . J 6 HOH A 79 479 34 HOH HOH . J 6 HOH A 80 480 155 HOH HOH . J 6 HOH A 81 481 373 HOH HOH . J 6 HOH A 82 482 52 HOH HOH . J 6 HOH A 83 483 119 HOH HOH . J 6 HOH A 84 484 50 HOH HOH . J 6 HOH A 85 485 110 HOH HOH . J 6 HOH A 86 486 291 HOH HOH . J 6 HOH A 87 487 14 HOH HOH . J 6 HOH A 88 488 89 HOH HOH . J 6 HOH A 89 489 366 HOH HOH . J 6 HOH A 90 490 153 HOH HOH . J 6 HOH A 91 491 49 HOH HOH . J 6 HOH A 92 492 45 HOH HOH . J 6 HOH A 93 493 35 HOH HOH . J 6 HOH A 94 494 108 HOH HOH . J 6 HOH A 95 495 58 HOH HOH . J 6 HOH A 96 496 186 HOH HOH . J 6 HOH A 97 497 421 HOH HOH . J 6 HOH A 98 498 152 HOH HOH . J 6 HOH A 99 499 120 HOH HOH . J 6 HOH A 100 500 171 HOH HOH . J 6 HOH A 101 501 10 HOH HOH . J 6 HOH A 102 502 94 HOH HOH . J 6 HOH A 103 503 79 HOH HOH . J 6 HOH A 104 504 75 HOH HOH . J 6 HOH A 105 505 165 HOH HOH . J 6 HOH A 106 506 392 HOH HOH . J 6 HOH A 107 507 47 HOH HOH . J 6 HOH A 108 508 276 HOH HOH . J 6 HOH A 109 509 136 HOH HOH . J 6 HOH A 110 510 122 HOH HOH . J 6 HOH A 111 511 221 HOH HOH . J 6 HOH A 112 512 81 HOH HOH . J 6 HOH A 113 513 66 HOH HOH . J 6 HOH A 114 514 358 HOH HOH . J 6 HOH A 115 515 406 HOH HOH . J 6 HOH A 116 516 129 HOH HOH . J 6 HOH A 117 517 44 HOH HOH . J 6 HOH A 118 518 3 HOH HOH . J 6 HOH A 119 519 417 HOH HOH . J 6 HOH A 120 520 36 HOH HOH . J 6 HOH A 121 521 144 HOH HOH . J 6 HOH A 122 522 139 HOH HOH . J 6 HOH A 123 523 74 HOH HOH . J 6 HOH A 124 524 242 HOH HOH . J 6 HOH A 125 525 409 HOH HOH . J 6 HOH A 126 526 321 HOH HOH . J 6 HOH A 127 527 390 HOH HOH . J 6 HOH A 128 528 228 HOH HOH . J 6 HOH A 129 529 132 HOH HOH . J 6 HOH A 130 530 69 HOH HOH . J 6 HOH A 131 531 95 HOH HOH . J 6 HOH A 132 532 145 HOH HOH . J 6 HOH A 133 533 322 HOH HOH . J 6 HOH A 134 534 96 HOH HOH . J 6 HOH A 135 535 163 HOH HOH . J 6 HOH A 136 536 352 HOH HOH . J 6 HOH A 137 537 124 HOH HOH . J 6 HOH A 138 538 278 HOH HOH . J 6 HOH A 139 539 164 HOH HOH . J 6 HOH A 140 540 218 HOH HOH . J 6 HOH A 141 541 178 HOH HOH . J 6 HOH A 142 542 130 HOH HOH . J 6 HOH A 143 543 255 HOH HOH . J 6 HOH A 144 544 143 HOH HOH . J 6 HOH A 145 545 297 HOH HOH . J 6 HOH A 146 546 335 HOH HOH . J 6 HOH A 147 547 114 HOH HOH . J 6 HOH A 148 548 383 HOH HOH . J 6 HOH A 149 549 354 HOH HOH . J 6 HOH A 150 550 93 HOH HOH . J 6 HOH A 151 551 215 HOH HOH . J 6 HOH A 152 552 300 HOH HOH . J 6 HOH A 153 553 263 HOH HOH . J 6 HOH A 154 554 62 HOH HOH . J 6 HOH A 155 555 244 HOH HOH . J 6 HOH A 156 556 368 HOH HOH . J 6 HOH A 157 557 175 HOH HOH . J 6 HOH A 158 558 65 HOH HOH . J 6 HOH A 159 559 234 HOH HOH . J 6 HOH A 160 560 33 HOH HOH . J 6 HOH A 161 561 161 HOH HOH . J 6 HOH A 162 562 381 HOH HOH . J 6 HOH A 163 563 160 HOH HOH . J 6 HOH A 164 564 281 HOH HOH . J 6 HOH A 165 565 156 HOH HOH . J 6 HOH A 166 566 389 HOH HOH . J 6 HOH A 167 567 350 HOH HOH . J 6 HOH A 168 568 338 HOH HOH . J 6 HOH A 169 569 371 HOH HOH . J 6 HOH A 170 570 289 HOH HOH . J 6 HOH A 171 571 382 HOH HOH . J 6 HOH A 172 572 420 HOH HOH . J 6 HOH A 173 573 415 HOH HOH . J 6 HOH A 174 574 268 HOH HOH . J 6 HOH A 175 575 369 HOH HOH . J 6 HOH A 176 576 379 HOH HOH . J 6 HOH A 177 577 185 HOH HOH . J 6 HOH A 178 578 266 HOH HOH . J 6 HOH A 179 579 283 HOH HOH . J 6 HOH A 180 580 360 HOH HOH . J 6 HOH A 181 581 32 HOH HOH . J 6 HOH A 182 582 274 HOH HOH . J 6 HOH A 183 583 54 HOH HOH . J 6 HOH A 184 584 299 HOH HOH . J 6 HOH A 185 585 254 HOH HOH . J 6 HOH A 186 586 286 HOH HOH . J 6 HOH A 187 587 267 HOH HOH . J 6 HOH A 188 588 370 HOH HOH . J 6 HOH A 189 589 135 HOH HOH . J 6 HOH A 190 590 205 HOH HOH . J 6 HOH A 191 591 313 HOH HOH . J 6 HOH A 192 592 180 HOH HOH . J 6 HOH A 193 593 270 HOH HOH . J 6 HOH A 194 594 364 HOH HOH . J 6 HOH A 195 595 207 HOH HOH . J 6 HOH A 196 596 198 HOH HOH . J 6 HOH A 197 597 147 HOH HOH . J 6 HOH A 198 598 204 HOH HOH . J 6 HOH A 199 599 189 HOH HOH . J 6 HOH A 200 600 336 HOH HOH . J 6 HOH A 201 601 265 HOH HOH . J 6 HOH A 202 602 279 HOH HOH . J 6 HOH A 203 603 224 HOH HOH . J 6 HOH A 204 604 334 HOH HOH . J 6 HOH A 205 605 272 HOH HOH . J 6 HOH A 206 606 393 HOH HOH . J 6 HOH A 207 607 362 HOH HOH . J 6 HOH A 208 608 416 HOH HOH . J 6 HOH A 209 609 349 HOH HOH . J 6 HOH A 210 610 239 HOH HOH . J 6 HOH A 211 611 363 HOH HOH . J 6 HOH A 212 612 105 HOH HOH . J 6 HOH A 213 613 159 HOH HOH . J 6 HOH A 214 614 245 HOH HOH . J 6 HOH A 215 615 282 HOH HOH . J 6 HOH A 216 616 183 HOH HOH . J 6 HOH A 217 617 269 HOH HOH . J 6 HOH A 218 618 341 HOH HOH . J 6 HOH A 219 619 288 HOH HOH . J 6 HOH A 220 620 377 HOH HOH . J 6 HOH A 221 621 247 HOH HOH . J 6 HOH A 222 622 252 HOH HOH . J 6 HOH A 223 623 271 HOH HOH . J 6 HOH A 224 624 121 HOH HOH . J 6 HOH A 225 625 194 HOH HOH . J 6 HOH A 226 626 419 HOH HOH . J 6 HOH A 227 627 298 HOH HOH . J 6 HOH A 228 628 418 HOH HOH . J 6 HOH A 229 629 249 HOH HOH . J 6 HOH A 230 630 302 HOH HOH . J 6 HOH A 231 631 235 HOH HOH . J 6 HOH A 232 632 344 HOH HOH . J 6 HOH A 233 633 386 HOH HOH . J 6 HOH A 234 634 355 HOH HOH . J 6 HOH A 235 635 359 HOH HOH . J 6 HOH A 236 636 292 HOH HOH . J 6 HOH A 237 637 365 HOH HOH . J 6 HOH A 238 638 287 HOH HOH . J 6 HOH A 239 639 262 HOH HOH . J 6 HOH A 240 640 209 HOH HOH . J 6 HOH A 241 641 394 HOH HOH . J 6 HOH A 242 642 232 HOH HOH . J 6 HOH A 243 643 296 HOH HOH . J 6 HOH A 244 644 331 HOH HOH . J 6 HOH A 245 645 353 HOH HOH . J 6 HOH A 246 646 238 HOH HOH . J 6 HOH A 247 647 367 HOH HOH . J 6 HOH A 248 648 246 HOH HOH . J 6 HOH A 249 649 343 HOH HOH . J 6 HOH A 250 650 407 HOH HOH . J 6 HOH A 251 651 385 HOH HOH . J 6 HOH A 252 652 294 HOH HOH . J 6 HOH A 253 653 337 HOH HOH . J 6 HOH A 254 654 277 HOH HOH . J 6 HOH A 255 655 293 HOH HOH . J 6 HOH A 256 656 387 HOH HOH . J 6 HOH A 257 657 351 HOH HOH . J 6 HOH A 258 658 273 HOH HOH . J 6 HOH A 259 659 280 HOH HOH . J 6 HOH A 260 660 295 HOH HOH . J 6 HOH A 261 661 388 HOH HOH . K 6 HOH B 1 401 260 HOH HOH . K 6 HOH B 2 402 372 HOH HOH . K 6 HOH B 3 403 305 HOH HOH . K 6 HOH B 4 404 251 HOH HOH . K 6 HOH B 5 405 126 HOH HOH . K 6 HOH B 6 406 187 HOH HOH . K 6 HOH B 7 407 78 HOH HOH . K 6 HOH B 8 408 99 HOH HOH . K 6 HOH B 9 409 191 HOH HOH . K 6 HOH B 10 410 73 HOH HOH . K 6 HOH B 11 411 107 HOH HOH . K 6 HOH B 12 412 55 HOH HOH . K 6 HOH B 13 413 64 HOH HOH . K 6 HOH B 14 414 231 HOH HOH . K 6 HOH B 15 415 38 HOH HOH . K 6 HOH B 16 416 5 HOH HOH . K 6 HOH B 17 417 18 HOH HOH . K 6 HOH B 18 418 250 HOH HOH . K 6 HOH B 19 419 210 HOH HOH . K 6 HOH B 20 420 15 HOH HOH . K 6 HOH B 21 421 211 HOH HOH . K 6 HOH B 22 422 85 HOH HOH . K 6 HOH B 23 423 253 HOH HOH . K 6 HOH B 24 424 125 HOH HOH . K 6 HOH B 25 425 328 HOH HOH . K 6 HOH B 26 426 77 HOH HOH . K 6 HOH B 27 427 131 HOH HOH . K 6 HOH B 28 428 128 HOH HOH . K 6 HOH B 29 429 138 HOH HOH . K 6 HOH B 30 430 9 HOH HOH . K 6 HOH B 31 431 80 HOH HOH . K 6 HOH B 32 432 173 HOH HOH . K 6 HOH B 33 433 23 HOH HOH . K 6 HOH B 34 434 378 HOH HOH . K 6 HOH B 35 435 111 HOH HOH . K 6 HOH B 36 436 13 HOH HOH . K 6 HOH B 37 437 7 HOH HOH . K 6 HOH B 38 438 100 HOH HOH . K 6 HOH B 39 439 4 HOH HOH . K 6 HOH B 40 440 166 HOH HOH . K 6 HOH B 41 441 88 HOH HOH . K 6 HOH B 42 442 179 HOH HOH . K 6 HOH B 43 443 219 HOH HOH . K 6 HOH B 44 444 59 HOH HOH . K 6 HOH B 45 445 137 HOH HOH . K 6 HOH B 46 446 19 HOH HOH . K 6 HOH B 47 447 72 HOH HOH . K 6 HOH B 48 448 182 HOH HOH . K 6 HOH B 49 449 311 HOH HOH . K 6 HOH B 50 450 41 HOH HOH . K 6 HOH B 51 451 118 HOH HOH . K 6 HOH B 52 452 29 HOH HOH . K 6 HOH B 53 453 257 HOH HOH . K 6 HOH B 54 454 414 HOH HOH . K 6 HOH B 55 455 63 HOH HOH . K 6 HOH B 56 456 67 HOH HOH . K 6 HOH B 57 457 42 HOH HOH . K 6 HOH B 58 458 82 HOH HOH . K 6 HOH B 59 459 37 HOH HOH . K 6 HOH B 60 460 51 HOH HOH . K 6 HOH B 61 461 97 HOH HOH . K 6 HOH B 62 462 149 HOH HOH . K 6 HOH B 63 463 169 HOH HOH . K 6 HOH B 64 464 109 HOH HOH . K 6 HOH B 65 465 162 HOH HOH . K 6 HOH B 66 466 188 HOH HOH . K 6 HOH B 67 467 222 HOH HOH . K 6 HOH B 68 468 167 HOH HOH . K 6 HOH B 69 469 25 HOH HOH . K 6 HOH B 70 470 320 HOH HOH . K 6 HOH B 71 471 315 HOH HOH . K 6 HOH B 72 472 326 HOH HOH . K 6 HOH B 73 473 11 HOH HOH . K 6 HOH B 74 474 398 HOH HOH . K 6 HOH B 75 475 323 HOH HOH . K 6 HOH B 76 476 203 HOH HOH . K 6 HOH B 77 477 116 HOH HOH . K 6 HOH B 78 478 84 HOH HOH . K 6 HOH B 79 479 243 HOH HOH . K 6 HOH B 80 480 258 HOH HOH . K 6 HOH B 81 481 176 HOH HOH . K 6 HOH B 82 482 70 HOH HOH . K 6 HOH B 83 483 195 HOH HOH . K 6 HOH B 84 484 68 HOH HOH . K 6 HOH B 85 485 127 HOH HOH . K 6 HOH B 86 486 208 HOH HOH . K 6 HOH B 87 487 193 HOH HOH . K 6 HOH B 88 488 310 HOH HOH . K 6 HOH B 89 489 140 HOH HOH . K 6 HOH B 90 490 229 HOH HOH . K 6 HOH B 91 491 217 HOH HOH . K 6 HOH B 92 492 184 HOH HOH . K 6 HOH B 93 493 142 HOH HOH . K 6 HOH B 94 494 115 HOH HOH . K 6 HOH B 95 495 410 HOH HOH . K 6 HOH B 96 496 154 HOH HOH . K 6 HOH B 97 497 141 HOH HOH . K 6 HOH B 98 498 318 HOH HOH . K 6 HOH B 99 499 226 HOH HOH . K 6 HOH B 100 500 339 HOH HOH . K 6 HOH B 101 501 237 HOH HOH . K 6 HOH B 102 502 8 HOH HOH . K 6 HOH B 103 503 196 HOH HOH . K 6 HOH B 104 504 395 HOH HOH . K 6 HOH B 105 505 225 HOH HOH . K 6 HOH B 106 506 102 HOH HOH . K 6 HOH B 107 507 401 HOH HOH . K 6 HOH B 108 508 31 HOH HOH . K 6 HOH B 109 509 319 HOH HOH . K 6 HOH B 110 510 347 HOH HOH . K 6 HOH B 111 511 256 HOH HOH . K 6 HOH B 112 512 306 HOH HOH . K 6 HOH B 113 513 212 HOH HOH . K 6 HOH B 114 514 309 HOH HOH . K 6 HOH B 115 515 307 HOH HOH . K 6 HOH B 116 516 340 HOH HOH . K 6 HOH B 117 517 376 HOH HOH . K 6 HOH B 118 518 172 HOH HOH . K 6 HOH B 119 519 345 HOH HOH . K 6 HOH B 120 520 259 HOH HOH . K 6 HOH B 121 521 216 HOH HOH . K 6 HOH B 122 522 374 HOH HOH . K 6 HOH B 123 523 330 HOH HOH . K 6 HOH B 124 524 325 HOH HOH . K 6 HOH B 125 525 308 HOH HOH . K 6 HOH B 126 526 342 HOH HOH . K 6 HOH B 127 527 380 HOH HOH . K 6 HOH B 128 528 403 HOH HOH . K 6 HOH B 129 529 396 HOH HOH . K 6 HOH B 130 530 397 HOH HOH . K 6 HOH B 131 531 61 HOH HOH . K 6 HOH B 132 532 332 HOH HOH . K 6 HOH B 133 533 236 HOH HOH . K 6 HOH B 134 534 240 HOH HOH . K 6 HOH B 135 535 303 HOH HOH . K 6 HOH B 136 536 248 HOH HOH . K 6 HOH B 137 537 261 HOH HOH . K 6 HOH B 138 538 304 HOH HOH . K 6 HOH B 139 539 174 HOH HOH . K 6 HOH B 140 540 375 HOH HOH . K 6 HOH B 141 541 348 HOH HOH . K 6 HOH B 142 542 316 HOH HOH . K 6 HOH B 143 543 233 HOH HOH . K 6 HOH B 144 544 399 HOH HOH . K 6 HOH B 145 545 413 HOH HOH . K 6 HOH B 146 546 391 HOH HOH . K 6 HOH B 147 547 402 HOH HOH . K 6 HOH B 148 548 411 HOH HOH . K 6 HOH B 149 549 346 HOH HOH . K 6 HOH B 150 550 199 HOH HOH . K 6 HOH B 151 551 329 HOH HOH . K 6 HOH B 152 552 423 HOH HOH . K 6 HOH B 153 553 317 HOH HOH . K 6 HOH B 154 554 412 HOH HOH . K 6 HOH B 155 555 422 HOH HOH . K 6 HOH B 156 556 241 HOH HOH . K 6 HOH B 157 557 106 HOH HOH . K 6 HOH B 158 558 327 HOH HOH . K 6 HOH B 159 559 324 HOH HOH . K 6 HOH B 160 560 424 HOH HOH . K 6 HOH B 161 561 400 HOH HOH . K 6 HOH B 162 562 404 HOH HOH . K 6 HOH B 163 563 405 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . G 2 0.012 43.061 17.434 1 18 ? PB GDP 301 B 1 HETATM 2 O O1B GDP . . . G 2 0.905 43.314 16.243 1 19.74 ? O1B GDP 301 B 1 HETATM 3 O O2B GDP . . . G 2 -0.923 41.886 17.177 1 18.61 ? O2B GDP 301 B 1 HETATM 4 O O3B GDP . . . G 2 -0.711 44.289 17.913 1 17.41 ? O3B GDP 301 B 1 HETATM 5 O O3A GDP . . . G 2 1.036 42.524 18.591 1 17.86 ? O3A GDP 301 B 1 HETATM 6 P PA GDP . . . G 2 1.237 43.017 20.125 1 19.97 ? PA GDP 301 B 1 HETATM 7 O O1A GDP . . . G 2 1.759 44.432 20.176 1 19.84 ? O1A GDP 301 B 1 HETATM 8 O O2A GDP . . . G 2 -0.01 42.722 20.92 1 20.58 ? O2A GDP 301 B 1 HETATM 9 O O5' GDP . . . G 2 2.445 42.074 20.579 1 19.79 ? O5' GDP 301 B 1 HETATM 10 C C5' GDP . . . G 2 2.22 40.664 20.683 1 21.18 ? C5' GDP 301 B 1 HETATM 11 C C4' GDP . . . G 2 3.081 40.061 21.791 1 22.29 ? C4' GDP 301 B 1 HETATM 12 O O4' GDP . . . G 2 4.472 40.253 21.517 1 23.55 ? O4' GDP 301 B 1 HETATM 13 C C3' GDP . . . G 2 2.821 40.721 23.136 1 24 ? C3' GDP 301 B 1 HETATM 14 O O3' GDP . . . G 2 2.896 39.712 24.154 1 25.43 ? O3' GDP 301 B 1 HETATM 15 C C2' GDP . . . G 2 3.967 41.699 23.292 1 24.72 ? C2' GDP 301 B 1 HETATM 16 O O2' GDP . . . G 2 4.29 41.979 24.662 1 27.29 ? O2' GDP 301 B 1 HETATM 17 C C1' GDP . . . G 2 5.086 40.953 22.597 1 24.21 ? C1' GDP 301 B 1 HETATM 18 N N9 GDP . . . G 2 6.066 41.881 22.014 1 23.82 ? N9 GDP 301 B 1 HETATM 19 C C8 GDP . . . G 2 5.828 42.931 21.202 1 24.71 ? C8 GDP 301 B 1 HETATM 20 N N7 GDP . . . G 2 6.997 43.532 20.854 1 25.09 ? N7 GDP 301 B 1 HETATM 21 C C5 GDP . . . G 2 7.998 42.842 21.437 1 25.27 ? C5 GDP 301 B 1 HETATM 22 C C6 GDP . . . G 2 9.474 42.928 21.493 1 25.41 ? C6 GDP 301 B 1 HETATM 23 O O6 GDP . . . G 2 10.09 43.82 20.879 1 25.12 ? O6 GDP 301 B 1 HETATM 24 N N1 GDP . . . G 2 10.126 42.011 22.221 1 26.27 ? N1 GDP 301 B 1 HETATM 25 C C2 GDP . . . G 2 9.489 41.031 22.888 1 27.99 ? C2 GDP 301 B 1 HETATM 26 N N2 GDP . . . G 2 10.225 40.155 23.599 1 29.13 ? N2 GDP 301 B 1 HETATM 27 N N3 GDP . . . G 2 8.143 40.893 22.891 1 27.35 ? N3 GDP 301 B 1 HETATM 28 C C4 GDP . . . G 2 7.373 41.754 22.189 1 25.48 ? C4 GDP 301 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 28 #