data_5YO3
#
_model_server_result.job_id            nUrquMpfkv4-zQL8EwwvmA 
_model_server_result.datetime_utc      '2024-12-25 14:02:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5yo3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":204}' 
#
_entry.id    5YO3 
#
_exptl.entry_id    5YO3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5YO3 
_cell.length_a            40.328 
_cell.length_b            50.126 
_cell.length_c            94.237 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5YO3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             17 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              16 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             30 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              29 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.031 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 290 n n 
S O2 SO4 doub 291 n n 
S O3 SO4 sing 292 n n 
S O4 SO4 sing 293 n n 
#
_atom_sites.entry_id                     5YO3 
_atom_sites.fract_transf_matrix[1][1]    0.024797 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01995 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010612 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 201 1 SO4 SO4 . 
C 2 SO4 A 1 202 2 SO4 SO4 . 
D 2 SO4 A 1 203 3 SO4 SO4 . 
E 2 SO4 A 1 204 4 SO4 SO4 . 
F 3 HOH A 1 301 165 HOH HOH . 
F 3 HOH A 2 302 162 HOH HOH . 
F 3 HOH A 3 303 94 HOH HOH . 
F 3 HOH A 4 304 112 HOH HOH . 
F 3 HOH A 5 305 114 HOH HOH . 
F 3 HOH A 6 306 123 HOH HOH . 
F 3 HOH A 7 307 60 HOH HOH . 
F 3 HOH A 8 308 125 HOH HOH . 
F 3 HOH A 9 309 88 HOH HOH . 
F 3 HOH A 10 310 191 HOH HOH . 
F 3 HOH A 11 311 192 HOH HOH . 
F 3 HOH A 12 312 80 HOH HOH . 
F 3 HOH A 13 313 104 HOH HOH . 
F 3 HOH A 14 314 164 HOH HOH . 
F 3 HOH A 15 315 36 HOH HOH . 
F 3 HOH A 16 316 24 HOH HOH . 
F 3 HOH A 17 317 182 HOH HOH . 
F 3 HOH A 18 318 7 HOH HOH . 
F 3 HOH A 19 319 109 HOH HOH . 
F 3 HOH A 20 320 129 HOH HOH . 
F 3 HOH A 21 321 1 HOH HOH . 
F 3 HOH A 22 322 111 HOH HOH . 
F 3 HOH A 23 323 34 HOH HOH . 
F 3 HOH A 24 324 138 HOH HOH . 
F 3 HOH A 25 325 23 HOH HOH . 
F 3 HOH A 26 326 87 HOH HOH . 
F 3 HOH A 27 327 132 HOH HOH . 
F 3 HOH A 28 328 63 HOH HOH . 
F 3 HOH A 29 329 51 HOH HOH . 
F 3 HOH A 30 330 61 HOH HOH . 
F 3 HOH A 31 331 35 HOH HOH . 
F 3 HOH A 32 332 177 HOH HOH . 
F 3 HOH A 33 333 12 HOH HOH . 
F 3 HOH A 34 334 59 HOH HOH . 
F 3 HOH A 35 335 187 HOH HOH . 
F 3 HOH A 36 336 91 HOH HOH . 
F 3 HOH A 37 337 105 HOH HOH . 
F 3 HOH A 38 338 68 HOH HOH . 
F 3 HOH A 39 339 86 HOH HOH . 
F 3 HOH A 40 340 57 HOH HOH . 
F 3 HOH A 41 341 42 HOH HOH . 
F 3 HOH A 42 342 69 HOH HOH . 
F 3 HOH A 43 343 169 HOH HOH . 
F 3 HOH A 44 344 4 HOH HOH . 
F 3 HOH A 45 345 6 HOH HOH . 
F 3 HOH A 46 346 188 HOH HOH . 
F 3 HOH A 47 347 17 HOH HOH . 
F 3 HOH A 48 348 67 HOH HOH . 
F 3 HOH A 49 349 39 HOH HOH . 
F 3 HOH A 50 350 48 HOH HOH . 
F 3 HOH A 51 351 19 HOH HOH . 
F 3 HOH A 52 352 22 HOH HOH . 
F 3 HOH A 53 353 157 HOH HOH . 
F 3 HOH A 54 354 43 HOH HOH . 
F 3 HOH A 55 355 113 HOH HOH . 
F 3 HOH A 56 356 15 HOH HOH . 
F 3 HOH A 57 357 71 HOH HOH . 
F 3 HOH A 58 358 33 HOH HOH . 
F 3 HOH A 59 359 73 HOH HOH . 
F 3 HOH A 60 360 167 HOH HOH . 
F 3 HOH A 61 361 52 HOH HOH . 
F 3 HOH A 62 362 116 HOH HOH . 
F 3 HOH A 63 363 195 HOH HOH . 
F 3 HOH A 64 364 159 HOH HOH . 
F 3 HOH A 65 365 31 HOH HOH . 
F 3 HOH A 66 366 3 HOH HOH . 
F 3 HOH A 67 367 131 HOH HOH . 
F 3 HOH A 68 368 55 HOH HOH . 
F 3 HOH A 69 369 74 HOH HOH . 
F 3 HOH A 70 370 147 HOH HOH . 
F 3 HOH A 71 371 190 HOH HOH . 
F 3 HOH A 72 372 54 HOH HOH . 
F 3 HOH A 73 373 107 HOH HOH . 
F 3 HOH A 74 374 5 HOH HOH . 
F 3 HOH A 75 375 28 HOH HOH . 
F 3 HOH A 76 376 10 HOH HOH . 
F 3 HOH A 77 377 189 HOH HOH . 
F 3 HOH A 78 378 84 HOH HOH . 
F 3 HOH A 79 379 26 HOH HOH . 
F 3 HOH A 80 380 70 HOH HOH . 
F 3 HOH A 81 381 50 HOH HOH . 
F 3 HOH A 82 382 143 HOH HOH . 
F 3 HOH A 83 383 41 HOH HOH . 
F 3 HOH A 84 384 49 HOH HOH . 
F 3 HOH A 85 385 25 HOH HOH . 
F 3 HOH A 86 386 20 HOH HOH . 
F 3 HOH A 87 387 38 HOH HOH . 
F 3 HOH A 88 388 29 HOH HOH . 
F 3 HOH A 89 389 58 HOH HOH . 
F 3 HOH A 90 390 158 HOH HOH . 
F 3 HOH A 91 391 81 HOH HOH . 
F 3 HOH A 92 392 145 HOH HOH . 
F 3 HOH A 93 393 163 HOH HOH . 
F 3 HOH A 94 394 149 HOH HOH . 
F 3 HOH A 95 395 47 HOH HOH . 
F 3 HOH A 96 396 137 HOH HOH . 
F 3 HOH A 97 397 13 HOH HOH . 
F 3 HOH A 98 398 146 HOH HOH . 
F 3 HOH A 99 399 161 HOH HOH . 
F 3 HOH A 100 400 77 HOH HOH . 
F 3 HOH A 101 401 93 HOH HOH . 
F 3 HOH A 102 402 9 HOH HOH . 
F 3 HOH A 103 403 99 HOH HOH . 
F 3 HOH A 104 404 44 HOH HOH . 
F 3 HOH A 105 405 118 HOH HOH . 
F 3 HOH A 106 406 127 HOH HOH . 
F 3 HOH A 107 407 46 HOH HOH . 
F 3 HOH A 108 408 32 HOH HOH . 
F 3 HOH A 109 409 56 HOH HOH . 
F 3 HOH A 110 410 14 HOH HOH . 
F 3 HOH A 111 411 37 HOH HOH . 
F 3 HOH A 112 412 16 HOH HOH . 
F 3 HOH A 113 413 119 HOH HOH . 
F 3 HOH A 114 414 75 HOH HOH . 
F 3 HOH A 115 415 110 HOH HOH . 
F 3 HOH A 116 416 27 HOH HOH . 
F 3 HOH A 117 417 8 HOH HOH . 
F 3 HOH A 118 418 128 HOH HOH . 
F 3 HOH A 119 419 148 HOH HOH . 
F 3 HOH A 120 420 175 HOH HOH . 
F 3 HOH A 121 421 97 HOH HOH . 
F 3 HOH A 122 422 150 HOH HOH . 
F 3 HOH A 123 423 176 HOH HOH . 
F 3 HOH A 124 424 130 HOH HOH . 
F 3 HOH A 125 425 89 HOH HOH . 
F 3 HOH A 126 426 183 HOH HOH . 
F 3 HOH A 127 427 180 HOH HOH . 
F 3 HOH A 128 428 186 HOH HOH . 
F 3 HOH A 129 429 2 HOH HOH . 
F 3 HOH A 130 430 121 HOH HOH . 
F 3 HOH A 131 431 64 HOH HOH . 
F 3 HOH A 132 432 184 HOH HOH . 
F 3 HOH A 133 433 62 HOH HOH . 
F 3 HOH A 134 434 98 HOH HOH . 
F 3 HOH A 135 435 101 HOH HOH . 
F 3 HOH A 136 436 194 HOH HOH . 
F 3 HOH A 137 437 122 HOH HOH . 
F 3 HOH A 138 438 170 HOH HOH . 
F 3 HOH A 139 439 79 HOH HOH . 
F 3 HOH A 140 440 168 HOH HOH . 
F 3 HOH A 141 441 152 HOH HOH . 
F 3 HOH A 142 442 108 HOH HOH . 
F 3 HOH A 143 443 153 HOH HOH . 
F 3 HOH A 144 444 115 HOH HOH . 
F 3 HOH A 145 445 156 HOH HOH . 
F 3 HOH A 146 446 124 HOH HOH . 
F 3 HOH A 147 447 126 HOH HOH . 
F 3 HOH A 148 448 135 HOH HOH . 
F 3 HOH A 149 449 139 HOH HOH . 
F 3 HOH A 150 450 96 HOH HOH . 
F 3 HOH A 151 451 151 HOH HOH . 
F 3 HOH A 152 452 144 HOH HOH . 
F 3 HOH A 153 453 95 HOH HOH . 
F 3 HOH A 154 454 133 HOH HOH . 
F 3 HOH A 155 455 106 HOH HOH . 
F 3 HOH A 156 456 21 HOH HOH . 
F 3 HOH A 157 457 40 HOH HOH . 
F 3 HOH A 158 458 196 HOH HOH . 
F 3 HOH A 159 459 53 HOH HOH . 
F 3 HOH A 160 460 193 HOH HOH . 
F 3 HOH A 161 461 181 HOH HOH . 
F 3 HOH A 162 462 45 HOH HOH . 
F 3 HOH A 163 463 85 HOH HOH . 
F 3 HOH A 164 464 172 HOH HOH . 
F 3 HOH A 165 465 66 HOH HOH . 
F 3 HOH A 166 466 83 HOH HOH . 
F 3 HOH A 167 467 140 HOH HOH . 
F 3 HOH A 168 468 30 HOH HOH . 
F 3 HOH A 169 469 78 HOH HOH . 
F 3 HOH A 170 470 100 HOH HOH . 
F 3 HOH A 171 471 160 HOH HOH . 
F 3 HOH A 172 472 185 HOH HOH . 
F 3 HOH A 173 473 174 HOH HOH . 
F 3 HOH A 174 474 72 HOH HOH . 
F 3 HOH A 175 475 65 HOH HOH . 
F 3 HOH A 176 476 197 HOH HOH . 
F 3 HOH A 177 477 92 HOH HOH . 
F 3 HOH A 178 478 166 HOH HOH . 
F 3 HOH A 179 479 117 HOH HOH . 
F 3 HOH A 180 480 102 HOH HOH . 
F 3 HOH A 181 481 154 HOH HOH . 
F 3 HOH A 182 482 155 HOH HOH . 
F 3 HOH A 183 483 136 HOH HOH . 
F 3 HOH A 184 484 179 HOH HOH . 
F 3 HOH A 185 485 120 HOH HOH . 
F 3 HOH A 186 486 11 HOH HOH . 
F 3 HOH A 187 487 82 HOH HOH . 
F 3 HOH A 188 488 173 HOH HOH . 
F 3 HOH A 189 489 90 HOH HOH . 
F 3 HOH A 190 490 103 HOH HOH . 
F 3 HOH A 191 491 76 HOH HOH . 
F 3 HOH A 192 492 18 HOH HOH . 
F 3 HOH A 193 493 134 HOH HOH . 
F 3 HOH A 194 494 178 HOH HOH . 
F 3 HOH A 195 495 171 HOH HOH . 
F 3 HOH A 196 496 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . E 2 2.295 -4.449 -12.626 1 79.5 ? S SO4 204 A 1 
HETATM 2 O O1 SO4 . . . E 2 2.53 -5.099 -13.971 1 82.28 ? O1 SO4 204 A 1 
HETATM 3 O O2 SO4 . . . E 2 0.991 -5.094 -12.212 1 80.68 ? O2 SO4 204 A 1 
HETATM 4 O O3 SO4 . . . E 2 3.4 -4.784 -11.655 1 79.36 ? O3 SO4 204 A 1 
HETATM 5 O O4 SO4 . . . E 2 2.148 -2.955 -12.761 1 80.74 ? O4 SO4 204 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           491 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           5 
#