data_5YOG # _model_server_result.job_id QbnbSGhd4mzJ6O1EL8-N7w _model_server_result.datetime_utc '2024-12-25 02:29:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5yog # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 5YOG # _exptl.entry_id 5YOG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.63 _cell.angle_gamma 90 _cell.entry_id 5YOG _cell.length_a 32.607 _cell.length_b 56.321 _cell.length_c 41.418 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YOG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 14 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 14 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 93 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 93 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.07 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 338 n n S O2 SO4 doub 339 n n S O3 SO4 sing 340 n n S O4 SO4 sing 341 n n # _atom_sites.entry_id 5YOG _atom_sites.fract_transf_matrix[1][1] 0.030668 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006314 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017755 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024651 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 201 1 FMN FMN . C 3 GOL A 1 202 1 GOL GOL . D 3 GOL A 1 203 2 GOL GOL . E 4 SO4 A 1 204 1 SO4 SO4 . F 5 HOH A 1 301 144 HOH HOH . F 5 HOH A 2 302 150 HOH HOH . F 5 HOH A 3 303 91 HOH HOH . F 5 HOH A 4 304 133 HOH HOH . F 5 HOH A 5 305 54 HOH HOH . F 5 HOH A 6 306 61 HOH HOH . F 5 HOH A 7 307 38 HOH HOH . F 5 HOH A 8 308 59 HOH HOH . F 5 HOH A 9 309 140 HOH HOH . F 5 HOH A 10 310 74 HOH HOH . F 5 HOH A 11 311 112 HOH HOH . F 5 HOH A 12 312 92 HOH HOH . F 5 HOH A 13 313 100 HOH HOH . F 5 HOH A 14 314 116 HOH HOH . F 5 HOH A 15 315 93 HOH HOH . F 5 HOH A 16 316 60 HOH HOH . F 5 HOH A 17 317 18 HOH HOH . F 5 HOH A 18 318 141 HOH HOH . F 5 HOH A 19 319 103 HOH HOH . F 5 HOH A 20 320 10 HOH HOH . F 5 HOH A 21 321 28 HOH HOH . F 5 HOH A 22 322 56 HOH HOH . F 5 HOH A 23 323 114 HOH HOH . F 5 HOH A 24 324 80 HOH HOH . F 5 HOH A 25 325 88 HOH HOH . F 5 HOH A 26 326 32 HOH HOH . F 5 HOH A 27 327 83 HOH HOH . F 5 HOH A 28 328 16 HOH HOH . F 5 HOH A 29 329 30 HOH HOH . F 5 HOH A 30 330 111 HOH HOH . F 5 HOH A 31 331 76 HOH HOH . F 5 HOH A 32 332 126 HOH HOH . F 5 HOH A 33 333 50 HOH HOH . F 5 HOH A 34 334 48 HOH HOH . F 5 HOH A 35 335 67 HOH HOH . F 5 HOH A 36 336 35 HOH HOH . F 5 HOH A 37 337 94 HOH HOH . F 5 HOH A 38 338 26 HOH HOH . F 5 HOH A 39 339 71 HOH HOH . F 5 HOH A 40 340 135 HOH HOH . F 5 HOH A 41 341 113 HOH HOH . F 5 HOH A 42 342 17 HOH HOH . F 5 HOH A 43 343 75 HOH HOH . F 5 HOH A 44 344 125 HOH HOH . F 5 HOH A 45 345 2 HOH HOH . F 5 HOH A 46 346 138 HOH HOH . F 5 HOH A 47 347 6 HOH HOH . F 5 HOH A 48 348 21 HOH HOH . F 5 HOH A 49 349 128 HOH HOH . F 5 HOH A 50 350 146 HOH HOH . F 5 HOH A 51 351 8 HOH HOH . F 5 HOH A 52 352 82 HOH HOH . F 5 HOH A 53 353 55 HOH HOH . F 5 HOH A 54 354 105 HOH HOH . F 5 HOH A 55 355 12 HOH HOH . F 5 HOH A 56 356 7 HOH HOH . F 5 HOH A 57 357 1 HOH HOH . F 5 HOH A 58 358 3 HOH HOH . F 5 HOH A 59 359 31 HOH HOH . F 5 HOH A 60 360 154 HOH HOH . F 5 HOH A 61 361 14 HOH HOH . F 5 HOH A 62 362 22 HOH HOH . F 5 HOH A 63 363 36 HOH HOH . F 5 HOH A 64 364 9 HOH HOH . F 5 HOH A 65 365 40 HOH HOH . F 5 HOH A 66 366 45 HOH HOH . F 5 HOH A 67 367 77 HOH HOH . F 5 HOH A 68 368 19 HOH HOH . F 5 HOH A 69 369 20 HOH HOH . F 5 HOH A 70 370 41 HOH HOH . F 5 HOH A 71 371 148 HOH HOH . F 5 HOH A 72 372 120 HOH HOH . F 5 HOH A 73 373 47 HOH HOH . F 5 HOH A 74 374 57 HOH HOH . F 5 HOH A 75 375 44 HOH HOH . F 5 HOH A 76 376 62 HOH HOH . F 5 HOH A 77 377 15 HOH HOH . F 5 HOH A 78 378 63 HOH HOH . F 5 HOH A 79 379 39 HOH HOH . F 5 HOH A 80 380 24 HOH HOH . F 5 HOH A 81 381 5 HOH HOH . F 5 HOH A 82 382 33 HOH HOH . F 5 HOH A 83 383 4 HOH HOH . F 5 HOH A 84 384 13 HOH HOH . F 5 HOH A 85 385 152 HOH HOH . F 5 HOH A 86 386 51 HOH HOH . F 5 HOH A 87 387 27 HOH HOH . F 5 HOH A 88 388 23 HOH HOH . F 5 HOH A 89 389 72 HOH HOH . F 5 HOH A 90 390 134 HOH HOH . F 5 HOH A 91 391 42 HOH HOH . F 5 HOH A 92 392 25 HOH HOH . F 5 HOH A 93 393 49 HOH HOH . F 5 HOH A 94 394 73 HOH HOH . F 5 HOH A 95 395 64 HOH HOH . F 5 HOH A 96 396 69 HOH HOH . F 5 HOH A 97 397 87 HOH HOH . F 5 HOH A 98 398 65 HOH HOH . F 5 HOH A 99 399 53 HOH HOH . F 5 HOH A 100 400 90 HOH HOH . F 5 HOH A 101 401 139 HOH HOH . F 5 HOH A 102 402 149 HOH HOH . F 5 HOH A 103 403 11 HOH HOH . F 5 HOH A 104 404 118 HOH HOH . F 5 HOH A 105 405 34 HOH HOH . F 5 HOH A 106 406 145 HOH HOH . F 5 HOH A 107 407 78 HOH HOH . F 5 HOH A 108 408 106 HOH HOH . F 5 HOH A 109 409 29 HOH HOH . F 5 HOH A 110 410 58 HOH HOH . F 5 HOH A 111 411 43 HOH HOH . F 5 HOH A 112 412 142 HOH HOH . F 5 HOH A 113 413 137 HOH HOH . F 5 HOH A 114 414 107 HOH HOH . F 5 HOH A 115 415 119 HOH HOH . F 5 HOH A 116 416 153 HOH HOH . F 5 HOH A 117 417 99 HOH HOH . F 5 HOH A 118 418 143 HOH HOH . F 5 HOH A 119 419 129 HOH HOH . F 5 HOH A 120 420 97 HOH HOH . F 5 HOH A 121 421 131 HOH HOH . F 5 HOH A 122 422 109 HOH HOH . F 5 HOH A 123 423 123 HOH HOH . F 5 HOH A 124 424 147 HOH HOH . F 5 HOH A 125 425 104 HOH HOH . F 5 HOH A 126 426 151 HOH HOH . F 5 HOH A 127 427 98 HOH HOH . F 5 HOH A 128 428 101 HOH HOH . F 5 HOH A 129 429 130 HOH HOH . F 5 HOH A 130 430 122 HOH HOH . F 5 HOH A 131 431 46 HOH HOH . F 5 HOH A 132 432 117 HOH HOH . F 5 HOH A 133 433 84 HOH HOH . F 5 HOH A 134 434 85 HOH HOH . F 5 HOH A 135 435 124 HOH HOH . F 5 HOH A 136 436 81 HOH HOH . F 5 HOH A 137 437 155 HOH HOH . F 5 HOH A 138 438 108 HOH HOH . F 5 HOH A 139 439 37 HOH HOH . F 5 HOH A 140 440 66 HOH HOH . F 5 HOH A 141 441 96 HOH HOH . F 5 HOH A 142 442 89 HOH HOH . F 5 HOH A 143 443 79 HOH HOH . F 5 HOH A 144 444 110 HOH HOH . F 5 HOH A 145 445 115 HOH HOH . F 5 HOH A 146 446 95 HOH HOH . F 5 HOH A 147 447 156 HOH HOH . F 5 HOH A 148 448 68 HOH HOH . F 5 HOH A 149 449 136 HOH HOH . F 5 HOH A 150 450 86 HOH HOH . F 5 HOH A 151 451 70 HOH HOH . F 5 HOH A 152 452 121 HOH HOH . F 5 HOH A 153 453 132 HOH HOH . F 5 HOH A 154 454 102 HOH HOH . F 5 HOH A 155 455 52 HOH HOH . F 5 HOH A 156 456 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 4 31.709 -13.988 9.44 1 85.26 ? S SO4 204 A 1 HETATM 2 O O1 SO4 . . . E 4 30.539 -14.036 8.56 1 65.72 ? O1 SO4 204 A 1 HETATM 3 O O2 SO4 . . . E 4 32.751 -13.194 8.82 1 32.38 ? O2 SO4 204 A 1 HETATM 4 O O3 SO4 . . . E 4 31.341 -13.415 10.733 1 80.33 ? O3 SO4 204 A 1 HETATM 5 O O4 SO4 . . . E 4 32.283 -15.314 9.636 1 52.88 ? O4 SO4 204 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #