data_5YRZ # _model_server_result.job_id GJ_fyoNYQ66ixQiItS6Jyg _model_server_result.datetime_utc '2024-11-26 03:00:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5yrz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 5YRZ # _exptl.entry_id 5YRZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5YRZ _cell.length_a 106.263 _cell.length_b 116.541 _cell.length_c 42.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YRZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 H N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 5YRZ _atom_sites.fract_transf_matrix[1][1] 0.009411 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008581 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023535 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 201 1 SO4 SO4 . F 3 SO4 A 1 202 3 SO4 SO4 . G 4 GOL A 1 203 4 GOL GOL . H 3 SO4 C 1 201 2 SO4 SO4 . I 5 HOH A 1 301 123 HOH HOH . I 5 HOH A 2 302 125 HOH HOH . I 5 HOH A 3 303 41 HOH HOH . I 5 HOH A 4 304 38 HOH HOH . I 5 HOH A 5 305 87 HOH HOH . I 5 HOH A 6 306 82 HOH HOH . I 5 HOH A 7 307 124 HOH HOH . I 5 HOH A 8 308 126 HOH HOH . I 5 HOH A 9 309 54 HOH HOH . I 5 HOH A 10 310 46 HOH HOH . I 5 HOH A 11 311 33 HOH HOH . I 5 HOH A 12 312 16 HOH HOH . I 5 HOH A 13 313 65 HOH HOH . I 5 HOH A 14 314 64 HOH HOH . I 5 HOH A 15 315 22 HOH HOH . I 5 HOH A 16 316 8 HOH HOH . I 5 HOH A 17 317 53 HOH HOH . I 5 HOH A 18 318 9 HOH HOH . I 5 HOH A 19 319 39 HOH HOH . I 5 HOH A 20 320 1 HOH HOH . I 5 HOH A 21 321 26 HOH HOH . I 5 HOH A 22 322 92 HOH HOH . I 5 HOH A 23 323 48 HOH HOH . I 5 HOH A 24 324 120 HOH HOH . I 5 HOH A 25 325 66 HOH HOH . I 5 HOH A 26 326 17 HOH HOH . I 5 HOH A 27 327 19 HOH HOH . I 5 HOH A 28 328 61 HOH HOH . I 5 HOH A 29 329 15 HOH HOH . I 5 HOH A 30 330 63 HOH HOH . I 5 HOH A 31 331 42 HOH HOH . I 5 HOH A 32 332 52 HOH HOH . I 5 HOH A 33 333 34 HOH HOH . I 5 HOH A 34 334 12 HOH HOH . I 5 HOH A 35 335 81 HOH HOH . I 5 HOH A 36 336 51 HOH HOH . I 5 HOH A 37 337 100 HOH HOH . I 5 HOH A 38 338 97 HOH HOH . I 5 HOH A 39 339 83 HOH HOH . J 5 HOH B 1 201 90 HOH HOH . J 5 HOH B 2 202 23 HOH HOH . J 5 HOH B 3 203 7 HOH HOH . J 5 HOH B 4 204 78 HOH HOH . J 5 HOH B 5 205 84 HOH HOH . J 5 HOH B 6 206 28 HOH HOH . J 5 HOH B 7 207 91 HOH HOH . J 5 HOH B 8 208 30 HOH HOH . J 5 HOH B 9 209 29 HOH HOH . J 5 HOH B 10 210 88 HOH HOH . J 5 HOH B 11 211 72 HOH HOH . J 5 HOH B 12 212 121 HOH HOH . J 5 HOH B 13 213 115 HOH HOH . J 5 HOH B 14 214 44 HOH HOH . K 5 HOH C 1 301 6 HOH HOH . K 5 HOH C 2 302 3 HOH HOH . K 5 HOH C 3 303 59 HOH HOH . K 5 HOH C 4 304 50 HOH HOH . K 5 HOH C 5 305 108 HOH HOH . K 5 HOH C 6 306 119 HOH HOH . K 5 HOH C 7 307 13 HOH HOH . K 5 HOH C 8 308 40 HOH HOH . K 5 HOH C 9 309 5 HOH HOH . K 5 HOH C 10 310 43 HOH HOH . K 5 HOH C 11 311 96 HOH HOH . K 5 HOH C 12 312 2 HOH HOH . K 5 HOH C 13 313 45 HOH HOH . K 5 HOH C 14 314 58 HOH HOH . K 5 HOH C 15 315 10 HOH HOH . K 5 HOH C 16 316 62 HOH HOH . K 5 HOH C 17 317 11 HOH HOH . K 5 HOH C 18 318 37 HOH HOH . K 5 HOH C 19 319 31 HOH HOH . K 5 HOH C 20 320 36 HOH HOH . K 5 HOH C 21 321 80 HOH HOH . K 5 HOH C 22 322 85 HOH HOH . L 5 HOH D 1 201 14 HOH HOH . L 5 HOH D 2 202 71 HOH HOH . L 5 HOH D 3 203 47 HOH HOH . L 5 HOH D 4 204 27 HOH HOH . L 5 HOH D 5 205 25 HOH HOH . L 5 HOH D 6 206 111 HOH HOH . L 5 HOH D 7 207 60 HOH HOH . L 5 HOH D 8 208 74 HOH HOH . L 5 HOH D 9 209 101 HOH HOH . L 5 HOH D 10 210 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 3 235.766 155.134 83.275 1 84.77 ? S SO4 202 A 1 HETATM 2 O O1 SO4 . . . F 3 236.887 155.047 82.34 1 74.13 ? O1 SO4 202 A 1 HETATM 3 O O2 SO4 . . . F 3 234.978 156.329 82.971 1 58.61 ? O2 SO4 202 A 1 HETATM 4 O O3 SO4 . . . F 3 236.267 155.21 84.648 1 58.26 ? O3 SO4 202 A 1 HETATM 5 O O4 SO4 . . . F 3 234.94 153.939 83.132 1 55.72 ? O4 SO4 202 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 421 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #