data_5YS0
#
_model_server_result.job_id            R3P1T3a9HVND00ZsfCqobw 
_model_server_result.datetime_utc      '2024-11-08 04:04:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ys0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1301}' 
#
_entry.id    5YS0 
#
_exptl.entry_id    5YS0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              396.648 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ERGOSTEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.14 
_cell.angle_gamma         90 
_cell.entry_id            5YS0 
_cell.length_a            189.717 
_cell.length_b            70.315 
_cell.length_c            42.508 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5YS0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,F 1 1 
B,E,G 2 1 
C,H 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
#
_chem_comp.formula           'C28 H44 O' 
_chem_comp.formula_weight    396.648 
_chem_comp.id                ERG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ERGOSTEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 ERG sing 83 n n 
C1 C10 ERG sing 84 n n 
C1 H11 ERG sing 85 n n 
C1 H12 ERG sing 86 n n 
C2 C3 ERG sing 87 n n 
C2 H21 ERG sing 88 n n 
C2 H22A ERG sing 89 n n 
C3 C4 ERG sing 90 n n 
C3 O1 ERG sing 91 n n 
C3 H3 ERG sing 92 n n 
C4 C5 ERG sing 93 n n 
C4 H41 ERG sing 94 n n 
C4 H42 ERG sing 95 n n 
C5 C6 ERG doub 96 n n 
C5 C10 ERG sing 97 n n 
C6 C7 ERG sing 98 n n 
C6 H6 ERG sing 99 n n 
C7 C8 ERG doub 100 n n 
C7 H7 ERG sing 101 n n 
C8 C9 ERG sing 102 n n 
C8 C14 ERG sing 103 n n 
C9 C10 ERG sing 104 n n 
C9 C11 ERG sing 105 n n 
C9 H9 ERG sing 106 n n 
C10 C19 ERG sing 107 n n 
C11 C12 ERG sing 108 n n 
C11 H111 ERG sing 109 n n 
C11 H112 ERG sing 110 n n 
C12 C13 ERG sing 111 n n 
C12 H121 ERG sing 112 n n 
C12 H122 ERG sing 113 n n 
C13 C14 ERG sing 114 n n 
C13 C17 ERG sing 115 n n 
C13 C18 ERG sing 116 n n 
C14 C15 ERG sing 117 n n 
C14 H14 ERG sing 118 n n 
C15 C16 ERG sing 119 n n 
C15 H151 ERG sing 120 n n 
C15 H152 ERG sing 121 n n 
C16 C17 ERG sing 122 n n 
C16 H161 ERG sing 123 n n 
C16 H162 ERG sing 124 n n 
C17 C20 ERG sing 125 n n 
C17 H17 ERG sing 126 n n 
C18 H181 ERG sing 127 n n 
C18 H182 ERG sing 128 n n 
C18 H183 ERG sing 129 n n 
C19 H191 ERG sing 130 n n 
C19 H192 ERG sing 131 n n 
C19 H193 ERG sing 132 n n 
C20 C21 ERG sing 133 n n 
C20 C22 ERG sing 134 n n 
C20 H20 ERG sing 135 n n 
C21 H211 ERG sing 136 n n 
C21 H212 ERG sing 137 n n 
C21 H213 ERG sing 138 n n 
C22 C23 ERG doub 139 e n 
C22 H22 ERG sing 140 n n 
C23 C24 ERG sing 141 n n 
C23 H23 ERG sing 142 n n 
C24 C25 ERG sing 143 n n 
C24 C28 ERG sing 144 n n 
C24 H24 ERG sing 145 n n 
C25 C26 ERG sing 146 n n 
C25 C27 ERG sing 147 n n 
C25 H25 ERG sing 148 n n 
C26 H261 ERG sing 149 n n 
C26 H262 ERG sing 150 n n 
C26 H263 ERG sing 151 n n 
C27 H271 ERG sing 152 n n 
C27 H272 ERG sing 153 n n 
C27 H273 ERG sing 154 n n 
C28 H281 ERG sing 155 n n 
C28 H282 ERG sing 156 n n 
C28 H283 ERG sing 157 n n 
O1 HO1 ERG sing 158 n n 
#
_atom_sites.entry_id                     5YS0 
_atom_sites.fract_transf_matrix[1][1]    0.005271 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00123 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014222 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024157 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ERG A 1 1301 1 ERG ERG . 
E 2 ERG B 1 1301 1 ERG ERG . 
F 3 HOH A 1 1401 23 HOH HOH . 
F 3 HOH A 2 1402 5 HOH HOH . 
F 3 HOH A 3 1403 2 HOH HOH . 
F 3 HOH A 4 1404 29 HOH HOH . 
F 3 HOH A 5 1405 7 HOH HOH . 
F 3 HOH A 6 1406 6 HOH HOH . 
F 3 HOH A 7 1407 3 HOH HOH . 
F 3 HOH A 8 1408 13 HOH HOH . 
F 3 HOH A 9 1409 12 HOH HOH . 
F 3 HOH A 10 1410 28 HOH HOH . 
G 3 HOH B 1 1401 1 HOH HOH . 
G 3 HOH B 2 1402 21 HOH HOH . 
G 3 HOH B 3 1403 14 HOH HOH . 
G 3 HOH B 4 1404 25 HOH HOH . 
G 3 HOH B 5 1405 24 HOH HOH . 
H 3 HOH C 1 1301 22 HOH HOH . 
H 3 HOH C 2 1302 19 HOH HOH . 
H 3 HOH C 3 1303 16 HOH HOH . 
H 3 HOH C 4 1304 9 HOH HOH . 
H 3 HOH C 5 1305 4 HOH HOH . 
H 3 HOH C 6 1306 30 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 ERG . . . E 2 -105.583 4.291 -19.663 0.75 70.83 ? C1 ERG 1301 B 1 
HETATM 2 C C2 ERG . . . E 2 -105.63 2.962 -20.424 0.75 68.99 ? C2 ERG 1301 B 1 
HETATM 3 C C3 ERG . . . E 2 -106.139 1.882 -19.486 0.75 69.52 ? C3 ERG 1301 B 1 
HETATM 4 C C4 ERG . . . E 2 -107.528 2.267 -18.957 0.75 67.51 ? C4 ERG 1301 B 1 
HETATM 5 C C5 ERG . . . E 2 -107.555 3.554 -18.393 0.75 71.26 ? C5 ERG 1301 B 1 
HETATM 6 C C6 ERG . . . E 2 -108.254 3.665 -17.179 0.75 73.97 ? C6 ERG 1301 B 1 
HETATM 7 C C7 ERG . . . E 2 -108.285 4.885 -16.499 0.75 76.04 ? C7 ERG 1301 B 1 
HETATM 8 C C8 ERG . . . E 2 -107.603 6.011 -16.984 0.75 77.74 ? C8 ERG 1301 B 1 
HETATM 9 C C9 ERG . . . E 2 -106.607 5.847 -18.012 0.75 78.55 ? C9 ERG 1301 B 1 
HETATM 10 C C10 ERG . . . E 2 -106.935 4.693 -19.032 0.75 71.95 ? C10 ERG 1301 B 1 
HETATM 11 C C11 ERG . . . E 2 -106.189 7.159 -18.719 0.75 78.96 ? C11 ERG 1301 B 1 
HETATM 12 C C12 ERG . . . E 2 -106.111 8.359 -17.76 0.75 76.11 ? C12 ERG 1301 B 1 
HETATM 13 C C13 ERG . . . E 2 -107.439 8.507 -17.015 0.75 75.6 ? C13 ERG 1301 B 1 
HETATM 14 C C14 ERG . . . E 2 -107.603 7.21 -16.213 0.75 74.81 ? C14 ERG 1301 B 1 
HETATM 15 C C15 ERG . . . E 2 -108.822 7.517 -15.337 0.75 74.63 ? C15 ERG 1301 B 1 
HETATM 16 C C16 ERG . . . E 2 -108.425 8.889 -14.803 0.75 77.57 ? C16 ERG 1301 B 1 
HETATM 17 C C17 ERG . . . E 2 -107.37 9.443 -15.78 0.75 75.98 ? C17 ERG 1301 B 1 
HETATM 18 C C18 ERG . . . E 2 -108.611 8.867 -17.974 0.75 72.32 ? C18 ERG 1301 B 1 
HETATM 19 C C19 ERG . . . E 2 -107.884 5.187 -20.156 0.75 66.13 ? C19 ERG 1301 B 1 
HETATM 20 C C20 ERG . . . E 2 -107.451 10.978 -15.955 0.75 74.32 ? C20 ERG 1301 B 1 
HETATM 21 C C21 ERG . . . E 2 -106.086 11.617 -16.279 0.75 70.06 ? C21 ERG 1301 B 1 
HETATM 22 C C22 ERG . . . E 2 -107.947 11.672 -14.686 0.75 79.66 ? C22 ERG 1301 B 1 
HETATM 23 C C23 ERG . . . E 2 -108.716 12.977 -14.896 0.75 82.57 ? C23 ERG 1301 B 1 
HETATM 24 C C24 ERG . . . E 2 -109.192 13.679 -13.627 0.75 83.3 ? C24 ERG 1301 B 1 
HETATM 25 C C25 ERG . . . E 2 -108.628 15.12 -13.5 0.75 83.21 ? C25 ERG 1301 B 1 
HETATM 26 C C26 ERG . . . E 2 -108.995 15.786 -12.161 0.75 86.66 ? C26 ERG 1301 B 1 
HETATM 27 C C27 ERG . . . E 2 -107.097 15.184 -13.613 0.75 65.25 ? C27 ERG 1301 B 1 
HETATM 28 C C28 ERG . . . E 2 -110.723 13.675 -13.694 0.75 84.03 ? C28 ERG 1301 B 1 
HETATM 29 O O1 ERG . . . E 2 -106.223 0.63 -20.192 0.75 65.26 ? O1 ERG 1301 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           29 
#