data_5YUJ # _model_server_result.job_id FrhaFYQJPFk0myb9u6f7rA _model_server_result.datetime_utc '2024-11-15 02:39:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5yuj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5YUJ # _exptl.entry_id 5YUJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.27 _cell.angle_gamma 90 _cell.entry_id 5YUJ _cell.length_a 42.258 _cell.length_b 41.294 _cell.length_c 72.094 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YUJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 D O HOH . A HOH 431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.961 ? metalc ? metalc5 B ZN ZN . A ZN 301 1_555 D O HOH . A HOH 629 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5YUJ _atom_sites.fract_transf_matrix[1][1] 0.023664 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006017 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024217 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 301 ZN ZN . C 3 GOL A 1 302 302 GOL GOL . D 4 HOH A 1 401 401 HOH HOH . D 4 HOH A 2 402 402 HOH HOH . D 4 HOH A 3 403 409 HOH HOH . D 4 HOH A 4 404 408 HOH HOH . D 4 HOH A 5 405 468 HOH HOH . D 4 HOH A 6 406 406 HOH HOH . D 4 HOH A 7 407 404 HOH HOH . D 4 HOH A 8 408 405 HOH HOH . D 4 HOH A 9 409 410 HOH HOH . D 4 HOH A 10 410 427 HOH HOH . D 4 HOH A 11 411 430 HOH HOH . D 4 HOH A 12 412 419 HOH HOH . D 4 HOH A 13 413 484 HOH HOH . D 4 HOH A 14 414 425 HOH HOH . D 4 HOH A 15 415 420 HOH HOH . D 4 HOH A 16 416 429 HOH HOH . D 4 HOH A 17 417 412 HOH HOH . D 4 HOH A 18 418 422 HOH HOH . D 4 HOH A 19 419 439 HOH HOH . D 4 HOH A 20 420 413 HOH HOH . D 4 HOH A 21 421 469 HOH HOH . D 4 HOH A 22 422 428 HOH HOH . D 4 HOH A 23 423 553 HOH HOH . D 4 HOH A 24 424 418 HOH HOH . D 4 HOH A 25 425 461 HOH HOH . D 4 HOH A 26 426 431 HOH HOH . D 4 HOH A 27 427 488 HOH HOH . D 4 HOH A 28 428 435 HOH HOH . D 4 HOH A 29 429 479 HOH HOH . D 4 HOH A 30 430 436 HOH HOH . D 4 HOH A 31 431 433 HOH HOH . D 4 HOH A 32 432 438 HOH HOH . D 4 HOH A 33 433 486 HOH HOH . D 4 HOH A 34 434 416 HOH HOH . D 4 HOH A 35 435 437 HOH HOH . D 4 HOH A 36 436 434 HOH HOH . D 4 HOH A 37 437 432 HOH HOH . D 4 HOH A 38 438 457 HOH HOH . D 4 HOH A 39 439 421 HOH HOH . D 4 HOH A 40 440 444 HOH HOH . D 4 HOH A 41 441 445 HOH HOH . D 4 HOH A 42 442 452 HOH HOH . D 4 HOH A 43 443 443 HOH HOH . D 4 HOH A 44 444 447 HOH HOH . D 4 HOH A 45 445 446 HOH HOH . D 4 HOH A 46 446 441 HOH HOH . D 4 HOH A 47 447 456 HOH HOH . D 4 HOH A 48 448 453 HOH HOH . D 4 HOH A 49 449 458 HOH HOH . D 4 HOH A 50 450 403 HOH HOH . D 4 HOH A 51 451 454 HOH HOH . D 4 HOH A 52 452 546 HOH HOH . D 4 HOH A 53 453 459 HOH HOH . D 4 HOH A 54 454 462 HOH HOH . D 4 HOH A 55 455 466 HOH HOH . D 4 HOH A 56 456 451 HOH HOH . D 4 HOH A 57 457 539 HOH HOH . D 4 HOH A 58 458 467 HOH HOH . D 4 HOH A 59 459 480 HOH HOH . D 4 HOH A 60 460 555 HOH HOH . D 4 HOH A 61 461 474 HOH HOH . D 4 HOH A 62 462 649 HOH HOH . D 4 HOH A 63 463 473 HOH HOH . D 4 HOH A 64 464 470 HOH HOH . D 4 HOH A 65 465 487 HOH HOH . D 4 HOH A 66 466 465 HOH HOH . D 4 HOH A 67 467 4 HOH HOH . D 4 HOH A 68 468 478 HOH HOH . D 4 HOH A 69 469 455 HOH HOH . D 4 HOH A 70 470 472 HOH HOH . D 4 HOH A 71 471 476 HOH HOH . D 4 HOH A 72 472 492 HOH HOH . D 4 HOH A 73 473 482 HOH HOH . D 4 HOH A 74 474 477 HOH HOH . D 4 HOH A 75 475 483 HOH HOH . D 4 HOH A 76 476 502 HOH HOH . D 4 HOH A 77 477 490 HOH HOH . D 4 HOH A 78 478 499 HOH HOH . D 4 HOH A 79 479 489 HOH HOH . D 4 HOH A 80 480 560 HOH HOH . D 4 HOH A 81 481 500 HOH HOH . D 4 HOH A 82 482 485 HOH HOH . D 4 HOH A 83 483 495 HOH HOH . D 4 HOH A 84 484 527 HOH HOH . D 4 HOH A 85 485 494 HOH HOH . D 4 HOH A 86 486 501 HOH HOH . D 4 HOH A 87 487 497 HOH HOH . D 4 HOH A 88 488 515 HOH HOH . D 4 HOH A 89 489 498 HOH HOH . D 4 HOH A 90 490 506 HOH HOH . D 4 HOH A 91 491 464 HOH HOH . D 4 HOH A 92 492 650 HOH HOH . D 4 HOH A 93 493 514 HOH HOH . D 4 HOH A 94 494 525 HOH HOH . D 4 HOH A 95 495 517 HOH HOH . D 4 HOH A 96 496 508 HOH HOH . D 4 HOH A 97 497 509 HOH HOH . D 4 HOH A 98 498 511 HOH HOH . D 4 HOH A 99 499 524 HOH HOH . D 4 HOH A 100 500 512 HOH HOH . D 4 HOH A 101 501 536 HOH HOH . D 4 HOH A 102 502 510 HOH HOH . D 4 HOH A 103 503 513 HOH HOH . D 4 HOH A 104 504 518 HOH HOH . D 4 HOH A 105 505 522 HOH HOH . D 4 HOH A 106 506 529 HOH HOH . D 4 HOH A 107 507 528 HOH HOH . D 4 HOH A 108 508 538 HOH HOH . D 4 HOH A 109 509 547 HOH HOH . D 4 HOH A 110 510 520 HOH HOH . D 4 HOH A 111 511 516 HOH HOH . D 4 HOH A 112 512 526 HOH HOH . D 4 HOH A 113 513 542 HOH HOH . D 4 HOH A 114 514 549 HOH HOH . D 4 HOH A 115 515 523 HOH HOH . D 4 HOH A 116 516 607 HOH HOH . D 4 HOH A 117 517 558 HOH HOH . D 4 HOH A 118 518 537 HOH HOH . D 4 HOH A 119 519 541 HOH HOH . D 4 HOH A 120 520 531 HOH HOH . D 4 HOH A 121 521 505 HOH HOH . D 4 HOH A 122 522 543 HOH HOH . D 4 HOH A 123 523 493 HOH HOH . D 4 HOH A 124 524 544 HOH HOH . D 4 HOH A 125 525 530 HOH HOH . D 4 HOH A 126 526 534 HOH HOH . D 4 HOH A 127 527 562 HOH HOH . D 4 HOH A 128 528 540 HOH HOH . D 4 HOH A 129 529 532 HOH HOH . D 4 HOH A 130 530 545 HOH HOH . D 4 HOH A 131 531 533 HOH HOH . D 4 HOH A 132 532 552 HOH HOH . D 4 HOH A 133 533 551 HOH HOH . D 4 HOH A 134 534 556 HOH HOH . D 4 HOH A 135 535 565 HOH HOH . D 4 HOH A 136 536 519 HOH HOH . D 4 HOH A 137 537 559 HOH HOH . D 4 HOH A 138 538 563 HOH HOH . D 4 HOH A 139 539 557 HOH HOH . D 4 HOH A 140 540 554 HOH HOH . D 4 HOH A 141 541 673 HOH HOH . D 4 HOH A 142 542 481 HOH HOH . D 4 HOH A 143 543 548 HOH HOH . D 4 HOH A 144 544 550 HOH HOH . D 4 HOH A 145 545 585 HOH HOH . D 4 HOH A 146 546 568 HOH HOH . D 4 HOH A 147 547 460 HOH HOH . D 4 HOH A 148 548 571 HOH HOH . D 4 HOH A 149 549 564 HOH HOH . D 4 HOH A 150 550 602 HOH HOH . D 4 HOH A 151 551 589 HOH HOH . D 4 HOH A 152 552 566 HOH HOH . D 4 HOH A 153 553 579 HOH HOH . D 4 HOH A 154 554 581 HOH HOH . D 4 HOH A 155 555 600 HOH HOH . D 4 HOH A 156 556 599 HOH HOH . D 4 HOH A 157 557 588 HOH HOH . D 4 HOH A 158 558 603 HOH HOH . D 4 HOH A 159 559 574 HOH HOH . D 4 HOH A 160 560 582 HOH HOH . D 4 HOH A 161 561 587 HOH HOH . D 4 HOH A 162 562 590 HOH HOH . D 4 HOH A 163 563 584 HOH HOH . D 4 HOH A 164 564 578 HOH HOH . D 4 HOH A 165 565 583 HOH HOH . D 4 HOH A 166 566 625 HOH HOH . D 4 HOH A 167 567 592 HOH HOH . D 4 HOH A 168 568 597 HOH HOH . D 4 HOH A 169 569 577 HOH HOH . D 4 HOH A 170 570 586 HOH HOH . D 4 HOH A 171 571 605 HOH HOH . D 4 HOH A 172 572 601 HOH HOH . D 4 HOH A 173 573 426 HOH HOH . D 4 HOH A 174 574 626 HOH HOH . D 4 HOH A 175 575 609 HOH HOH . D 4 HOH A 176 576 595 HOH HOH . D 4 HOH A 177 577 608 HOH HOH . D 4 HOH A 178 578 615 HOH HOH . D 4 HOH A 179 579 596 HOH HOH . D 4 HOH A 180 580 623 HOH HOH . D 4 HOH A 181 581 606 HOH HOH . D 4 HOH A 182 582 610 HOH HOH . D 4 HOH A 183 583 496 HOH HOH . D 4 HOH A 184 584 622 HOH HOH . D 4 HOH A 185 585 442 HOH HOH . D 4 HOH A 186 586 613 HOH HOH . D 4 HOH A 187 587 598 HOH HOH . D 4 HOH A 188 588 632 HOH HOH . D 4 HOH A 189 589 612 HOH HOH . D 4 HOH A 190 590 463 HOH HOH . D 4 HOH A 191 591 611 HOH HOH . D 4 HOH A 192 592 670 HOH HOH . D 4 HOH A 193 593 618 HOH HOH . D 4 HOH A 194 594 620 HOH HOH . D 4 HOH A 195 595 617 HOH HOH . D 4 HOH A 196 596 669 HOH HOH . D 4 HOH A 197 597 627 HOH HOH . D 4 HOH A 198 598 614 HOH HOH . D 4 HOH A 199 599 621 HOH HOH . D 4 HOH A 200 600 624 HOH HOH . D 4 HOH A 201 601 604 HOH HOH . D 4 HOH A 202 602 616 HOH HOH . D 4 HOH A 203 603 440 HOH HOH . D 4 HOH A 204 604 637 HOH HOH . D 4 HOH A 205 605 635 HOH HOH . D 4 HOH A 206 606 448 HOH HOH . D 4 HOH A 207 607 628 HOH HOH . D 4 HOH A 208 608 630 HOH HOH . D 4 HOH A 209 609 2 HOH HOH . D 4 HOH A 210 610 640 HOH HOH . D 4 HOH A 211 611 636 HOH HOH . D 4 HOH A 212 612 567 HOH HOH . D 4 HOH A 213 613 631 HOH HOH . D 4 HOH A 214 614 491 HOH HOH . D 4 HOH A 215 615 634 HOH HOH . D 4 HOH A 216 616 645 HOH HOH . D 4 HOH A 217 617 643 HOH HOH . D 4 HOH A 218 618 646 HOH HOH . D 4 HOH A 219 619 642 HOH HOH . D 4 HOH A 220 620 639 HOH HOH . D 4 HOH A 221 621 651 HOH HOH . D 4 HOH A 222 622 667 HOH HOH . D 4 HOH A 223 623 652 HOH HOH . D 4 HOH A 224 624 654 HOH HOH . D 4 HOH A 225 625 657 HOH HOH . D 4 HOH A 226 626 662 HOH HOH . D 4 HOH A 227 627 638 HOH HOH . D 4 HOH A 228 628 655 HOH HOH . D 4 HOH A 229 629 671 HOH HOH . D 4 HOH A 230 630 653 HOH HOH . D 4 HOH A 231 631 658 HOH HOH . D 4 HOH A 232 632 656 HOH HOH . D 4 HOH A 233 633 661 HOH HOH . D 4 HOH A 234 634 660 HOH HOH . D 4 HOH A 235 635 3 HOH HOH . D 4 HOH A 236 636 648 HOH HOH . D 4 HOH A 237 637 629 HOH HOH . D 4 HOH A 238 638 691 HOH HOH . D 4 HOH A 239 639 668 HOH HOH . D 4 HOH A 240 640 684 HOH HOH . D 4 HOH A 241 641 678 HOH HOH . D 4 HOH A 242 642 695 HOH HOH . D 4 HOH A 243 643 679 HOH HOH . D 4 HOH A 244 644 689 HOH HOH . D 4 HOH A 245 645 674 HOH HOH . D 4 HOH A 246 646 683 HOH HOH . D 4 HOH A 247 647 680 HOH HOH . D 4 HOH A 248 648 676 HOH HOH . D 4 HOH A 249 649 697 HOH HOH . D 4 HOH A 250 650 703 HOH HOH . D 4 HOH A 251 651 698 HOH HOH . D 4 HOH A 252 652 700 HOH HOH . D 4 HOH A 253 653 1 HOH HOH . D 4 HOH A 254 654 675 HOH HOH . D 4 HOH A 255 655 706 HOH HOH . D 4 HOH A 256 656 702 HOH HOH . D 4 HOH A 257 657 707 HOH HOH . D 4 HOH A 258 658 690 HOH HOH . D 4 HOH A 259 659 705 HOH HOH . D 4 HOH A 260 660 771 HOH HOH . D 4 HOH A 261 661 710 HOH HOH . D 4 HOH A 262 662 712 HOH HOH . D 4 HOH A 263 663 672 HOH HOH . D 4 HOH A 264 664 701 HOH HOH . D 4 HOH A 265 665 709 HOH HOH . D 4 HOH A 266 666 740 HOH HOH . D 4 HOH A 267 667 717 HOH HOH . D 4 HOH A 268 668 721 HOH HOH . D 4 HOH A 269 669 719 HOH HOH . D 4 HOH A 270 670 699 HOH HOH . D 4 HOH A 271 671 718 HOH HOH . D 4 HOH A 272 672 720 HOH HOH . D 4 HOH A 273 673 722 HOH HOH . D 4 HOH A 274 674 725 HOH HOH . D 4 HOH A 275 675 723 HOH HOH . D 4 HOH A 276 676 726 HOH HOH . D 4 HOH A 277 677 730 HOH HOH . D 4 HOH A 278 678 727 HOH HOH . D 4 HOH A 279 679 739 HOH HOH . D 4 HOH A 280 680 736 HOH HOH . D 4 HOH A 281 681 734 HOH HOH . D 4 HOH A 282 682 738 HOH HOH . D 4 HOH A 283 683 737 HOH HOH . D 4 HOH A 284 684 751 HOH HOH . D 4 HOH A 285 685 741 HOH HOH . D 4 HOH A 286 686 729 HOH HOH . D 4 HOH A 287 687 742 HOH HOH . D 4 HOH A 288 688 743 HOH HOH . D 4 HOH A 289 689 749 HOH HOH . D 4 HOH A 290 690 732 HOH HOH . D 4 HOH A 291 691 748 HOH HOH . D 4 HOH A 292 692 747 HOH HOH . D 4 HOH A 293 693 750 HOH HOH . D 4 HOH A 294 694 752 HOH HOH . D 4 HOH A 295 695 753 HOH HOH . D 4 HOH A 296 696 755 HOH HOH . D 4 HOH A 297 697 756 HOH HOH . D 4 HOH A 298 698 758 HOH HOH . D 4 HOH A 299 699 759 HOH HOH . D 4 HOH A 300 700 762 HOH HOH . D 4 HOH A 301 701 763 HOH HOH . D 4 HOH A 302 702 760 HOH HOH . D 4 HOH A 303 703 764 HOH HOH . D 4 HOH A 304 704 761 HOH HOH . D 4 HOH A 305 705 768 HOH HOH . D 4 HOH A 306 706 769 HOH HOH . D 4 HOH A 307 707 770 HOH HOH . D 4 HOH A 308 708 766 HOH HOH . D 4 HOH A 309 709 772 HOH HOH . D 4 HOH A 310 710 773 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.504 _atom_site.Cartn_y 0.127 _atom_site.Cartn_z 15.354 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 6.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #