data_5YWH
#
_model_server_result.job_id            DEXLz-1NsHVSxBrdt0hNhA 
_model_server_result.datetime_utc      '2024-10-10 21:25:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ywh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    5YWH 
#
_exptl.entry_id    5YWH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              55.845 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE (III) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5YWH 
_cell.length_a            95.745 
_cell.length_b            95.745 
_cell.length_c            196.595 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5YWH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 401 A CYS 401 1_555 A SG CYS 416 A CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 B SG CYS 401 B CYS 401 1_555 B SG CYS 416 B CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc1 A NE2 HIS 226 A HIS 226 1_555 C FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc2 A NE2 HIS 308 A HIS 308 1_555 C FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? 
metalc ? metalc3 A OE1 GLU 394 A GLU 394 1_555 C FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc4 C FE FE . A FE 501 1_555 D O12 92U . A 92U 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc5 C FE FE . A FE 501 1_555 D O17 92U . A 92U 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? 
metalc ? metalc6 B NE2 HIS 226 B HIS 226 1_555 E FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? 
metalc ? metalc7 B NE2 HIS 308 B HIS 308 1_555 E FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? 
metalc ? metalc8 B OE1 GLU 394 B GLU 394 1_555 E FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.868 ? 
metalc ? metalc9 E FE FE . B FE 501 1_555 F O12 92U . B 92U 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? 
metalc ? metalc10 E FE FE . B FE 501 1_555 F O17 92U . B 92U 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
#
_chem_comp.formula           'Fe 3' 
_chem_comp.formula_weight    55.845 
_chem_comp.id                FE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE (III) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5YWH 
_atom_sites.fract_transf_matrix[1][1]    0.010444 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010444 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005087 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FE A 1 501 498 FE FE . 
D 3 92U A 1 502 501 92U LIG . 
E 2 FE B 1 501 498 FE FE . 
F 3 92U B 1 502 501 92U LIG . 
G 4 HOH A 1 601 47 HOH HOH . 
G 4 HOH A 2 602 138 HOH HOH . 
G 4 HOH A 3 603 46 HOH HOH . 
G 4 HOH A 4 604 122 HOH HOH . 
G 4 HOH A 5 605 52 HOH HOH . 
G 4 HOH A 6 606 9 HOH HOH . 
G 4 HOH A 7 607 49 HOH HOH . 
G 4 HOH A 8 608 75 HOH HOH . 
G 4 HOH A 9 609 83 HOH HOH . 
G 4 HOH A 10 610 59 HOH HOH . 
G 4 HOH A 11 611 134 HOH HOH . 
G 4 HOH A 12 612 119 HOH HOH . 
G 4 HOH A 13 613 16 HOH HOH . 
G 4 HOH A 14 614 135 HOH HOH . 
G 4 HOH A 15 615 23 HOH HOH . 
G 4 HOH A 16 616 29 HOH HOH . 
G 4 HOH A 17 617 6 HOH HOH . 
G 4 HOH A 18 618 43 HOH HOH . 
G 4 HOH A 19 619 13 HOH HOH . 
G 4 HOH A 20 620 36 HOH HOH . 
G 4 HOH A 21 621 40 HOH HOH . 
G 4 HOH A 22 622 15 HOH HOH . 
G 4 HOH A 23 623 28 HOH HOH . 
G 4 HOH A 24 624 35 HOH HOH . 
G 4 HOH A 25 625 34 HOH HOH . 
G 4 HOH A 26 626 42 HOH HOH . 
G 4 HOH A 27 627 33 HOH HOH . 
G 4 HOH A 28 628 30 HOH HOH . 
G 4 HOH A 29 629 39 HOH HOH . 
G 4 HOH A 30 630 32 HOH HOH . 
G 4 HOH A 31 631 4 HOH HOH . 
G 4 HOH A 32 632 5 HOH HOH . 
G 4 HOH A 33 633 50 HOH HOH . 
G 4 HOH A 34 634 26 HOH HOH . 
G 4 HOH A 35 635 71 HOH HOH . 
G 4 HOH A 36 636 31 HOH HOH . 
G 4 HOH A 37 637 82 HOH HOH . 
G 4 HOH A 38 638 76 HOH HOH . 
G 4 HOH A 39 639 99 HOH HOH . 
G 4 HOH A 40 640 84 HOH HOH . 
G 4 HOH A 41 641 65 HOH HOH . 
G 4 HOH A 42 642 54 HOH HOH . 
G 4 HOH A 43 643 97 HOH HOH . 
G 4 HOH A 44 644 77 HOH HOH . 
G 4 HOH A 45 645 44 HOH HOH . 
G 4 HOH A 46 646 25 HOH HOH . 
G 4 HOH A 47 647 79 HOH HOH . 
G 4 HOH A 48 648 139 HOH HOH . 
G 4 HOH A 49 649 53 HOH HOH . 
G 4 HOH A 50 650 141 HOH HOH . 
G 4 HOH A 51 651 69 HOH HOH . 
G 4 HOH A 52 652 132 HOH HOH . 
G 4 HOH A 53 653 115 HOH HOH . 
G 4 HOH A 54 654 51 HOH HOH . 
G 4 HOH A 55 655 64 HOH HOH . 
G 4 HOH A 56 656 102 HOH HOH . 
G 4 HOH A 57 657 63 HOH HOH . 
H 4 HOH B 1 601 3 HOH HOH . 
H 4 HOH B 2 602 21 HOH HOH . 
H 4 HOH B 3 603 24 HOH HOH . 
H 4 HOH B 4 604 8 HOH HOH . 
H 4 HOH B 5 605 38 HOH HOH . 
H 4 HOH B 6 606 92 HOH HOH . 
H 4 HOH B 7 607 80 HOH HOH . 
H 4 HOH B 8 608 88 HOH HOH . 
H 4 HOH B 9 609 1 HOH HOH . 
H 4 HOH B 10 610 22 HOH HOH . 
H 4 HOH B 11 611 55 HOH HOH . 
H 4 HOH B 12 612 45 HOH HOH . 
H 4 HOH B 13 613 94 HOH HOH . 
H 4 HOH B 14 614 66 HOH HOH . 
H 4 HOH B 15 615 10 HOH HOH . 
H 4 HOH B 16 616 128 HOH HOH . 
H 4 HOH B 17 617 27 HOH HOH . 
H 4 HOH B 18 618 105 HOH HOH . 
H 4 HOH B 19 619 14 HOH HOH . 
H 4 HOH B 20 620 111 HOH HOH . 
H 4 HOH B 21 621 7 HOH HOH . 
H 4 HOH B 22 622 78 HOH HOH . 
H 4 HOH B 23 623 12 HOH HOH . 
H 4 HOH B 24 624 95 HOH HOH . 
H 4 HOH B 25 625 72 HOH HOH . 
H 4 HOH B 26 626 70 HOH HOH . 
H 4 HOH B 27 627 37 HOH HOH . 
H 4 HOH B 28 628 85 HOH HOH . 
H 4 HOH B 29 629 11 HOH HOH . 
H 4 HOH B 30 630 110 HOH HOH . 
H 4 HOH B 31 631 58 HOH HOH . 
H 4 HOH B 32 632 17 HOH HOH . 
H 4 HOH B 33 633 81 HOH HOH . 
H 4 HOH B 34 634 73 HOH HOH . 
H 4 HOH B 35 635 57 HOH HOH . 
H 4 HOH B 36 636 68 HOH HOH . 
H 4 HOH B 37 637 120 HOH HOH . 
H 4 HOH B 38 638 116 HOH HOH . 
H 4 HOH B 39 639 86 HOH HOH . 
H 4 HOH B 40 640 60 HOH HOH . 
H 4 HOH B 41 641 124 HOH HOH . 
H 4 HOH B 42 642 114 HOH HOH . 
H 4 HOH B 43 643 67 HOH HOH . 
H 4 HOH B 44 644 19 HOH HOH . 
H 4 HOH B 45 645 20 HOH HOH . 
H 4 HOH B 46 646 61 HOH HOH . 
H 4 HOH B 47 647 74 HOH HOH . 
H 4 HOH B 48 648 93 HOH HOH . 
H 4 HOH B 49 649 108 HOH HOH . 
H 4 HOH B 50 650 121 HOH HOH . 
H 4 HOH B 51 651 127 HOH HOH . 
H 4 HOH B 52 652 129 HOH HOH . 
H 4 HOH B 53 653 89 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           FE 
_atom_site.label_atom_id         FE 
_atom_site.label_comp_id         FE 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               24.061 
_atom_site.Cartn_y               9.387 
_atom_site.Cartn_z               -18.914 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        9.83 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          FE 
_atom_site.auth_comp_id          FE 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#