data_5YYF # _model_server_result.job_id FrjEHdvzSvJ7_Hdbib-hlA _model_server_result.datetime_utc '2024-10-28 16:19:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5yyf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":202}' # _entry.id 5YYF # _exptl.entry_id 5YYF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.86 _cell.angle_gamma 90 _cell.entry_id 5YYF _cell.length_a 91.536 _cell.length_b 43.992 _cell.length_c 89.053 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5YYF _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,J,K 1 1 C,D,H,I,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C1 PHQ 1 B PHQ 4 1_555 B N GLN 2 B GLN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale2 B C LYS 6 B LYS 9 1_555 B N NH2 7 B NH2 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.391 ? covale ? covale3 B NZ LYS 6 B LYS 9 1_555 G C1 FOA . B FOA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.398 ? covale ? covale4 D C1 PHQ 1 D PHQ 4 1_555 D N GLN 2 D GLN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.304 ? covale ? covale5 D C LYS 6 D LYS 9 1_555 D N NH2 7 D NH2 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.39 ? covale ? covale6 D NZ LYS 6 D LYS 9 1_555 I C1 FOA . D FOA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.4 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 322 n n S O2 SO4 doub 323 n n S O3 SO4 sing 324 n n S O4 SO4 sing 325 n n # _atom_sites.entry_id 5YYF _atom_sites.fract_transf_matrix[1][1] 0.010925 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00112 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022731 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 201 5 SO4 SO4 . F 3 SO4 A 1 202 7 SO4 SO4 . G 4 FOA B 1 101 101 FOA FOA . H 3 SO4 C 1 201 6 SO4 SO4 . I 4 FOA D 1 101 101 FOA FOA . J 5 HOH A 1 301 55 HOH HOH . J 5 HOH A 2 302 268 HOH HOH . J 5 HOH A 3 303 108 HOH HOH . J 5 HOH A 4 304 130 HOH HOH . J 5 HOH A 5 305 112 HOH HOH . J 5 HOH A 6 306 265 HOH HOH . J 5 HOH A 7 307 179 HOH HOH . J 5 HOH A 8 308 1 HOH HOH . J 5 HOH A 9 309 78 HOH HOH . J 5 HOH A 10 310 19 HOH HOH . J 5 HOH A 11 311 207 HOH HOH . J 5 HOH A 12 312 155 HOH HOH . J 5 HOH A 13 313 2 HOH HOH . J 5 HOH A 14 314 208 HOH HOH . J 5 HOH A 15 315 259 HOH HOH . J 5 HOH A 16 316 68 HOH HOH . J 5 HOH A 17 317 44 HOH HOH . J 5 HOH A 18 318 62 HOH HOH . J 5 HOH A 19 319 66 HOH HOH . J 5 HOH A 20 320 163 HOH HOH . J 5 HOH A 21 321 103 HOH HOH . J 5 HOH A 22 322 24 HOH HOH . J 5 HOH A 23 323 12 HOH HOH . J 5 HOH A 24 324 131 HOH HOH . J 5 HOH A 25 325 122 HOH HOH . J 5 HOH A 26 326 11 HOH HOH . J 5 HOH A 27 327 15 HOH HOH . J 5 HOH A 28 328 18 HOH HOH . J 5 HOH A 29 329 235 HOH HOH . J 5 HOH A 30 330 137 HOH HOH . J 5 HOH A 31 331 133 HOH HOH . J 5 HOH A 32 332 183 HOH HOH . J 5 HOH A 33 333 14 HOH HOH . J 5 HOH A 34 334 13 HOH HOH . J 5 HOH A 35 335 126 HOH HOH . J 5 HOH A 36 336 35 HOH HOH . J 5 HOH A 37 337 42 HOH HOH . J 5 HOH A 38 338 245 HOH HOH . J 5 HOH A 39 339 65 HOH HOH . J 5 HOH A 40 340 83 HOH HOH . J 5 HOH A 41 341 77 HOH HOH . J 5 HOH A 42 342 204 HOH HOH . J 5 HOH A 43 343 139 HOH HOH . J 5 HOH A 44 344 6 HOH HOH . J 5 HOH A 45 345 45 HOH HOH . J 5 HOH A 46 346 39 HOH HOH . J 5 HOH A 47 347 120 HOH HOH . J 5 HOH A 48 348 140 HOH HOH . J 5 HOH A 49 349 182 HOH HOH . J 5 HOH A 50 350 124 HOH HOH . J 5 HOH A 51 351 29 HOH HOH . J 5 HOH A 52 352 158 HOH HOH . J 5 HOH A 53 353 173 HOH HOH . J 5 HOH A 54 354 82 HOH HOH . J 5 HOH A 55 355 214 HOH HOH . J 5 HOH A 56 356 244 HOH HOH . J 5 HOH A 57 357 7 HOH HOH . J 5 HOH A 58 358 26 HOH HOH . J 5 HOH A 59 359 221 HOH HOH . J 5 HOH A 60 360 47 HOH HOH . J 5 HOH A 61 361 5 HOH HOH . J 5 HOH A 62 362 71 HOH HOH . J 5 HOH A 63 363 227 HOH HOH . J 5 HOH A 64 364 144 HOH HOH . J 5 HOH A 65 365 234 HOH HOH . J 5 HOH A 66 366 153 HOH HOH . J 5 HOH A 67 367 4 HOH HOH . J 5 HOH A 68 368 22 HOH HOH . J 5 HOH A 69 369 116 HOH HOH . J 5 HOH A 70 370 211 HOH HOH . J 5 HOH A 71 371 121 HOH HOH . J 5 HOH A 72 372 237 HOH HOH . J 5 HOH A 73 373 51 HOH HOH . J 5 HOH A 74 374 86 HOH HOH . J 5 HOH A 75 375 36 HOH HOH . J 5 HOH A 76 376 17 HOH HOH . J 5 HOH A 77 377 109 HOH HOH . J 5 HOH A 78 378 185 HOH HOH . J 5 HOH A 79 379 152 HOH HOH . J 5 HOH A 80 380 187 HOH HOH . J 5 HOH A 81 381 171 HOH HOH . J 5 HOH A 82 382 30 HOH HOH . J 5 HOH A 83 383 9 HOH HOH . J 5 HOH A 84 384 243 HOH HOH . J 5 HOH A 85 385 151 HOH HOH . J 5 HOH A 86 386 162 HOH HOH . J 5 HOH A 87 387 134 HOH HOH . J 5 HOH A 88 388 31 HOH HOH . J 5 HOH A 89 389 192 HOH HOH . J 5 HOH A 90 390 184 HOH HOH . J 5 HOH A 91 391 252 HOH HOH . J 5 HOH A 92 392 50 HOH HOH . J 5 HOH A 93 393 125 HOH HOH . J 5 HOH A 94 394 128 HOH HOH . J 5 HOH A 95 395 81 HOH HOH . J 5 HOH A 96 396 3 HOH HOH . J 5 HOH A 97 397 229 HOH HOH . J 5 HOH A 98 398 212 HOH HOH . J 5 HOH A 99 399 84 HOH HOH . J 5 HOH A 100 400 223 HOH HOH . J 5 HOH A 101 401 106 HOH HOH . J 5 HOH A 102 402 23 HOH HOH . J 5 HOH A 103 403 263 HOH HOH . J 5 HOH A 104 404 257 HOH HOH . J 5 HOH A 105 405 99 HOH HOH . J 5 HOH A 106 406 205 HOH HOH . J 5 HOH A 107 407 102 HOH HOH . J 5 HOH A 108 408 69 HOH HOH . J 5 HOH A 109 409 64 HOH HOH . J 5 HOH A 110 410 159 HOH HOH . J 5 HOH A 111 411 216 HOH HOH . J 5 HOH A 112 412 217 HOH HOH . J 5 HOH A 113 413 10 HOH HOH . J 5 HOH A 114 414 175 HOH HOH . J 5 HOH A 115 415 138 HOH HOH . J 5 HOH A 116 416 73 HOH HOH . J 5 HOH A 117 417 110 HOH HOH . J 5 HOH A 118 418 238 HOH HOH . J 5 HOH A 119 419 213 HOH HOH . J 5 HOH A 120 420 262 HOH HOH . J 5 HOH A 121 421 273 HOH HOH . J 5 HOH A 122 422 264 HOH HOH . J 5 HOH A 123 423 93 HOH HOH . J 5 HOH A 124 424 230 HOH HOH . J 5 HOH A 125 425 145 HOH HOH . J 5 HOH A 126 426 88 HOH HOH . J 5 HOH A 127 427 269 HOH HOH . J 5 HOH A 128 428 275 HOH HOH . J 5 HOH A 129 429 271 HOH HOH . J 5 HOH A 130 430 254 HOH HOH . J 5 HOH A 131 431 149 HOH HOH . J 5 HOH A 132 432 256 HOH HOH . J 5 HOH A 133 433 96 HOH HOH . J 5 HOH A 134 434 270 HOH HOH . J 5 HOH A 135 435 169 HOH HOH . J 5 HOH A 136 436 272 HOH HOH . J 5 HOH A 137 437 114 HOH HOH . J 5 HOH A 138 438 123 HOH HOH . J 5 HOH A 139 439 25 HOH HOH . J 5 HOH A 140 440 33 HOH HOH . J 5 HOH A 141 441 209 HOH HOH . J 5 HOH A 142 442 206 HOH HOH . J 5 HOH A 143 443 111 HOH HOH . J 5 HOH A 144 444 274 HOH HOH . J 5 HOH A 145 445 226 HOH HOH . J 5 HOH A 146 446 233 HOH HOH . J 5 HOH A 147 447 195 HOH HOH . J 5 HOH A 148 448 199 HOH HOH . J 5 HOH A 149 449 141 HOH HOH . J 5 HOH A 150 450 95 HOH HOH . J 5 HOH A 151 451 220 HOH HOH . J 5 HOH A 152 452 160 HOH HOH . J 5 HOH A 153 453 85 HOH HOH . J 5 HOH A 154 454 170 HOH HOH . J 5 HOH A 155 455 16 HOH HOH . J 5 HOH A 156 456 74 HOH HOH . J 5 HOH A 157 457 177 HOH HOH . J 5 HOH A 158 458 101 HOH HOH . J 5 HOH A 159 459 49 HOH HOH . J 5 HOH A 160 460 258 HOH HOH . J 5 HOH A 161 461 105 HOH HOH . J 5 HOH A 162 462 172 HOH HOH . K 5 HOH B 1 201 181 HOH HOH . K 5 HOH B 2 202 219 HOH HOH . K 5 HOH B 3 203 60 HOH HOH . K 5 HOH B 4 204 189 HOH HOH . K 5 HOH B 5 205 129 HOH HOH . K 5 HOH B 6 206 198 HOH HOH . K 5 HOH B 7 207 148 HOH HOH . K 5 HOH B 8 208 154 HOH HOH . L 5 HOH C 1 301 92 HOH HOH . L 5 HOH C 2 302 250 HOH HOH . L 5 HOH C 3 303 248 HOH HOH . L 5 HOH C 4 304 136 HOH HOH . L 5 HOH C 5 305 203 HOH HOH . L 5 HOH C 6 306 267 HOH HOH . L 5 HOH C 7 307 167 HOH HOH . L 5 HOH C 8 308 38 HOH HOH . L 5 HOH C 9 309 113 HOH HOH . L 5 HOH C 10 310 241 HOH HOH . L 5 HOH C 11 311 266 HOH HOH . L 5 HOH C 12 312 63 HOH HOH . L 5 HOH C 13 313 118 HOH HOH . L 5 HOH C 14 314 37 HOH HOH . L 5 HOH C 15 315 127 HOH HOH . L 5 HOH C 16 316 115 HOH HOH . L 5 HOH C 17 317 197 HOH HOH . L 5 HOH C 18 318 80 HOH HOH . L 5 HOH C 19 319 27 HOH HOH . L 5 HOH C 20 320 157 HOH HOH . L 5 HOH C 21 321 255 HOH HOH . L 5 HOH C 22 322 249 HOH HOH . L 5 HOH C 23 323 91 HOH HOH . L 5 HOH C 24 324 98 HOH HOH . L 5 HOH C 25 325 57 HOH HOH . L 5 HOH C 26 326 21 HOH HOH . L 5 HOH C 27 327 242 HOH HOH . L 5 HOH C 28 328 54 HOH HOH . L 5 HOH C 29 329 135 HOH HOH . L 5 HOH C 30 330 52 HOH HOH . L 5 HOH C 31 331 59 HOH HOH . L 5 HOH C 32 332 43 HOH HOH . L 5 HOH C 33 333 150 HOH HOH . L 5 HOH C 34 334 156 HOH HOH . L 5 HOH C 35 335 146 HOH HOH . L 5 HOH C 36 336 46 HOH HOH . L 5 HOH C 37 337 56 HOH HOH . L 5 HOH C 38 338 190 HOH HOH . L 5 HOH C 39 339 48 HOH HOH . L 5 HOH C 40 340 40 HOH HOH . L 5 HOH C 41 341 201 HOH HOH . L 5 HOH C 42 342 193 HOH HOH . L 5 HOH C 43 343 75 HOH HOH . L 5 HOH C 44 344 132 HOH HOH . L 5 HOH C 45 345 67 HOH HOH . L 5 HOH C 46 346 215 HOH HOH . L 5 HOH C 47 347 76 HOH HOH . L 5 HOH C 48 348 166 HOH HOH . L 5 HOH C 49 349 94 HOH HOH . L 5 HOH C 50 350 260 HOH HOH . L 5 HOH C 51 351 89 HOH HOH . L 5 HOH C 52 352 147 HOH HOH . L 5 HOH C 53 353 70 HOH HOH . L 5 HOH C 54 354 20 HOH HOH . L 5 HOH C 55 355 8 HOH HOH . L 5 HOH C 56 356 79 HOH HOH . L 5 HOH C 57 357 61 HOH HOH . L 5 HOH C 58 358 53 HOH HOH . L 5 HOH C 59 359 261 HOH HOH . L 5 HOH C 60 360 104 HOH HOH . L 5 HOH C 61 361 161 HOH HOH . L 5 HOH C 62 362 165 HOH HOH . L 5 HOH C 63 363 194 HOH HOH . L 5 HOH C 64 364 222 HOH HOH . L 5 HOH C 65 365 253 HOH HOH . L 5 HOH C 66 366 97 HOH HOH . L 5 HOH C 67 367 188 HOH HOH . L 5 HOH C 68 368 178 HOH HOH . L 5 HOH C 69 369 236 HOH HOH . L 5 HOH C 70 370 228 HOH HOH . L 5 HOH C 71 371 218 HOH HOH . L 5 HOH C 72 372 239 HOH HOH . L 5 HOH C 73 373 119 HOH HOH . L 5 HOH C 74 374 277 HOH HOH . L 5 HOH C 75 375 72 HOH HOH . L 5 HOH C 76 376 186 HOH HOH . L 5 HOH C 77 377 251 HOH HOH . L 5 HOH C 78 378 180 HOH HOH . L 5 HOH C 79 379 202 HOH HOH . L 5 HOH C 80 380 276 HOH HOH . L 5 HOH C 81 381 225 HOH HOH . L 5 HOH C 82 382 278 HOH HOH . L 5 HOH C 83 383 143 HOH HOH . L 5 HOH C 84 384 107 HOH HOH . L 5 HOH C 85 385 231 HOH HOH . L 5 HOH C 86 386 100 HOH HOH . L 5 HOH C 87 387 196 HOH HOH . L 5 HOH C 88 388 200 HOH HOH . L 5 HOH C 89 389 246 HOH HOH . L 5 HOH C 90 390 191 HOH HOH . L 5 HOH C 91 391 117 HOH HOH . L 5 HOH C 92 392 164 HOH HOH . L 5 HOH C 93 393 224 HOH HOH . L 5 HOH C 94 394 210 HOH HOH . L 5 HOH C 95 395 247 HOH HOH . L 5 HOH C 96 396 142 HOH HOH . L 5 HOH C 97 397 240 HOH HOH . M 5 HOH D 1 201 87 HOH HOH . M 5 HOH D 2 202 28 HOH HOH . M 5 HOH D 3 203 41 HOH HOH . M 5 HOH D 4 204 34 HOH HOH . M 5 HOH D 5 205 32 HOH HOH . M 5 HOH D 6 206 90 HOH HOH . M 5 HOH D 7 207 58 HOH HOH . M 5 HOH D 8 208 168 HOH HOH . M 5 HOH D 9 209 232 HOH HOH . M 5 HOH D 10 210 176 HOH HOH . M 5 HOH D 11 211 174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 3 0.905 -10.816 28.852 1 96.01 ? S SO4 202 A 1 HETATM 2 O O1 SO4 . . . F 3 2.241 -10.569 28.316 1 58.98 ? O1 SO4 202 A 1 HETATM 3 O O2 SO4 . . . F 3 0.269 -11.892 28.097 1 67.53 ? O2 SO4 202 A 1 HETATM 4 O O3 SO4 . . . F 3 1.009 -11.202 30.257 1 53.99 ? O3 SO4 202 A 1 HETATM 5 O O4 SO4 . . . F 3 0.103 -9.6 28.736 1 57.14 ? O4 SO4 202 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #