data_5YZ1
#
_model_server_result.job_id            zMIGh4nisYROILLKxtegkw 
_model_server_result.datetime_utc      '2024-11-29 10:21:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5yz1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    5YZ1 
#
_exptl.entry_id    5YZ1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5YZ1 
_cell.length_a            46.201 
_cell.length_b            55.844 
_cell.length_c            133.261 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5YZ1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 246 n n 
C1 C2 PEG sing 247 n n 
C1 H11 PEG sing 248 n n 
C1 H12 PEG sing 249 n n 
O1 HO1 PEG sing 250 n n 
C2 O2 PEG sing 251 n n 
C2 H21 PEG sing 252 n n 
C2 H22 PEG sing 253 n n 
O2 C3 PEG sing 254 n n 
C3 C4 PEG sing 255 n n 
C3 H31 PEG sing 256 n n 
C3 H32 PEG sing 257 n n 
C4 O4 PEG sing 258 n n 
C4 H41 PEG sing 259 n n 
C4 H42 PEG sing 260 n n 
O4 HO4 PEG sing 261 n n 
#
_atom_sites.entry_id                     5YZ1 
_atom_sites.fract_transf_matrix[1][1]    0.021645 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017907 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007504 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PEG A 1 201 35 PEG PEG . 
D 2 PEG B 1 201 36 PEG PEG . 
E 3 EDO B 1 202 5 EDO EDO . 
F 4 HOH A 1 301 229 HOH HOH . 
F 4 HOH A 2 302 203 HOH HOH . 
F 4 HOH A 3 303 206 HOH HOH . 
F 4 HOH A 4 304 202 HOH HOH . 
F 4 HOH A 5 305 189 HOH HOH . 
F 4 HOH A 6 306 215 HOH HOH . 
F 4 HOH A 7 307 201 HOH HOH . 
F 4 HOH A 8 308 196 HOH HOH . 
F 4 HOH A 9 309 195 HOH HOH . 
F 4 HOH A 10 310 183 HOH HOH . 
F 4 HOH A 11 311 194 HOH HOH . 
F 4 HOH A 12 312 200 HOH HOH . 
F 4 HOH A 13 313 209 HOH HOH . 
F 4 HOH A 14 314 190 HOH HOH . 
F 4 HOH A 15 315 220 HOH HOH . 
F 4 HOH A 16 316 223 HOH HOH . 
F 4 HOH A 17 317 185 HOH HOH . 
F 4 HOH A 18 318 187 HOH HOH . 
F 4 HOH A 19 319 184 HOH HOH . 
F 4 HOH A 20 320 197 HOH HOH . 
F 4 HOH A 21 321 208 HOH HOH . 
F 4 HOH A 22 322 191 HOH HOH . 
F 4 HOH A 23 323 181 HOH HOH . 
F 4 HOH A 24 324 193 HOH HOH . 
F 4 HOH A 25 325 192 HOH HOH . 
F 4 HOH A 26 326 199 HOH HOH . 
F 4 HOH A 27 327 188 HOH HOH . 
F 4 HOH A 28 328 204 HOH HOH . 
F 4 HOH A 29 329 224 HOH HOH . 
F 4 HOH A 30 330 217 HOH HOH . 
F 4 HOH A 31 331 205 HOH HOH . 
F 4 HOH A 32 332 213 HOH HOH . 
F 4 HOH A 33 333 207 HOH HOH . 
F 4 HOH A 34 334 210 HOH HOH . 
F 4 HOH A 35 335 186 HOH HOH . 
F 4 HOH A 36 336 218 HOH HOH . 
F 4 HOH A 37 337 225 HOH HOH . 
F 4 HOH A 38 338 216 HOH HOH . 
F 4 HOH A 39 339 212 HOH HOH . 
F 4 HOH A 40 340 221 HOH HOH . 
F 4 HOH A 41 341 182 HOH HOH . 
F 4 HOH A 42 342 227 HOH HOH . 
F 4 HOH A 43 343 211 HOH HOH . 
F 4 HOH A 44 344 228 HOH HOH . 
F 4 HOH A 45 345 226 HOH HOH . 
F 4 HOH A 46 346 214 HOH HOH . 
F 4 HOH A 47 347 222 HOH HOH . 
G 4 HOH B 1 301 188 HOH HOH . 
G 4 HOH B 2 302 218 HOH HOH . 
G 4 HOH B 3 303 219 HOH HOH . 
G 4 HOH B 4 304 203 HOH HOH . 
G 4 HOH B 5 305 210 HOH HOH . 
G 4 HOH B 6 306 215 HOH HOH . 
G 4 HOH B 7 307 212 HOH HOH . 
G 4 HOH B 8 308 233 HOH HOH . 
G 4 HOH B 9 309 207 HOH HOH . 
G 4 HOH B 10 310 208 HOH HOH . 
G 4 HOH B 11 311 209 HOH HOH . 
G 4 HOH B 12 312 211 HOH HOH . 
G 4 HOH B 13 313 191 HOH HOH . 
G 4 HOH B 14 314 202 HOH HOH . 
G 4 HOH B 15 315 192 HOH HOH . 
G 4 HOH B 16 316 193 HOH HOH . 
G 4 HOH B 17 317 181 HOH HOH . 
G 4 HOH B 18 318 182 HOH HOH . 
G 4 HOH B 19 319 195 HOH HOH . 
G 4 HOH B 20 320 238 HOH HOH . 
G 4 HOH B 21 321 204 HOH HOH . 
G 4 HOH B 22 322 189 HOH HOH . 
G 4 HOH B 23 323 217 HOH HOH . 
G 4 HOH B 24 324 198 HOH HOH . 
G 4 HOH B 25 325 198 HOH HOH . 
G 4 HOH B 26 326 184 HOH HOH . 
G 4 HOH B 27 327 201 HOH HOH . 
G 4 HOH B 28 328 196 HOH HOH . 
G 4 HOH B 29 329 183 HOH HOH . 
G 4 HOH B 30 330 224 HOH HOH . 
G 4 HOH B 31 331 222 HOH HOH . 
G 4 HOH B 32 332 185 HOH HOH . 
G 4 HOH B 33 333 197 HOH HOH . 
G 4 HOH B 34 334 221 HOH HOH . 
G 4 HOH B 35 335 219 HOH HOH . 
G 4 HOH B 36 336 214 HOH HOH . 
G 4 HOH B 37 337 213 HOH HOH . 
G 4 HOH B 38 338 225 HOH HOH . 
G 4 HOH B 39 339 194 HOH HOH . 
G 4 HOH B 40 340 186 HOH HOH . 
G 4 HOH B 41 341 190 HOH HOH . 
G 4 HOH B 42 342 200 HOH HOH . 
G 4 HOH B 43 343 206 HOH HOH . 
G 4 HOH B 44 344 216 HOH HOH . 
G 4 HOH B 45 345 187 HOH HOH . 
G 4 HOH B 46 346 205 HOH HOH . 
G 4 HOH B 47 347 237 HOH HOH . 
G 4 HOH B 48 348 226 HOH HOH . 
G 4 HOH B 49 349 199 HOH HOH . 
G 4 HOH B 50 350 223 HOH HOH . 
G 4 HOH B 51 351 229 HOH HOH . 
G 4 HOH B 52 352 220 HOH HOH . 
G 4 HOH B 53 353 228 HOH HOH . 
G 4 HOH B 54 354 227 HOH HOH . 
G 4 HOH B 55 355 236 HOH HOH . 
G 4 HOH B 56 356 235 HOH HOH . 
G 4 HOH B 57 357 234 HOH HOH . 
G 4 HOH B 58 358 232 HOH HOH . 
G 4 HOH B 59 359 230 HOH HOH . 
G 4 HOH B 60 360 231 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . D 2 19.508 -10.065 -18.581 1 68.82 ? C1 PEG 201 B 1 
HETATM 2 O O1 PEG . . . D 2 18.391 -10.939 -18.298 1 60.81 ? O1 PEG 201 B 1 
HETATM 3 C C2 PEG . . . D 2 20.452 -10.557 -19.685 1 57.47 ? C2 PEG 201 B 1 
HETATM 4 O O2 PEG . . . D 2 21.361 -9.529 -20.193 1 59.11 ? O2 PEG 201 B 1 
HETATM 5 C C3 PEG . . . D 2 22.772 -9.592 -19.886 1 57.65 ? C3 PEG 201 B 1 
HETATM 6 C C4 PEG . . . D 2 23.431 -8.259 -19.485 1 59.06 ? C4 PEG 201 B 1 
HETATM 7 O O4 PEG . . . D 2 24.092 -8.158 -18.195 1 61.06 ? O4 PEG 201 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           7 
#