data_5YZ8
#
_model_server_result.job_id            ZzN6yK1vRiwxum9ckTjuXQ 
_model_server_result.datetime_utc      '2024-11-13 04:52:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5yz8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":303}' 
#
_entry.id    5YZ8 
#
_exptl.entry_id    5YZ8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              35.453 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHLORIDE ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5YZ8 
_cell.length_a            108.072 
_cell.length_b            108.072 
_cell.length_c            224.069 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5YZ8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 I N N 
? 4 J N N 
? 4 M N N 
? 4 P N N 
? 4 S N N 
? 4 V N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 53 A THR 53 1_555 H MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? 
metalc ? metalc2 G O1G ANP . A ANP 301 1_555 H MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? 
metalc ? metalc3 G O1B ANP . A ANP 301 1_555 H MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc4 H MG MG . A MG 302 1_555 Y O HOH . A HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? 
metalc ? metalc5 H MG MG . A MG 302 1_555 Y O HOH . A HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? 
metalc ? metalc6 B OG1 THR 53 B THR 53 1_555 L MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? 
metalc ? metalc7 K O1G ANP . B ANP 301 1_555 L MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? 
metalc ? metalc8 K O1B ANP . B ANP 301 1_555 L MG MG . B MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? 
metalc ? metalc9 L MG MG . B MG 302 1_555 Z O HOH . B HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc10 L MG MG . B MG 302 1_555 Z O HOH . B HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc11 C OG1 THR 53 C THR 53 1_555 O MG MG . C MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc12 N O2G ANP . C ANP 301 1_555 O MG MG . C MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.882 ? 
metalc ? metalc13 N O2B ANP . C ANP 301 1_555 O MG MG . C MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
metalc ? metalc14 O MG MG . C MG 302 1_555 AA O HOH . C HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? 
metalc ? metalc15 O MG MG . C MG 302 1_555 AA O HOH . C HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc16 D OG1 THR 53 D THR 53 1_555 R MG MG . D MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? 
metalc ? metalc17 Q O3G ANP . D ANP 301 1_555 R MG MG . D MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.769 ? 
metalc ? metalc18 Q O2B ANP . D ANP 301 1_555 R MG MG . D MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc19 R MG MG . D MG 302 1_555 BA O HOH . D HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? 
metalc ? metalc20 R MG MG . D MG 302 1_555 BA O HOH . D HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc21 E OG1 THR 53 E THR 53 1_555 U MG MG . E MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc22 T O2G ANP . E ANP 301 1_555 U MG MG . E MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.86 ? 
metalc ? metalc23 T O2B ANP . E ANP 301 1_555 U MG MG . E MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? 
metalc ? metalc24 U MG MG . E MG 302 1_555 CA O HOH . E HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? 
metalc ? metalc25 U MG MG . E MG 302 1_555 CA O HOH . E HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc26 F OG1 THR 53 F THR 53 1_555 X MG MG . F MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? 
metalc ? metalc27 W O3G ANP . F ANP 301 1_555 X MG MG . F MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? 
metalc ? metalc28 W O1B ANP . F ANP 301 1_555 X MG MG . F MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? 
metalc ? metalc29 X MG MG . F MG 302 1_555 DA O HOH . F HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc30 X MG MG . F MG 302 1_555 DA O HOH . F HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
#
_chem_comp.formula           'Cl -1' 
_chem_comp.formula_weight    35.453 
_chem_comp.id                CL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHLORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5YZ8 
_atom_sites.fract_transf_matrix[1][1]    0.009253 
_atom_sites.fract_transf_matrix[1][2]    0.005342 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010685 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004463 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 ANP A 1 301 301 ANP ANP . 
H 3 MG A 1 302 302 MG MG . 
I 4 CL A 1 303 303 CL CL . 
J 4 CL A 1 304 304 CL CL . 
K 2 ANP B 1 301 301 ANP ANP . 
L 3 MG B 1 302 302 MG MG . 
M 4 CL B 1 303 303 CL CL . 
N 2 ANP C 1 301 301 ANP ANP . 
O 3 MG C 1 302 302 MG MG . 
P 4 CL C 1 303 303 CL CL . 
Q 2 ANP D 1 301 301 ANP ANP . 
R 3 MG D 1 302 302 MG MG . 
S 4 CL D 1 303 303 CL CL . 
T 2 ANP E 1 301 301 ANP ANP . 
U 3 MG E 1 302 302 MG MG . 
V 4 CL E 1 303 303 CL CL . 
W 2 ANP F 1 301 301 ANP ANP . 
X 3 MG F 1 302 302 MG MG . 
Y 5 HOH A 1 401 401 HOH HOH . 
Y 5 HOH A 2 402 402 HOH HOH . 
Y 5 HOH A 3 403 403 HOH HOH . 
Y 5 HOH A 4 404 404 HOH HOH . 
Y 5 HOH A 5 405 405 HOH HOH . 
Y 5 HOH A 6 406 406 HOH HOH . 
Y 5 HOH A 7 407 407 HOH HOH . 
Z 5 HOH B 1 401 401 HOH HOH . 
Z 5 HOH B 2 402 402 HOH HOH . 
Z 5 HOH B 3 403 403 HOH HOH . 
Z 5 HOH B 4 404 404 HOH HOH . 
Z 5 HOH B 5 405 405 HOH HOH . 
Z 5 HOH B 6 406 406 HOH HOH . 
AA 5 HOH C 1 401 401 HOH HOH . 
AA 5 HOH C 2 402 402 HOH HOH . 
AA 5 HOH C 3 403 403 HOH HOH . 
AA 5 HOH C 4 404 404 HOH HOH . 
AA 5 HOH C 5 405 405 HOH HOH . 
AA 5 HOH C 6 406 406 HOH HOH . 
BA 5 HOH D 1 401 401 HOH HOH . 
BA 5 HOH D 2 402 402 HOH HOH . 
BA 5 HOH D 3 403 403 HOH HOH . 
BA 5 HOH D 4 404 404 HOH HOH . 
BA 5 HOH D 5 405 405 HOH HOH . 
BA 5 HOH D 6 406 406 HOH HOH . 
BA 5 HOH D 7 407 407 HOH HOH . 
CA 5 HOH E 1 401 401 HOH HOH . 
CA 5 HOH E 2 402 402 HOH HOH . 
CA 5 HOH E 3 403 403 HOH HOH . 
CA 5 HOH E 4 404 404 HOH HOH . 
CA 5 HOH E 5 405 405 HOH HOH . 
DA 5 HOH F 1 401 401 HOH HOH . 
DA 5 HOH F 2 402 402 HOH HOH . 
DA 5 HOH F 3 403 403 HOH HOH . 
DA 5 HOH F 4 404 404 HOH HOH . 
DA 5 HOH F 5 405 405 HOH HOH . 
DA 5 HOH F 6 406 406 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CL 
_atom_site.label_atom_id         CL 
_atom_site.label_comp_id         CL 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         V 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -51.411 
_atom_site.Cartn_y               -0.74 
_atom_site.Cartn_z               -16.928 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        48.84 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CL 
_atom_site.auth_comp_id          CL 
_atom_site.auth_seq_id           303 
_atom_site.auth_asym_id          E 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           254 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#