data_5Z12 # _model_server_result.job_id --fzDZcnKJ7RM_amCyCE1g _model_server_result.datetime_utc '2024-11-13 10:36:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5z12 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":501}' # _entry.id 5Z12 # _exptl.entry_id 5Z12 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 438.466 _entity.id 5 _entity.src_method man _entity.type non-polymer _entity.pdbx_description '1-methylethyl 3-[(3,4-difluorophenyl)carbonyl]-1,1-dimethyl-1,2,3,6-tetrahydroazepino[4,5-b]indole-5-carboxylate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Z12 _cell.length_a 89.873 _cell.length_b 95.484 _cell.length_c 116.721 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z12 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G,H,I,L,M,P 1 1 B,C,E,F,J,K,N,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 I N N ? 5 K N N # _chem_comp.formula 'C25 H24 F2 N2 O3' _chem_comp.formula_weight 438.466 _chem_comp.id 33Y _chem_comp.mon_nstd_flag . _chem_comp.name '1-methylethyl 3-[(3,4-difluorophenyl)carbonyl]-1,1-dimethyl-1,2,3,6-tetrahydroazepino[4,5-b]indole-5-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C2 33Y doub 1 n y C3 C4 33Y sing 2 n y C2 C1 33Y sing 3 n y O16 C15 33Y doub 4 n n C31 C29 33Y sing 5 n n C4 N7 33Y sing 6 n y C4 C5 33Y doub 7 n y C29 O17 33Y sing 8 n n C29 C30 33Y sing 9 n n N7 C8 33Y sing 10 n y C1 C6 33Y doub 11 n y C15 O17 33Y sing 12 n n C15 C10 33Y sing 13 n n C5 C6 33Y sing 14 n y C5 C9 33Y sing 15 n y C22 C21 33Y doub 16 n y C22 C23 33Y sing 17 n y F26 C23 33Y sing 18 n n C8 C10 33Y sing 19 n n C8 C9 33Y doub 20 n y C10 C11 33Y doub 21 n n C21 C20 33Y sing 22 n y C9 C14 33Y sing 23 n n C23 C24 33Y doub 24 n y C11 N12 33Y sing 25 n n C28 C14 33Y sing 26 n n C14 C13 33Y sing 27 n n C14 C27 33Y sing 28 n n N12 C13 33Y sing 29 n n N12 C18 33Y sing 30 n n C20 C18 33Y sing 31 n n C20 C25 33Y doub 32 n y C24 C25 33Y sing 33 n y C24 F32 33Y sing 34 n n C18 O19 33Y doub 35 n n C22 H22 33Y sing 36 n n C21 H21 33Y sing 37 n n C25 H25 33Y sing 38 n n C13 H113 33Y sing 39 n n C13 H213 33Y sing 40 n n C27 H127 33Y sing 41 n n C27 H227 33Y sing 42 n n C27 H327 33Y sing 43 n n C28 H128 33Y sing 44 n n C28 H228 33Y sing 45 n n C28 H328 33Y sing 46 n n C6 H6 33Y sing 47 n n C1 H1 33Y sing 48 n n C11 H11 33Y sing 49 n n C29 H29 33Y sing 50 n n C31 H131 33Y sing 51 n n C31 H231 33Y sing 52 n n C31 H331 33Y sing 53 n n C30 H130 33Y sing 54 n n C30 H230 33Y sing 55 n n C30 H330 33Y sing 56 n n N7 HN7 33Y sing 57 n n C3 H3 33Y sing 58 n n C2 H2 33Y sing 59 n n # _atom_sites.entry_id 5Z12 _atom_sites.fract_transf_matrix[1][1] 0.011127 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010473 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008567 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 33Y A 1 501 5 33Y 33Y . J 6 9CR C 1 501 1 9CR 9CR . K 5 33Y D 1 501 6 33Y 33Y . L 6 9CR B 1 501 2 9CR 9CR . M 7 HOH A 1 601 77 HOH HOH . M 7 HOH A 2 602 14 HOH HOH . M 7 HOH A 3 603 14 HOH HOH . M 7 HOH A 4 604 23 HOH HOH . M 7 HOH A 5 605 243 HOH HOH . M 7 HOH A 6 606 123 HOH HOH . M 7 HOH A 7 607 73 HOH HOH . M 7 HOH A 8 608 2 HOH HOH . M 7 HOH A 9 609 108 HOH HOH . M 7 HOH A 10 610 38 HOH HOH . M 7 HOH A 11 611 268 HOH HOH . M 7 HOH A 12 612 152 HOH HOH . M 7 HOH A 13 613 54 HOH HOH . M 7 HOH A 14 614 52 HOH HOH . M 7 HOH A 15 615 214 HOH HOH . M 7 HOH A 16 616 306 HOH HOH . M 7 HOH A 17 617 63 HOH HOH . M 7 HOH A 18 618 61 HOH HOH . M 7 HOH A 19 619 206 HOH HOH . M 7 HOH A 20 620 101 HOH HOH . N 7 HOH C 1 601 32 HOH HOH . N 7 HOH C 2 602 162 HOH HOH . N 7 HOH C 3 603 28 HOH HOH . N 7 HOH C 4 604 105 HOH HOH . N 7 HOH C 5 605 199 HOH HOH . N 7 HOH C 6 606 37 HOH HOH . N 7 HOH C 7 607 105 HOH HOH . N 7 HOH C 8 608 90 HOH HOH . N 7 HOH C 9 609 239 HOH HOH . N 7 HOH C 10 610 134 HOH HOH . N 7 HOH C 11 611 162 HOH HOH . N 7 HOH C 12 612 2 HOH HOH . N 7 HOH C 13 613 161 HOH HOH . N 7 HOH C 14 614 43 HOH HOH . N 7 HOH C 15 615 62 HOH HOH . N 7 HOH C 16 616 51 HOH HOH . N 7 HOH C 17 617 6 HOH HOH . N 7 HOH C 18 618 126 HOH HOH . O 7 HOH D 1 601 7 HOH HOH . O 7 HOH D 2 602 299 HOH HOH . O 7 HOH D 3 603 19 HOH HOH . O 7 HOH D 4 604 131 HOH HOH . O 7 HOH D 5 605 93 HOH HOH . O 7 HOH D 6 606 129 HOH HOH . O 7 HOH D 7 607 21 HOH HOH . O 7 HOH D 8 608 12 HOH HOH . O 7 HOH D 9 609 15 HOH HOH . O 7 HOH D 10 610 102 HOH HOH . O 7 HOH D 11 611 1 HOH HOH . O 7 HOH D 12 612 241 HOH HOH . O 7 HOH D 13 613 256 HOH HOH . O 7 HOH D 14 614 67 HOH HOH . P 7 HOH B 1 601 56 HOH HOH . P 7 HOH B 2 602 277 HOH HOH . P 7 HOH B 3 603 193 HOH HOH . P 7 HOH B 4 604 81 HOH HOH . P 7 HOH B 5 605 227 HOH HOH . P 7 HOH B 6 606 124 HOH HOH . P 7 HOH B 7 607 16 HOH HOH . P 7 HOH B 8 608 1 HOH HOH . P 7 HOH B 9 609 107 HOH HOH . P 7 HOH B 10 610 9 HOH HOH . P 7 HOH B 11 611 29 HOH HOH . P 7 HOH B 12 612 11 HOH HOH . P 7 HOH B 13 613 34 HOH HOH . P 7 HOH B 14 614 17 HOH HOH . P 7 HOH B 15 615 164 HOH HOH . P 7 HOH B 16 616 303 HOH HOH . P 7 HOH B 17 617 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F32 33Y . . . I 5 -27.219 -4.973 11.801 1 26.28 ? F32 33Y 501 A 1 HETATM 2 C C24 33Y . . . I 5 -26.578 -4.647 10.679 1 22.69 ? C24 33Y 501 A 1 HETATM 3 C C23 33Y . . . I 5 -25.23 -4.422 10.787 1 22.12 ? C23 33Y 501 A 1 HETATM 4 F F26 33Y . . . I 5 -24.669 -4.542 11.995 1 23.06 ? F26 33Y 501 A 1 HETATM 5 C C22 33Y . . . I 5 -24.505 -4.091 9.674 1 21.62 ? C22 33Y 501 A 1 HETATM 6 C C21 33Y . . . I 5 -25.182 -3.987 8.453 1 21.81 ? C21 33Y 501 A 1 HETATM 7 C C25 33Y . . . I 5 -27.264 -4.555 9.486 1 21.46 ? C25 33Y 501 A 1 HETATM 8 C C20 33Y . . . I 5 -26.561 -4.212 8.35 1 21.14 ? C20 33Y 501 A 1 HETATM 9 C C18 33Y . . . I 5 -27.24 -4.088 7.007 1 20.04 ? C18 33Y 501 A 1 HETATM 10 O O19 33Y . . . I 5 -26.636 -4.588 6.074 1 19.44 ? O19 33Y 501 A 1 HETATM 11 N N12 33Y . . . I 5 -28.433 -3.474 6.799 1 19.12 ? N12 33Y 501 A 1 HETATM 12 C C13 33Y . . . I 5 -29.11 -3.629 5.517 1 18.6 ? C13 33Y 501 A 1 HETATM 13 C C14 33Y . . . I 5 -30.25 -4.555 5.206 1 18.15 ? C14 33Y 501 A 1 HETATM 14 C C27 33Y . . . I 5 -29.9 -6.009 5.462 1 17.97 ? C27 33Y 501 A 1 HETATM 15 C C28 33Y . . . I 5 -30.478 -4.27 3.716 1 18.19 ? C28 33Y 501 A 1 HETATM 16 C C9 33Y . . . I 5 -31.389 -4.046 6.017 1 17.51 ? C9 33Y 501 A 1 HETATM 17 C C5 33Y . . . I 5 -32.699 -4.413 5.704 1 17.21 ? C5 33Y 501 A 1 HETATM 18 C C6 33Y . . . I 5 -33.302 -5.236 4.732 1 17.61 ? C6 33Y 501 A 1 HETATM 19 C C1 33Y . . . I 5 -34.687 -5.393 4.67 1 17.66 ? C1 33Y 501 A 1 HETATM 20 C C11 33Y . . . I 5 -28.955 -2.667 7.672 1 18.74 ? C11 33Y 501 A 1 HETATM 21 C C10 33Y . . . I 5 -30.284 -2.483 7.928 1 18.65 ? C10 33Y 501 A 1 HETATM 22 C C15 33Y . . . I 5 -30.663 -1.592 9.076 1 20.22 ? C15 33Y 501 A 1 HETATM 23 O O17 33Y . . . I 5 -29.975 -1.469 10.395 1 23.3 ? O17 33Y 501 A 1 HETATM 24 C C29 33Y . . . I 5 -29.468 -0.193 10.832 1 23.72 ? C29 33Y 501 A 1 HETATM 25 C C31 33Y . . . I 5 -28.396 0.337 9.901 1 25.27 ? C31 33Y 501 A 1 HETATM 26 C C30 33Y . . . I 5 -30.508 0.903 10.865 1 24.05 ? C30 33Y 501 A 1 HETATM 27 O O16 33Y . . . I 5 -31.661 -0.909 8.963 1 19.47 ? O16 33Y 501 A 1 HETATM 28 C C8 33Y . . . I 5 -31.433 -3.096 7.148 1 17.9 ? C8 33Y 501 A 1 HETATM 29 N N7 33Y . . . I 5 -32.733 -3.028 7.457 1 17.9 ? N7 33Y 501 A 1 HETATM 30 C C4 33Y . . . I 5 -33.494 -3.758 6.62 1 17.51 ? C4 33Y 501 A 1 HETATM 31 C C3 33Y . . . I 5 -34.874 -3.937 6.579 1 17.72 ? C3 33Y 501 A 1 HETATM 32 C C2 33Y . . . I 5 -35.474 -4.741 5.605 1 17.9 ? C2 33Y 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 39 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #