data_5Z1C # _model_server_result.job_id xjPjq8fAL5eHPzBRo9bhug _model_server_result.datetime_utc '2024-11-21 23:34:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5z1c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5Z1C # _exptl.entry_id 5Z1C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 233.05 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(4-iodophenyl)methanamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5Z1C _cell.length_a 120.503 _cell.length_b 120.503 _cell.length_c 42.719 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z1C _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 U CYS 42 1_555 A SG CYS 47 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 39 U CYS 50 1_555 A SG CYS 110 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 A SG CYS 135 U CYS 136 1_555 A SG CYS 204 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 167 U CYS 168 1_555 A SG CYS 183 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 A SG CYS 194 U CYS 191 1_555 A SG CYS 222 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? # _chem_comp.formula 'C7 H8 I N' _chem_comp.formula_weight 233.05 _chem_comp.id ZXI _chem_comp.mon_nstd_flag . _chem_comp.name 1-(4-iodophenyl)methanamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 4-Iodobenzylamine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C3 ZXI doub 376 n y C4 C5 ZXI sing 377 n y C3 C2 ZXI sing 378 n y I14 C5 ZXI sing 379 n n N15 C1 ZXI sing 380 n n C5 C6 ZXI doub 381 n y C2 C1 ZXI sing 382 n n C2 C7 ZXI doub 383 n y C6 C7 ZXI sing 384 n y C1 H1 ZXI sing 385 n n C1 H2 ZXI sing 386 n n C3 H3 ZXI sing 387 n n C4 H4 ZXI sing 388 n n C6 H5 ZXI sing 389 n n C7 H6 ZXI sing 390 n n N15 H7 ZXI sing 391 n n N15 H8 ZXI sing 392 n n # _atom_sites.entry_id 5Z1C _atom_sites.fract_transf_matrix[1][1] 0.008299 _atom_sites.fract_transf_matrix[1][2] 0.004791 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009582 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023409 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZXI U 1 301 1 ZXI ZXI . C 3 HOH U 1 401 146 HOH HOH . C 3 HOH U 2 402 94 HOH HOH . C 3 HOH U 3 403 76 HOH HOH . C 3 HOH U 4 404 143 HOH HOH . C 3 HOH U 5 405 155 HOH HOH . C 3 HOH U 6 406 54 HOH HOH . C 3 HOH U 7 407 82 HOH HOH . C 3 HOH U 8 408 25 HOH HOH . C 3 HOH U 9 409 113 HOH HOH . C 3 HOH U 10 410 38 HOH HOH . C 3 HOH U 11 411 80 HOH HOH . C 3 HOH U 12 412 127 HOH HOH . C 3 HOH U 13 413 106 HOH HOH . C 3 HOH U 14 414 60 HOH HOH . C 3 HOH U 15 415 34 HOH HOH . C 3 HOH U 16 416 28 HOH HOH . C 3 HOH U 17 417 116 HOH HOH . C 3 HOH U 18 418 152 HOH HOH . C 3 HOH U 19 419 8 HOH HOH . C 3 HOH U 20 420 20 HOH HOH . C 3 HOH U 21 421 40 HOH HOH . C 3 HOH U 22 422 140 HOH HOH . C 3 HOH U 23 423 24 HOH HOH . C 3 HOH U 24 424 52 HOH HOH . C 3 HOH U 25 425 7 HOH HOH . C 3 HOH U 26 426 115 HOH HOH . C 3 HOH U 27 427 16 HOH HOH . C 3 HOH U 28 428 21 HOH HOH . C 3 HOH U 29 429 83 HOH HOH . C 3 HOH U 30 430 111 HOH HOH . C 3 HOH U 31 431 56 HOH HOH . C 3 HOH U 32 432 51 HOH HOH . C 3 HOH U 33 433 15 HOH HOH . C 3 HOH U 34 434 153 HOH HOH . C 3 HOH U 35 435 10 HOH HOH . C 3 HOH U 36 436 81 HOH HOH . C 3 HOH U 37 437 35 HOH HOH . C 3 HOH U 38 438 147 HOH HOH . C 3 HOH U 39 439 95 HOH HOH . C 3 HOH U 40 440 17 HOH HOH . C 3 HOH U 41 441 45 HOH HOH . C 3 HOH U 42 442 119 HOH HOH . C 3 HOH U 43 443 47 HOH HOH . C 3 HOH U 44 444 135 HOH HOH . C 3 HOH U 45 445 112 HOH HOH . C 3 HOH U 46 446 26 HOH HOH . C 3 HOH U 47 447 66 HOH HOH . C 3 HOH U 48 448 123 HOH HOH . C 3 HOH U 49 449 61 HOH HOH . C 3 HOH U 50 450 161 HOH HOH . C 3 HOH U 51 451 18 HOH HOH . C 3 HOH U 52 452 9 HOH HOH . C 3 HOH U 53 453 37 HOH HOH . C 3 HOH U 54 454 142 HOH HOH . C 3 HOH U 55 455 50 HOH HOH . C 3 HOH U 56 456 131 HOH HOH . C 3 HOH U 57 457 29 HOH HOH . C 3 HOH U 58 458 11 HOH HOH . C 3 HOH U 59 459 5 HOH HOH . C 3 HOH U 60 460 118 HOH HOH . C 3 HOH U 61 461 2 HOH HOH . C 3 HOH U 62 462 68 HOH HOH . C 3 HOH U 63 463 36 HOH HOH . C 3 HOH U 64 464 31 HOH HOH . C 3 HOH U 65 465 158 HOH HOH . C 3 HOH U 66 466 3 HOH HOH . C 3 HOH U 67 467 91 HOH HOH . C 3 HOH U 68 468 136 HOH HOH . C 3 HOH U 69 469 96 HOH HOH . C 3 HOH U 70 470 4 HOH HOH . C 3 HOH U 71 471 14 HOH HOH . C 3 HOH U 72 472 86 HOH HOH . C 3 HOH U 73 473 92 HOH HOH . C 3 HOH U 74 474 63 HOH HOH . C 3 HOH U 75 475 125 HOH HOH . C 3 HOH U 76 476 84 HOH HOH . C 3 HOH U 77 477 93 HOH HOH . C 3 HOH U 78 478 43 HOH HOH . C 3 HOH U 79 479 44 HOH HOH . C 3 HOH U 80 480 33 HOH HOH . C 3 HOH U 81 481 48 HOH HOH . C 3 HOH U 82 482 71 HOH HOH . C 3 HOH U 83 483 99 HOH HOH . C 3 HOH U 84 484 141 HOH HOH . C 3 HOH U 85 485 39 HOH HOH . C 3 HOH U 86 486 64 HOH HOH . C 3 HOH U 87 487 126 HOH HOH . C 3 HOH U 88 488 41 HOH HOH . C 3 HOH U 89 489 151 HOH HOH . C 3 HOH U 90 490 107 HOH HOH . C 3 HOH U 91 491 90 HOH HOH . C 3 HOH U 92 492 150 HOH HOH . C 3 HOH U 93 493 129 HOH HOH . C 3 HOH U 94 494 70 HOH HOH . C 3 HOH U 95 495 75 HOH HOH . C 3 HOH U 96 496 27 HOH HOH . C 3 HOH U 97 497 109 HOH HOH . C 3 HOH U 98 498 57 HOH HOH . C 3 HOH U 99 499 55 HOH HOH . C 3 HOH U 100 500 22 HOH HOH . C 3 HOH U 101 501 73 HOH HOH . C 3 HOH U 102 502 137 HOH HOH . C 3 HOH U 103 503 130 HOH HOH . C 3 HOH U 104 504 32 HOH HOH . C 3 HOH U 105 505 138 HOH HOH . C 3 HOH U 106 506 149 HOH HOH . C 3 HOH U 107 507 19 HOH HOH . C 3 HOH U 108 508 42 HOH HOH . C 3 HOH U 109 509 23 HOH HOH . C 3 HOH U 110 510 108 HOH HOH . C 3 HOH U 111 511 114 HOH HOH . C 3 HOH U 112 512 145 HOH HOH . C 3 HOH U 113 513 104 HOH HOH . C 3 HOH U 114 514 122 HOH HOH . C 3 HOH U 115 515 102 HOH HOH . C 3 HOH U 116 516 120 HOH HOH . C 3 HOH U 117 517 13 HOH HOH . C 3 HOH U 118 518 128 HOH HOH . C 3 HOH U 119 519 6 HOH HOH . C 3 HOH U 120 520 134 HOH HOH . C 3 HOH U 121 521 12 HOH HOH . C 3 HOH U 122 522 124 HOH HOH . C 3 HOH U 123 523 78 HOH HOH . C 3 HOH U 124 524 67 HOH HOH . C 3 HOH U 125 525 89 HOH HOH . C 3 HOH U 126 526 62 HOH HOH . C 3 HOH U 127 527 159 HOH HOH . C 3 HOH U 128 528 85 HOH HOH . C 3 HOH U 129 529 103 HOH HOH . C 3 HOH U 130 530 110 HOH HOH . C 3 HOH U 131 531 1 HOH HOH . C 3 HOH U 132 532 49 HOH HOH . C 3 HOH U 133 533 65 HOH HOH . C 3 HOH U 134 534 88 HOH HOH . C 3 HOH U 135 535 87 HOH HOH . C 3 HOH U 136 536 154 HOH HOH . C 3 HOH U 137 537 77 HOH HOH . C 3 HOH U 138 538 160 HOH HOH . C 3 HOH U 139 539 144 HOH HOH . C 3 HOH U 140 540 133 HOH HOH . C 3 HOH U 141 541 101 HOH HOH . C 3 HOH U 142 542 69 HOH HOH . C 3 HOH U 143 543 148 HOH HOH . C 3 HOH U 144 544 139 HOH HOH . C 3 HOH U 145 545 59 HOH HOH . C 3 HOH U 146 546 79 HOH HOH . C 3 HOH U 147 547 156 HOH HOH . C 3 HOH U 148 548 46 HOH HOH . C 3 HOH U 149 549 132 HOH HOH . C 3 HOH U 150 550 121 HOH HOH . C 3 HOH U 151 551 58 HOH HOH . C 3 HOH U 152 552 30 HOH HOH . C 3 HOH U 153 553 97 HOH HOH . C 3 HOH U 154 554 72 HOH HOH . C 3 HOH U 155 555 105 HOH HOH . C 3 HOH U 156 556 117 HOH HOH . C 3 HOH U 157 557 100 HOH HOH . C 3 HOH U 158 558 98 HOH HOH . C 3 HOH U 159 559 157 HOH HOH . C 3 HOH U 160 560 53 HOH HOH . C 3 HOH U 161 561 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ZXI . . . B 2 32.782 17.813 4.13 1 36.23 ? C1 ZXI 301 U 1 HETATM 2 C C2 ZXI . . . B 2 31.415 17.245 3.961 1 31.04 ? C2 ZXI 301 U 1 HETATM 3 C C3 ZXI . . . B 2 30.99 16.872 2.685 1 42.04 ? C3 ZXI 301 U 1 HETATM 4 C C4 ZXI . . . B 2 29.723 16.353 2.495 1 47.83 ? C4 ZXI 301 U 1 HETATM 5 C C5 ZXI . . . B 2 28.895 16.222 3.592 1 34.37 ? C5 ZXI 301 U 1 HETATM 6 C C6 ZXI . . . B 2 29.3 16.611 4.861 1 31.92 ? C6 ZXI 301 U 1 HETATM 7 C C7 ZXI . . . B 2 30.57 17.126 5.055 1 28.69 ? C7 ZXI 301 U 1 HETATM 8 I I14 ZXI . . . B 2 26.986 15.471 3.318 0.5 30.13 ? I14 ZXI 301 U 1 HETATM 9 N N15 ZXI . . . B 2 33.797 17.072 3.34 1 37.98 ? N15 ZXI 301 U 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #