data_5Z1N
#
_model_server_result.job_id            U5xrrZRpWmA-_ioWlSMeBg 
_model_server_result.datetime_utc      '2024-11-18 03:49:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5z1n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
#
_entry.id    5Z1N 
#
_exptl.entry_id    5Z1N 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5Z1N 
_cell.length_a            33.318 
_cell.length_b            44.143 
_cell.length_c            96.637 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5Z1N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASP 61 A ASP 203 1_555 D NA NA . A NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc2 D NA NA . A NA 403 1_555 E O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     5Z1N 
_atom_sites.fract_transf_matrix[1][1]    0.030014 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022654 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010348 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PEF A 1 401 1 PEF PEF . 
C 3 LHG A 1 402 2 LHG LHG . 
D 4 NA A 1 403 1 NA NA . 
E 5 HOH A 1 501 29 HOH HOH . 
E 5 HOH A 2 502 86 HOH HOH . 
E 5 HOH A 3 503 110 HOH HOH . 
E 5 HOH A 4 504 102 HOH HOH . 
E 5 HOH A 5 505 103 HOH HOH . 
E 5 HOH A 6 506 99 HOH HOH . 
E 5 HOH A 7 507 9 HOH HOH . 
E 5 HOH A 8 508 45 HOH HOH . 
E 5 HOH A 9 509 50 HOH HOH . 
E 5 HOH A 10 510 80 HOH HOH . 
E 5 HOH A 11 511 105 HOH HOH . 
E 5 HOH A 12 512 108 HOH HOH . 
E 5 HOH A 13 513 28 HOH HOH . 
E 5 HOH A 14 514 25 HOH HOH . 
E 5 HOH A 15 515 76 HOH HOH . 
E 5 HOH A 16 516 92 HOH HOH . 
E 5 HOH A 17 517 100 HOH HOH . 
E 5 HOH A 18 518 46 HOH HOH . 
E 5 HOH A 19 519 94 HOH HOH . 
E 5 HOH A 20 520 85 HOH HOH . 
E 5 HOH A 21 521 71 HOH HOH . 
E 5 HOH A 22 522 30 HOH HOH . 
E 5 HOH A 23 523 52 HOH HOH . 
E 5 HOH A 24 524 63 HOH HOH . 
E 5 HOH A 25 525 1 HOH HOH . 
E 5 HOH A 26 526 83 HOH HOH . 
E 5 HOH A 27 527 24 HOH HOH . 
E 5 HOH A 28 528 72 HOH HOH . 
E 5 HOH A 29 529 21 HOH HOH . 
E 5 HOH A 30 530 13 HOH HOH . 
E 5 HOH A 31 531 66 HOH HOH . 
E 5 HOH A 32 532 22 HOH HOH . 
E 5 HOH A 33 533 81 HOH HOH . 
E 5 HOH A 34 534 20 HOH HOH . 
E 5 HOH A 35 535 16 HOH HOH . 
E 5 HOH A 36 536 6 HOH HOH . 
E 5 HOH A 37 537 34 HOH HOH . 
E 5 HOH A 38 538 41 HOH HOH . 
E 5 HOH A 39 539 36 HOH HOH . 
E 5 HOH A 40 540 17 HOH HOH . 
E 5 HOH A 41 541 74 HOH HOH . 
E 5 HOH A 42 542 59 HOH HOH . 
E 5 HOH A 43 543 11 HOH HOH . 
E 5 HOH A 44 544 57 HOH HOH . 
E 5 HOH A 45 545 7 HOH HOH . 
E 5 HOH A 46 546 60 HOH HOH . 
E 5 HOH A 47 547 32 HOH HOH . 
E 5 HOH A 48 548 33 HOH HOH . 
E 5 HOH A 49 549 47 HOH HOH . 
E 5 HOH A 50 550 18 HOH HOH . 
E 5 HOH A 51 551 79 HOH HOH . 
E 5 HOH A 52 552 73 HOH HOH . 
E 5 HOH A 53 553 4 HOH HOH . 
E 5 HOH A 54 554 65 HOH HOH . 
E 5 HOH A 55 555 109 HOH HOH . 
E 5 HOH A 56 556 43 HOH HOH . 
E 5 HOH A 57 557 58 HOH HOH . 
E 5 HOH A 58 558 48 HOH HOH . 
E 5 HOH A 59 559 37 HOH HOH . 
E 5 HOH A 60 560 62 HOH HOH . 
E 5 HOH A 61 561 40 HOH HOH . 
E 5 HOH A 62 562 67 HOH HOH . 
E 5 HOH A 63 563 98 HOH HOH . 
E 5 HOH A 64 564 8 HOH HOH . 
E 5 HOH A 65 565 23 HOH HOH . 
E 5 HOH A 66 566 26 HOH HOH . 
E 5 HOH A 67 567 44 HOH HOH . 
E 5 HOH A 68 568 53 HOH HOH . 
E 5 HOH A 69 569 31 HOH HOH . 
E 5 HOH A 70 570 51 HOH HOH . 
E 5 HOH A 71 571 27 HOH HOH . 
E 5 HOH A 72 572 14 HOH HOH . 
E 5 HOH A 73 573 5 HOH HOH . 
E 5 HOH A 74 574 19 HOH HOH . 
E 5 HOH A 75 575 2 HOH HOH . 
E 5 HOH A 76 576 87 HOH HOH . 
E 5 HOH A 77 577 77 HOH HOH . 
E 5 HOH A 78 578 42 HOH HOH . 
E 5 HOH A 79 579 3 HOH HOH . 
E 5 HOH A 80 580 70 HOH HOH . 
E 5 HOH A 81 581 54 HOH HOH . 
E 5 HOH A 82 582 93 HOH HOH . 
E 5 HOH A 83 583 15 HOH HOH . 
E 5 HOH A 84 584 64 HOH HOH . 
E 5 HOH A 85 585 49 HOH HOH . 
E 5 HOH A 86 586 12 HOH HOH . 
E 5 HOH A 87 587 35 HOH HOH . 
E 5 HOH A 88 588 55 HOH HOH . 
E 5 HOH A 89 589 82 HOH HOH . 
E 5 HOH A 90 590 38 HOH HOH . 
E 5 HOH A 91 591 68 HOH HOH . 
E 5 HOH A 92 592 88 HOH HOH . 
E 5 HOH A 93 593 56 HOH HOH . 
E 5 HOH A 94 594 84 HOH HOH . 
E 5 HOH A 95 595 97 HOH HOH . 
E 5 HOH A 96 596 78 HOH HOH . 
E 5 HOH A 97 597 10 HOH HOH . 
E 5 HOH A 98 598 75 HOH HOH . 
E 5 HOH A 99 599 96 HOH HOH . 
E 5 HOH A 100 600 101 HOH HOH . 
E 5 HOH A 101 601 39 HOH HOH . 
E 5 HOH A 102 602 106 HOH HOH . 
E 5 HOH A 103 603 61 HOH HOH . 
E 5 HOH A 104 604 107 HOH HOH . 
E 5 HOH A 105 605 90 HOH HOH . 
E 5 HOH A 106 606 69 HOH HOH . 
E 5 HOH A 107 607 95 HOH HOH . 
E 5 HOH A 108 608 91 HOH HOH . 
E 5 HOH A 109 609 104 HOH HOH . 
E 5 HOH A 110 610 89 HOH HOH . 
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_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               22.101 
_atom_site.Cartn_y               46.184 
_atom_site.Cartn_z               113.506 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        36.32 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           403 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#