data_5Z1Z # _model_server_result.job_id DD58rqiRHGQKnI4aBoJ9hw _model_server_result.datetime_utc '2024-11-17 13:15:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5z1z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 5Z1Z # _exptl.entry_id 5Z1Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Z1Z _cell.length_a 139.6 _cell.length_b 150.49 _cell.length_c 62.76 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z1Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 21 A GLU 21 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc2 E MG MG . A MG 401 1_555 G O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc3 E MG MG . A MG 401 1_555 G O HOH . A HOH 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc4 E MG MG . A MG 401 1_555 G O HOH . A HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.876 ? metalc ? metalc5 E MG MG . A MG 401 1_555 I O HOH . C HOH 401 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc6 E MG MG . A MG 401 1_555 I O HOH . C HOH 406 4_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 237 n n C1 C2 PEG sing 238 n n C1 H11 PEG sing 239 n n C1 H12 PEG sing 240 n n O1 HO1 PEG sing 241 n n C2 O2 PEG sing 242 n n C2 H21 PEG sing 243 n n C2 H22 PEG sing 244 n n O2 C3 PEG sing 245 n n C3 C4 PEG sing 246 n n C3 H31 PEG sing 247 n n C3 H32 PEG sing 248 n n C4 O4 PEG sing 249 n n C4 H41 PEG sing 250 n n C4 H42 PEG sing 251 n n O4 HO4 PEG sing 252 n n # _atom_sites.entry_id 5Z1Z _atom_sites.fract_transf_matrix[1][1] 0.007163 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006645 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015934 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 401 1 MG MG . F 3 PEG A 1 402 1 PEG PEG . G 4 HOH A 1 501 122 HOH HOH . G 4 HOH A 2 502 50 HOH HOH . G 4 HOH A 3 503 44 HOH HOH . G 4 HOH A 4 504 25 HOH HOH . G 4 HOH A 5 505 6 HOH HOH . G 4 HOH A 6 506 76 HOH HOH . G 4 HOH A 7 507 53 HOH HOH . G 4 HOH A 8 508 86 HOH HOH . G 4 HOH A 9 509 63 HOH HOH . G 4 HOH A 10 510 96 HOH HOH . G 4 HOH A 11 511 27 HOH HOH . G 4 HOH A 12 512 48 HOH HOH . G 4 HOH A 13 513 71 HOH HOH . G 4 HOH A 14 514 29 HOH HOH . G 4 HOH A 15 515 126 HOH HOH . G 4 HOH A 16 516 31 HOH HOH . G 4 HOH A 17 517 35 HOH HOH . G 4 HOH A 18 518 127 HOH HOH . G 4 HOH A 19 519 140 HOH HOH . G 4 HOH A 20 520 3 HOH HOH . G 4 HOH A 21 521 70 HOH HOH . G 4 HOH A 22 522 145 HOH HOH . G 4 HOH A 23 523 30 HOH HOH . G 4 HOH A 24 524 38 HOH HOH . G 4 HOH A 25 525 88 HOH HOH . G 4 HOH A 26 526 14 HOH HOH . G 4 HOH A 27 527 15 HOH HOH . G 4 HOH A 28 528 56 HOH HOH . G 4 HOH A 29 529 69 HOH HOH . G 4 HOH A 30 530 43 HOH HOH . G 4 HOH A 31 531 24 HOH HOH . G 4 HOH A 32 532 18 HOH HOH . G 4 HOH A 33 533 68 HOH HOH . G 4 HOH A 34 534 89 HOH HOH . G 4 HOH A 35 535 13 HOH HOH . G 4 HOH A 36 536 87 HOH HOH . G 4 HOH A 37 537 8 HOH HOH . G 4 HOH A 38 538 143 HOH HOH . G 4 HOH A 39 539 73 HOH HOH . G 4 HOH A 40 540 124 HOH HOH . G 4 HOH A 41 541 67 HOH HOH . G 4 HOH A 42 542 5 HOH HOH . G 4 HOH A 43 543 93 HOH HOH . G 4 HOH A 44 544 95 HOH HOH . G 4 HOH A 45 545 81 HOH HOH . G 4 HOH A 46 546 94 HOH HOH . G 4 HOH A 47 547 123 HOH HOH . H 4 HOH B 1 401 101 HOH HOH . H 4 HOH B 2 402 49 HOH HOH . H 4 HOH B 3 403 100 HOH HOH . H 4 HOH B 4 404 99 HOH HOH . H 4 HOH B 5 405 28 HOH HOH . H 4 HOH B 6 406 85 HOH HOH . H 4 HOH B 7 407 144 HOH HOH . H 4 HOH B 8 408 33 HOH HOH . H 4 HOH B 9 409 59 HOH HOH . H 4 HOH B 10 410 120 HOH HOH . H 4 HOH B 11 411 2 HOH HOH . H 4 HOH B 12 412 75 HOH HOH . H 4 HOH B 13 413 10 HOH HOH . H 4 HOH B 14 414 141 HOH HOH . H 4 HOH B 15 415 7 HOH HOH . H 4 HOH B 16 416 51 HOH HOH . H 4 HOH B 17 417 65 HOH HOH . H 4 HOH B 18 418 54 HOH HOH . H 4 HOH B 19 419 34 HOH HOH . H 4 HOH B 20 420 98 HOH HOH . H 4 HOH B 21 421 21 HOH HOH . H 4 HOH B 22 422 20 HOH HOH . H 4 HOH B 23 423 55 HOH HOH . H 4 HOH B 24 424 19 HOH HOH . H 4 HOH B 25 425 57 HOH HOH . H 4 HOH B 26 426 39 HOH HOH . H 4 HOH B 27 427 117 HOH HOH . H 4 HOH B 28 428 80 HOH HOH . H 4 HOH B 29 429 4 HOH HOH . H 4 HOH B 30 430 52 HOH HOH . H 4 HOH B 31 431 102 HOH HOH . H 4 HOH B 32 432 119 HOH HOH . H 4 HOH B 33 433 40 HOH HOH . H 4 HOH B 34 434 22 HOH HOH . H 4 HOH B 35 435 78 HOH HOH . H 4 HOH B 36 436 9 HOH HOH . H 4 HOH B 37 437 72 HOH HOH . H 4 HOH B 38 438 97 HOH HOH . H 4 HOH B 39 439 62 HOH HOH . H 4 HOH B 40 440 47 HOH HOH . H 4 HOH B 41 441 90 HOH HOH . I 4 HOH C 1 401 92 HOH HOH . I 4 HOH C 2 402 107 HOH HOH . I 4 HOH C 3 403 142 HOH HOH . I 4 HOH C 4 404 129 HOH HOH . I 4 HOH C 5 405 17 HOH HOH . I 4 HOH C 6 406 1 HOH HOH . I 4 HOH C 7 407 135 HOH HOH . I 4 HOH C 8 408 32 HOH HOH . I 4 HOH C 9 409 121 HOH HOH . I 4 HOH C 10 410 103 HOH HOH . I 4 HOH C 11 411 132 HOH HOH . I 4 HOH C 12 412 133 HOH HOH . I 4 HOH C 13 413 148 HOH HOH . I 4 HOH C 14 414 26 HOH HOH . I 4 HOH C 15 415 84 HOH HOH . I 4 HOH C 16 416 104 HOH HOH . I 4 HOH C 17 417 136 HOH HOH . I 4 HOH C 18 418 130 HOH HOH . I 4 HOH C 19 419 137 HOH HOH . I 4 HOH C 20 420 138 HOH HOH . I 4 HOH C 21 421 108 HOH HOH . I 4 HOH C 22 422 64 HOH HOH . I 4 HOH C 23 423 82 HOH HOH . I 4 HOH C 24 424 128 HOH HOH . I 4 HOH C 25 425 105 HOH HOH . I 4 HOH C 26 426 139 HOH HOH . I 4 HOH C 27 427 131 HOH HOH . I 4 HOH C 28 428 134 HOH HOH . I 4 HOH C 29 429 106 HOH HOH . I 4 HOH C 30 430 118 HOH HOH . I 4 HOH C 31 431 74 HOH HOH . J 4 HOH D 1 401 60 HOH HOH . J 4 HOH D 2 402 61 HOH HOH . J 4 HOH D 3 403 112 HOH HOH . J 4 HOH D 4 404 125 HOH HOH . J 4 HOH D 5 405 11 HOH HOH . J 4 HOH D 6 406 114 HOH HOH . J 4 HOH D 7 407 36 HOH HOH . J 4 HOH D 8 408 109 HOH HOH . J 4 HOH D 9 409 58 HOH HOH . J 4 HOH D 10 410 66 HOH HOH . J 4 HOH D 11 411 83 HOH HOH . J 4 HOH D 12 412 16 HOH HOH . J 4 HOH D 13 413 116 HOH HOH . J 4 HOH D 14 414 115 HOH HOH . J 4 HOH D 15 415 147 HOH HOH . J 4 HOH D 16 416 91 HOH HOH . J 4 HOH D 17 417 46 HOH HOH . J 4 HOH D 18 418 12 HOH HOH . J 4 HOH D 19 419 79 HOH HOH . J 4 HOH D 20 420 37 HOH HOH . J 4 HOH D 21 421 41 HOH HOH . J 4 HOH D 22 422 42 HOH HOH . J 4 HOH D 23 423 77 HOH HOH . J 4 HOH D 24 424 111 HOH HOH . J 4 HOH D 25 425 23 HOH HOH . J 4 HOH D 26 426 45 HOH HOH . J 4 HOH D 27 427 110 HOH HOH . J 4 HOH D 28 428 146 HOH HOH . J 4 HOH D 29 429 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . F 3 76.958 33.392 22.942 1 50.17 ? C1 PEG 402 A 1 HETATM 2 O O1 PEG . . . F 3 76.287 32.24 22.451 1 50.89 ? O1 PEG 402 A 1 HETATM 3 C C2 PEG . . . F 3 77.809 33.174 24.19 1 51.57 ? C2 PEG 402 A 1 HETATM 4 O O2 PEG . . . F 3 78.894 32.298 23.947 1 53.12 ? O2 PEG 402 A 1 HETATM 5 C C3 PEG . . . F 3 80.18 32.805 24.173 1 48.47 ? C3 PEG 402 A 1 HETATM 6 C C4 PEG . . . F 3 81.158 31.853 23.53 1 43.68 ? C4 PEG 402 A 1 HETATM 7 O O4 PEG . . . F 3 82.075 32.467 22.63 1 47.21 ? O4 PEG 402 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #