data_5Z43 # _model_server_result.job_id 2KqIgxo5s2LiFeJZWNhntA _model_server_result.datetime_utc '2024-11-28 06:21:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5z43 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5Z43 # _exptl.entry_id 5Z43 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Z43 _cell.length_a 116.263 _cell.length_b 116.263 _cell.length_c 48.723 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z43 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 41 A ASN 41 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.864 ? metalc ? metalc2 A OE1 GLU 63 A GLU 63 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? metalc ? metalc3 A OE2 GLU 63 A GLU 63 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.866 ? metalc ? metalc4 A OD2 ASP 65 A ASP 65 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? metalc ? metalc5 B OD1 ASN 41 B ASN 41 1_555 D MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.705 ? metalc ? metalc6 B OE1 GLU 63 B GLU 63 1_555 D MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5Z43 _atom_sites.fract_transf_matrix[1][1] 0.008601 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020524 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 2 MG MG . D 2 MG B 1 401 1 MG MG . E 3 HOH A 1 501 6 HOH HOH . E 3 HOH A 2 502 53 HOH HOH . E 3 HOH A 3 503 30 HOH HOH . E 3 HOH A 4 504 99 HOH HOH . E 3 HOH A 5 505 11 HOH HOH . E 3 HOH A 6 506 1 HOH HOH . E 3 HOH A 7 507 9 HOH HOH . E 3 HOH A 8 508 15 HOH HOH . E 3 HOH A 9 509 130 HOH HOH . E 3 HOH A 10 510 86 HOH HOH . E 3 HOH A 11 511 44 HOH HOH . E 3 HOH A 12 512 129 HOH HOH . E 3 HOH A 13 513 26 HOH HOH . E 3 HOH A 14 514 32 HOH HOH . E 3 HOH A 15 515 81 HOH HOH . E 3 HOH A 16 516 133 HOH HOH . E 3 HOH A 17 517 49 HOH HOH . E 3 HOH A 18 518 18 HOH HOH . E 3 HOH A 19 519 69 HOH HOH . E 3 HOH A 20 520 116 HOH HOH . E 3 HOH A 21 521 16 HOH HOH . E 3 HOH A 22 522 85 HOH HOH . E 3 HOH A 23 523 120 HOH HOH . E 3 HOH A 24 524 27 HOH HOH . E 3 HOH A 25 525 45 HOH HOH . E 3 HOH A 26 526 63 HOH HOH . E 3 HOH A 27 527 62 HOH HOH . E 3 HOH A 28 528 20 HOH HOH . E 3 HOH A 29 529 103 HOH HOH . E 3 HOH A 30 530 112 HOH HOH . E 3 HOH A 31 531 61 HOH HOH . E 3 HOH A 32 532 29 HOH HOH . E 3 HOH A 33 533 121 HOH HOH . E 3 HOH A 34 534 109 HOH HOH . E 3 HOH A 35 535 55 HOH HOH . E 3 HOH A 36 536 64 HOH HOH . E 3 HOH A 37 537 138 HOH HOH . E 3 HOH A 38 538 76 HOH HOH . E 3 HOH A 39 539 56 HOH HOH . E 3 HOH A 40 540 87 HOH HOH . E 3 HOH A 41 541 98 HOH HOH . E 3 HOH A 42 542 105 HOH HOH . E 3 HOH A 43 543 37 HOH HOH . E 3 HOH A 44 544 58 HOH HOH . E 3 HOH A 45 545 107 HOH HOH . E 3 HOH A 46 546 113 HOH HOH . F 3 HOH B 1 501 33 HOH HOH . F 3 HOH B 2 502 127 HOH HOH . F 3 HOH B 3 503 108 HOH HOH . F 3 HOH B 4 504 2 HOH HOH . F 3 HOH B 5 505 48 HOH HOH . F 3 HOH B 6 506 68 HOH HOH . F 3 HOH B 7 507 24 HOH HOH . F 3 HOH B 8 508 21 HOH HOH . F 3 HOH B 9 509 128 HOH HOH . F 3 HOH B 10 510 4 HOH HOH . F 3 HOH B 11 511 40 HOH HOH . F 3 HOH B 12 512 60 HOH HOH . F 3 HOH B 13 513 100 HOH HOH . F 3 HOH B 14 514 8 HOH HOH . F 3 HOH B 15 515 110 HOH HOH . F 3 HOH B 16 516 77 HOH HOH . F 3 HOH B 17 517 23 HOH HOH . F 3 HOH B 18 518 51 HOH HOH . F 3 HOH B 19 519 31 HOH HOH . F 3 HOH B 20 520 43 HOH HOH . F 3 HOH B 21 521 28 HOH HOH . F 3 HOH B 22 522 14 HOH HOH . F 3 HOH B 23 523 13 HOH HOH . F 3 HOH B 24 524 5 HOH HOH . F 3 HOH B 25 525 122 HOH HOH . F 3 HOH B 26 526 78 HOH HOH . F 3 HOH B 27 527 93 HOH HOH . F 3 HOH B 28 528 22 HOH HOH . F 3 HOH B 29 529 82 HOH HOH . F 3 HOH B 30 530 79 HOH HOH . F 3 HOH B 31 531 65 HOH HOH . F 3 HOH B 32 532 10 HOH HOH . F 3 HOH B 33 533 67 HOH HOH . F 3 HOH B 34 534 131 HOH HOH . F 3 HOH B 35 535 101 HOH HOH . F 3 HOH B 36 536 52 HOH HOH . F 3 HOH B 37 537 134 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 32.102 _atom_site.Cartn_y 26.848 _atom_site.Cartn_z -0.731 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 74.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #