data_5Z46 # _model_server_result.job_id wxGZjldm7ETkABp0-8UHhA _model_server_result.datetime_utc '2024-11-06 16:20:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5z46 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5Z46 # _exptl.entry_id 5Z46 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Z46 _cell.length_a 117.267 _cell.length_b 117.267 _cell.length_c 49.324 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z46 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1 B,E,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 41 A ASN 41 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc2 A OE2 GLU 63 A GLU 63 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc3 A OD1 ASP 65 A ASP 65 1_555 D MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc4 A OG1 THR 173 A THR 173 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc5 A OD1 ASN 207 A ASN 207 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? metalc ? metalc6 A O GLY 208 A GLY 208 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc7 A OE2 GLU 209 A GLU 209 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc8 C MG MG . A MG 401 1_555 I O HOH . A HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc9 C MG MG . A MG 401 1_555 I O HOH . A HOH 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc10 D MG MG . A MG 402 1_555 I O HOH . A HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc11 D MG MG . A MG 402 1_555 I O HOH . A HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc12 D MG MG . A MG 402 1_555 I O HOH . A HOH 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc13 B OD1 ASN 41 B ASN 41 1_555 F MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc14 B OE1 GLU 63 B GLU 63 1_555 F MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc15 B OD2 ASP 65 B ASP 65 1_555 F MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc16 B O GLY 208 B GLY 208 1_555 G MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? metalc ? metalc17 B OE2 GLU 209 B GLU 209 1_555 G MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? metalc ? metalc18 F MG MG . B MG 402 1_555 J O HOH . B HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc19 F MG MG . B MG 402 1_555 J O HOH . B HOH 518 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc20 F MG MG . B MG 402 1_555 J O HOH . B HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc21 G MG MG . B MG 403 1_555 J O HOH . B HOH 510 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5Z46 _atom_sites.fract_transf_matrix[1][1] 0.008528 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008528 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020274 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 3 MG MG . D 2 MG A 1 402 4 MG MG . E 3 GST B 1 401 1 GST GST . F 2 MG B 1 402 1 MG MG . G 2 MG B 1 403 2 MG MG . H 4 8XL B 1 404 1 8XL LIG . I 5 HOH A 1 501 152 HOH HOH . I 5 HOH A 2 502 110 HOH HOH . I 5 HOH A 3 503 64 HOH HOH . I 5 HOH A 4 504 42 HOH HOH . I 5 HOH A 5 505 35 HOH HOH . I 5 HOH A 6 506 23 HOH HOH . I 5 HOH A 7 507 29 HOH HOH . I 5 HOH A 8 508 8 HOH HOH . I 5 HOH A 9 509 6 HOH HOH . I 5 HOH A 10 510 188 HOH HOH . I 5 HOH A 11 511 69 HOH HOH . I 5 HOH A 12 512 7 HOH HOH . I 5 HOH A 13 513 3 HOH HOH . I 5 HOH A 14 514 39 HOH HOH . I 5 HOH A 15 515 79 HOH HOH . I 5 HOH A 16 516 132 HOH HOH . I 5 HOH A 17 517 116 HOH HOH . I 5 HOH A 18 518 54 HOH HOH . I 5 HOH A 19 519 30 HOH HOH . I 5 HOH A 20 520 111 HOH HOH . I 5 HOH A 21 521 59 HOH HOH . I 5 HOH A 22 522 66 HOH HOH . I 5 HOH A 23 523 114 HOH HOH . I 5 HOH A 24 524 55 HOH HOH . I 5 HOH A 25 525 44 HOH HOH . I 5 HOH A 26 526 172 HOH HOH . I 5 HOH A 27 527 137 HOH HOH . I 5 HOH A 28 528 15 HOH HOH . I 5 HOH A 29 529 31 HOH HOH . I 5 HOH A 30 530 72 HOH HOH . I 5 HOH A 31 531 144 HOH HOH . I 5 HOH A 32 532 41 HOH HOH . I 5 HOH A 33 533 90 HOH HOH . I 5 HOH A 34 534 139 HOH HOH . I 5 HOH A 35 535 104 HOH HOH . I 5 HOH A 36 536 118 HOH HOH . I 5 HOH A 37 537 47 HOH HOH . I 5 HOH A 38 538 109 HOH HOH . I 5 HOH A 39 539 82 HOH HOH . I 5 HOH A 40 540 76 HOH HOH . I 5 HOH A 41 541 9 HOH HOH . I 5 HOH A 42 542 18 HOH HOH . I 5 HOH A 43 543 89 HOH HOH . I 5 HOH A 44 544 65 HOH HOH . I 5 HOH A 45 545 156 HOH HOH . I 5 HOH A 46 546 61 HOH HOH . I 5 HOH A 47 547 68 HOH HOH . I 5 HOH A 48 548 14 HOH HOH . I 5 HOH A 49 549 60 HOH HOH . I 5 HOH A 50 550 115 HOH HOH . I 5 HOH A 51 551 180 HOH HOH . I 5 HOH A 52 552 154 HOH HOH . I 5 HOH A 53 553 138 HOH HOH . I 5 HOH A 54 554 93 HOH HOH . I 5 HOH A 55 555 25 HOH HOH . I 5 HOH A 56 556 4 HOH HOH . I 5 HOH A 57 557 185 HOH HOH . I 5 HOH A 58 558 98 HOH HOH . I 5 HOH A 59 559 78 HOH HOH . I 5 HOH A 60 560 20 HOH HOH . I 5 HOH A 61 561 77 HOH HOH . I 5 HOH A 62 562 73 HOH HOH . I 5 HOH A 63 563 75 HOH HOH . I 5 HOH A 64 564 168 HOH HOH . I 5 HOH A 65 565 67 HOH HOH . I 5 HOH A 66 566 43 HOH HOH . I 5 HOH A 67 567 127 HOH HOH . I 5 HOH A 68 568 80 HOH HOH . I 5 HOH A 69 569 100 HOH HOH . I 5 HOH A 70 570 50 HOH HOH . I 5 HOH A 71 571 70 HOH HOH . I 5 HOH A 72 572 131 HOH HOH . I 5 HOH A 73 573 175 HOH HOH . I 5 HOH A 74 574 71 HOH HOH . I 5 HOH A 75 575 16 HOH HOH . I 5 HOH A 76 576 17 HOH HOH . I 5 HOH A 77 577 178 HOH HOH . I 5 HOH A 78 578 162 HOH HOH . I 5 HOH A 79 579 124 HOH HOH . I 5 HOH A 80 580 147 HOH HOH . I 5 HOH A 81 581 128 HOH HOH . I 5 HOH A 82 582 103 HOH HOH . I 5 HOH A 83 583 88 HOH HOH . I 5 HOH A 84 584 141 HOH HOH . I 5 HOH A 85 585 133 HOH HOH . I 5 HOH A 86 586 106 HOH HOH . I 5 HOH A 87 587 148 HOH HOH . I 5 HOH A 88 588 45 HOH HOH . I 5 HOH A 89 589 28 HOH HOH . I 5 HOH A 90 590 136 HOH HOH . I 5 HOH A 91 591 186 HOH HOH . I 5 HOH A 92 592 126 HOH HOH . J 5 HOH B 1 501 121 HOH HOH . J 5 HOH B 2 502 122 HOH HOH . J 5 HOH B 3 503 184 HOH HOH . J 5 HOH B 4 504 165 HOH HOH . J 5 HOH B 5 505 169 HOH HOH . J 5 HOH B 6 506 92 HOH HOH . J 5 HOH B 7 507 32 HOH HOH . J 5 HOH B 8 508 143 HOH HOH . J 5 HOH B 9 509 40 HOH HOH . J 5 HOH B 10 510 187 HOH HOH . J 5 HOH B 11 511 63 HOH HOH . J 5 HOH B 12 512 10 HOH HOH . J 5 HOH B 13 513 170 HOH HOH . J 5 HOH B 14 514 74 HOH HOH . J 5 HOH B 15 515 83 HOH HOH . J 5 HOH B 16 516 51 HOH HOH . J 5 HOH B 17 517 146 HOH HOH . J 5 HOH B 18 518 24 HOH HOH . J 5 HOH B 19 519 1 HOH HOH . J 5 HOH B 20 520 97 HOH HOH . J 5 HOH B 21 521 52 HOH HOH . J 5 HOH B 22 522 2 HOH HOH . J 5 HOH B 23 523 22 HOH HOH . J 5 HOH B 24 524 120 HOH HOH . J 5 HOH B 25 525 5 HOH HOH . J 5 HOH B 26 526 46 HOH HOH . J 5 HOH B 27 527 155 HOH HOH . J 5 HOH B 28 528 62 HOH HOH . J 5 HOH B 29 529 129 HOH HOH . J 5 HOH B 30 530 38 HOH HOH . J 5 HOH B 31 531 125 HOH HOH . J 5 HOH B 32 532 123 HOH HOH . J 5 HOH B 33 533 101 HOH HOH . J 5 HOH B 34 534 145 HOH HOH . J 5 HOH B 35 535 33 HOH HOH . J 5 HOH B 36 536 37 HOH HOH . J 5 HOH B 37 537 117 HOH HOH . J 5 HOH B 38 538 87 HOH HOH . J 5 HOH B 39 539 13 HOH HOH . J 5 HOH B 40 540 160 HOH HOH . J 5 HOH B 41 541 182 HOH HOH . J 5 HOH B 42 542 19 HOH HOH . J 5 HOH B 43 543 53 HOH HOH . J 5 HOH B 44 544 140 HOH HOH . J 5 HOH B 45 545 85 HOH HOH . J 5 HOH B 46 546 56 HOH HOH . J 5 HOH B 47 547 91 HOH HOH . J 5 HOH B 48 548 36 HOH HOH . J 5 HOH B 49 549 108 HOH HOH . J 5 HOH B 50 550 105 HOH HOH . J 5 HOH B 51 551 181 HOH HOH . J 5 HOH B 52 552 102 HOH HOH . J 5 HOH B 53 553 81 HOH HOH . J 5 HOH B 54 554 171 HOH HOH . J 5 HOH B 55 555 11 HOH HOH . J 5 HOH B 56 556 12 HOH HOH . J 5 HOH B 57 557 27 HOH HOH . J 5 HOH B 58 558 58 HOH HOH . J 5 HOH B 59 559 134 HOH HOH . J 5 HOH B 60 560 151 HOH HOH . J 5 HOH B 61 561 48 HOH HOH . J 5 HOH B 62 562 179 HOH HOH . J 5 HOH B 63 563 142 HOH HOH . J 5 HOH B 64 564 49 HOH HOH . J 5 HOH B 65 565 96 HOH HOH . J 5 HOH B 66 566 94 HOH HOH . J 5 HOH B 67 567 173 HOH HOH . J 5 HOH B 68 568 84 HOH HOH . J 5 HOH B 69 569 130 HOH HOH . J 5 HOH B 70 570 149 HOH HOH . J 5 HOH B 71 571 163 HOH HOH . J 5 HOH B 72 572 166 HOH HOH . J 5 HOH B 73 573 177 HOH HOH . J 5 HOH B 74 574 164 HOH HOH . J 5 HOH B 75 575 167 HOH HOH . J 5 HOH B 76 576 119 HOH HOH . J 5 HOH B 77 577 86 HOH HOH . J 5 HOH B 78 578 150 HOH HOH . J 5 HOH B 79 579 26 HOH HOH . J 5 HOH B 80 580 99 HOH HOH . J 5 HOH B 81 581 174 HOH HOH . J 5 HOH B 82 582 159 HOH HOH . J 5 HOH B 83 583 113 HOH HOH . J 5 HOH B 84 584 135 HOH HOH . J 5 HOH B 85 585 95 HOH HOH . J 5 HOH B 86 586 183 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 44.446 _atom_site.Cartn_y 41.208 _atom_site.Cartn_z 2.068 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 88.88 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #